Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.2e-101 373.2 191 100.0
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 3.6e-71 271.9 189 72.0
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.8e-70 269.6 189 73.5
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 2.4e-70 269.2 191 70.7
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 4.5e-69 265.0 175 74.3
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 9.9e-69 263.8 178 72.5
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.3e-68 263.5 184 71.2
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.7e-68 263.1 194 68.6
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.9e-68 262.3 167 74.9
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 3.8e-68 261.9 192 69.3
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 4.9e-68 261.5 175 72.6
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 7.1e-67 257.7 181 66.9
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.6e-66 256.5 183 69.4
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.6e-66 256.5 190 70.0
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.7e-66 255.8 189 68.3
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.7e-66 255.8 189 68.3
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 3.5e-66 255.4 167 74.3
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 4.6e-66 255.0 193 64.8
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.8e-65 253.1 189 66.7
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 2.3e-65 252.7 209 64.6
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 3.9e-65 251.9 168 72.6
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 6.7e-65 251.1 189 67.2
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 8.7e-65 250.8 189 66.1
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 1.1e-64 250.4 192 65.6
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 1.9e-64 249.6 170 70.0
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 3.3e-64 248.8 190 67.4
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.3e-64 248.8 191 66.5
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 4.3e-64 248.4 194 65.5
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 4.3e-64 248.4 191 66.0
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 4.3e-64 248.4 189 66.7
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 5.6e-64 248.1 168 70.2
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 9.6e-64 247.3 191 67.0
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.6e-63 246.5 180 68.9
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 2.1e-63 246.1 190 65.3
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 4.8e-63 245.0 190 63.2
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 4.8e-63 245.0 190 63.2
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 8.1e-63 244.2 195 65.6
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 1.4e-62 243.4 181 67.4
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 1.4e-62 243.4 207 60.9
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 3.1e-62 242.3 175 69.1
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 3.1e-62 242.3 175 68.6
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 4.0e-62 241.9 167 70.7
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 5.3e-62 241.5 176 68.2
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 6.9e-62 241.1 189 66.1
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 6.9e-62 241.1 196 63.8
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.5e-61 240.0 188 64.4
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 2.0e-61 239.6 190 63.2
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.6e-61 239.2 189 64.0
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 2.6e-61 239.2 189 64.0
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 3.4e-61 238.8 171 67.3
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 3.4e-61 238.8 167 68.3
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 4.5e-61 238.4 166 69.9
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 4.5e-61 238.4 189 63.5
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 5.8e-61 238.0 179 64.2
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.3e-60 236.9 179 64.2
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 1.7e-60 236.5 188 64.4
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.8e-60 235.3 189 63.0
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 4.9e-60 235.0 170 68.2
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-58 230.3 158 70.9
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 1.6e-58 229.9 160 68.8
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.6e-58 229.9 158 70.3
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.6e-58 229.9 179 67.0
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.1e-58 229.6 181 65.2
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 2.7e-58 229.2 158 70.3
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 3.5e-58 228.8 158 68.4
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 6.0e-58 228.0 188 59.0
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 3.0e-57 225.7 175 66.9
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 5.1e-57 224.9 162 66.0
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 8.7e-57 224.2 179 61.5
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 1.1e-56 223.8 191 60.7
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 2.5e-56 222.6 173 64.2
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.3e-55 220.3 176 61.4
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 2.8e-55 219.2 158 67.1
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 4.8e-55 218.4 138 76.8
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 1.1e-54 217.2 187 62.6
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 3.8e-52 208.8 167 58.7
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 5.5e-51 204.9 182 57.1
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 4.6e-50 201.8 167 62.3
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.0e-49 200.7 145 66.9
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 2.3e-49 199.5 257 45.5
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 7.4e-48 194.5 161 55.9
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.1e-47 193.0 154 64.3
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 2.6e-45 186.0 161 51.6
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 2.2e-44 183.0 156 54.5
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 6.5e-44 181.4 158 57.0
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.4e-43 180.3 119 70.6
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 3.2e-43 179.1 158 55.7
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 9.3e-43 177.6 198 49.5
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.3e-41 173.7 142 63.4
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.1e-40 170.6 125 68.0
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 2.2e-39 166.4 178 54.5
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 4.1e-38 162.2 157 51.6
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 1.5e-37 160.2 125 64.0
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.0e-36 157.5 97 77.3
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.0e-36 157.5 136 60.3
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.8e-36 155.6 132 56.8
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 8.5e-36 154.5 161 47.2
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 9.4e-35 151.0 107 68.2
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 3.6e-34 149.1 179 44.7
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 8.8e-33 144.4 113 62.8
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 8.8e-33 144.4 103 66.0
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 1.1e-32 144.1 126 61.9
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 2.6e-32 142.9 99 73.7
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 3.3e-32 142.5 109 63.3
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 4.4e-32 142.1 112 61.6
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 4.8e-31 138.7 88 72.7
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 1.4e-30 137.1 98 70.4
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 2.0e-29 133.3 115 60.0
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.1e-26 121.7 131 53.4
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 1.0e-25 120.9 99 62.6
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 5.2e-25 118.6 75 80.0
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 4.5e-21 105.5 140 40.0
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 9.4e-19 97.8 79 59.5
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.4e-17 94.0 155 33.5
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.7e-15 87.0 49 87.8
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 1.1e-14 84.3 85 47.1
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 1.1e-11 74.3 50 68.0
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 5.4e-06 55.5 36 72.2


User provided reference genes

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