Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03944 Eucalyptus grandis HOM05D005868 ORTHO05D006964 2.7e-67 258.5 125 100.0
Eucgr.C04189 Eucalyptus grandis HOM05D005868 ORTHO05D006964 1.7e-56 222.6 110 98.2
Eucgr.C04191 Eucalyptus grandis HOM05D005868 ORTHO05D006964 6.3e-56 220.7 111 95.5
Gohir.A05G017300 Gossypium hirsutum HOM05D005868 ORTHO05D006964 1.6e-46 189.5 114 78.1
Gorai.009G018600 Gossypium raimondii HOM05D005868 ORTHO05D006964 1.0e-45 186.8 114 77.2
Cpa.g.sc165.3 Carica papaya HOM05D005868 ORTHO05D006964 1.3e-45 186.4 114 76.3
Gohir.D05G018200 Gossypium hirsutum HOM05D005868 ORTHO05D006964 2.9e-45 185.3 114 77.2
Duzib150G0047 Durio zibethinus HOM05D005868 ORTHO05D006964 1.1e-44 183.3 114 74.6
arahy.Tifrunner.gnm1.ann1.1Z3A91 Arachis hypogaea HOM05D005868 ORTHO05D006964 1.9e-44 182.6 114 75.4
Thecc.09G124300 Theobroma cacao HOM05D005868 ORTHO05D006964 3.2e-44 181.8 114 75.4
QL02p087973 Quercus lobata HOM05D005868 ORTHO05D006964 9.4e-44 180.3 114 75.4
QL93p0150_0012 Quercus lobata HOM05D005868 ORTHO05D006964 9.4e-44 180.3 114 75.4
Phvul.003G286500 Phaseolus vulgaris HOM05D005868 ORTHO05D006964 3.0e-42 175.3 118 72.0
VMungo0251G3516 Vigna mungo HOM05D005868 ORTHO05D006964 3.0e-42 175.3 110 77.3
THA.LOC104808997 Tarenaya hassleriana HOM05D005868 ORTHO05D006964 6.8e-42 174.1 114 73.7
Glyma.18G237200 Glycine max HOM05D005868 ORTHO05D006964 8.8e-42 173.7 118 70.3
Rhsim01G0074500 Rhododendron simsii HOM05D005868 ORTHO05D006964 1.2e-41 173.3 110 75.5
vmacro16514 Vaccinium macrocarpon HOM05D005868 ORTHO05D006964 1.2e-41 173.3 110 75.5
Ciclev10009129m.g Citrus clementina HOM05D005868 ORTHO05D006964 2.0e-41 172.6 110 73.6
Glyma.08G274300 Glycine max HOM05D005868 ORTHO05D006964 2.0e-41 172.6 118 69.5
Prupe.7G240900 Prunus persica HOM05D005868 ORTHO05D006964 2.0e-41 172.6 110 72.7
Lj3g0005718 Lotus japonicus HOM05D005868 ORTHO05D006964 2.6e-41 172.2 118 70.3
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 3.4e-41 171.8 110 71.8
Lalb_Chr12g0197851 Lupinus albus HOM05D005868 ORTHO05D006964 4.4e-41 171.4 114 73.7
Atru.chr7.1216 Acer truncatum HOM05D005868 ORTHO05D006964 5.7e-41 171.0 110 73.6
CiPaw.06G052800 Carya illinoinensis HOM05D005868 ORTHO05D006964 5.7e-41 171.0 114 71.1
MELO3C004517.2 Cucumis melo HOM05D005868 ORTHO05D006964 5.7e-41 171.0 110 73.6
Nn2g12624 Nelumbo nucifera HOM05D005868 ORTHO05D006964 7.5e-41 170.6 110 72.7
Actinidia40461 Actinidia chinensis HOM05D005868 ORTHO05D006964 1.7e-40 169.5 110 75.5
MSTRG.20108 Avicennia marina HOM05D005868 ORTHO05D006964 1.7e-40 169.5 110 71.8
CsaV3_2G002760 Cucumis sativus L. HOM05D005868 ORTHO05D006964 1.7e-40 169.5 110 72.7
FAN13G1606 Fragaria x ananassa HOM05D001017 ORTHO05D006964 2.2e-40 169.1 110 74.5
FAN18G3119 Fragaria x ananassa HOM05D005868 ORTHO05D006964 2.2e-40 169.1 110 74.5
Nitab4.5_0002556g0090 Nicotiana tabacum HOM05D005868 ORTHO05D006964 2.2e-40 169.1 110 70.9
FvH4_5g12980 Fragaria vesca HOM05D005868 ORTHO05D006964 3.7e-40 168.3 110 74.5
Medtr8g073315 Medicago truncatula HOM05D005868 ORTHO05D006964 4.8e-40 167.9 118 68.6
Solyc12g006670.3 Solanum lycopersicum HOM05D005868 ORTHO05D006964 4.8e-40 167.9 110 70.0
Sopen12g002620 Solanum pennellii HOM05D005868 ORTHO05D006964 4.8e-40 167.9 110 70.0
Medtr0040s0110 Medicago truncatula HOM05D005868 ORTHO05D006964 8.3e-40 167.2 108 73.1
CAN.G377.18 Capsicum annuum HOM05D005868 ORTHO05D006964 1.1e-39 166.8 110 69.1
PGSC0003DMG402020668 Solanum tuberosum HOM05D005868 ORTHO05D006964 1.1e-39 166.8 110 69.1
FAN08G1464 Fragaria x ananassa HOM05D005868 ORTHO05D006964 3.1e-39 165.2 110 73.6
Os02g0202600 Oryza sativa ssp. japonica HOM05D005868 ORTHO05D006964 3.1e-39 165.2 119 67.2
RcHm_v2.0_Chr2g0088741 Rosa chinensis HOM05D005868 ORTHO05D006964 4.1e-39 164.9 110 72.7
RcHm_v2.0_Chr2g0088971 Rosa chinensis HOM05D005868 ORTHO05D006964 5.4e-39 164.5 110 71.8
RcHm_v2.0_Chr2g0089021 Rosa chinensis HOM05D005868 ORTHO05D006964 7.0e-39 164.1 109 72.5
AL4G17010 Arabidopsis lyrata HOM05D005868 ORTHO05D006964 9.1e-39 163.7 114 67.5
Carub.0004s0528 Capsella rubella HOM05D005868 ORTHO05D006964 9.1e-39 163.7 114 67.5
Zm00001eb205580 Zea mays HOM05D005868 ORTHO05D006964 9.1e-39 163.7 114 65.8
Migut.N02220 Erythranthe guttata HOM05D005868 ORTHO05D006964 1.2e-38 163.3 110 70.0
Lj2A993T36 Lonicera japonica HOM05D005868 ORTHO05D006964 1.2e-38 163.3 110 71.8
AT2G25570 Arabidopsis thaliana HOM05D005868 ORTHO05D006964 3.5e-38 161.8 114 66.7
CAN.G377.12 Capsicum annuum HOM05D005868 ORTHO05D006964 1.7e-37 159.5 110 66.4
MD15G1175100 Malus domestica HOM05D005868 ORTHO05D006964 1.7e-37 159.5 109 68.8
unitig_37.g12428 Utricularia gibba HOM05D005868 ORTHO05D006964 1.7e-37 159.5 114 68.4
Dinv41522 Davidia involucrata HOM05D005868 ORTHO05D006964 3.8e-37 158.3 110 69.1
Aa31LG6G5930 Aethionema arabicum HOM05D005868 ORTHO05D006964 5.0e-37 157.9 110 69.1
DCAR_009552 Daucus carota HOM05D005868 ORTHO05D006964 8.6e-37 157.1 110 67.3
DCAR_023114 Daucus carota HOM05D005868 ORTHO05D006964 8.6e-37 157.1 110 67.3
CSS0026098 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 1.1e-36 156.8 110 70.9
Sabra16G0124800 Salix brachista HOM05D005868 ORTHO05D006964 2.5e-36 155.6 117 66.7
ATR0322G055 Amborella trichopoda HOM05D005868 ORTHO05D006964 4.2e-36 154.8 104 73.1
Sp4g04970 Schrenkiella parvula HOM05D005868 ORTHO05D006964 5.5e-36 154.5 114 64.9
Aqoxy6G01600 Aquilegia oxysepala HOM05D005868 ORTHO05D006964 9.5e-36 153.7 104 73.1
Aqoxy7G02135 Aquilegia oxysepala HOM05D005868 ORTHO05D006964 9.5e-36 153.7 104 73.1
BcaB08g35195 Brassica carinata HOM05D005868 ORTHO05D006964 1.6e-35 152.9 114 64.0
BcaC07g40857 Brassica carinata HOM05D005868 ORTHO05D006964 1.6e-35 152.9 114 64.0
A09p55560 Brassica napus HOM05D005868 ORTHO05D006964 1.6e-35 152.9 114 64.0
BraA09t40958Z Brassica rapa HOM05D005868 ORTHO05D006964 1.6e-35 152.9 114 64.0
HPP92_000663 Vanilla planifolia HOM05D005868 ORTHO05D006964 3.6e-35 151.8 115 67.0
C08p38550 Brassica napus HOM05D005868 ORTHO05D006964 6.1e-35 151.0 114 63.2
BolC8t51427H Brassica oleracea HOM05D005868 ORTHO05D006964 6.1e-35 151.0 114 63.2
ClCG11G002940 Citrullus lanatus HOM05D005868 ORTHO05D006964 6.1e-35 151.0 156 53.8
HanXRQChr07g0197781 Helianthus annuus HOM05D005868 ORTHO05D006964 8.0e-35 150.6 104 67.3
HPP92_000683 Vanilla planifolia HOM05D005868 ORTHO05D006964 8.0e-35 150.6 115 67.0
PSO170G5445 Papaver somniferum HOM05D005868 ORTHO05D006964 1.0e-34 150.2 110 63.6
PSO455G0232 Papaver somniferum HOM05D005868 ORTHO05D006964 3.0e-34 148.7 110 62.7
GSVIVG01015515001 Vitis vinifera HOM05D000032 ORTHO05D001620 1.5e-33 146.4 114 61.4
Haze_25605 Corylus avellana HOM05D005868 ORTHO05D006964 2.6e-33 145.6 118 62.7
ECA238G3092 Erigeron canadensis HOM05D005868 ORTHO05D006964 4.4e-33 144.8 105 64.8
vmacro20542 Vaccinium macrocarpon HOM05D005868 ORTHO05D006964 4.4e-33 144.8 93 75.3
Manes.07G113800 Manihot esculenta HOM05D005868 ORTHO05D006964 5.7e-33 144.4 110 66.4
MBI04_g07645_MAGBIO Magnolia biondii HOM05D005868 ORTHO05D006964 7.5e-33 144.1 93 75.3
AUR62033475 Chenopodium quinoa HOM05D005868 ORTHO05D006964 3.7e-32 141.7 114 62.3
SHI18654 Sapria himalayana HOM05D005868 ORTHO05D006964 4.9e-32 141.4 115 57.4
Cc06_g08680 Coffea canephora HOM05D005868 ORTHO05D006964 6.3e-32 141.0 73 89.0
Lsat_1_v5_gn_2_95580 Lactuca sativa HOM05D005868 ORTHO05D006964 1.4e-31 139.8 104 68.3
Peaxi162Scf00984g00020 Petunia axillaris HOM05D005868 ORTHO05D006964 5.4e-31 137.9 110 60.0
Prupe.6G277700 Prunus persica HOM05D005868 ORTHO05D006964 2.0e-30 136.0 110 60.9
COL.COLO4_11936 Corchorus olitorius HOM05D005868 ORTHO05D006964 3.5e-30 135.2 114 57.9
Potri.001G219400 Populus trichocarpa HOM05D005868 ORTHO05D006964 3.8e-29 131.7 114 57.0
TPR.G21777 Trifolium pratense HOM05D005868 ORTHO05D006964 6.6e-29 131.0 118 56.8
Nitab4.5_0005139g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.5e-28 129.8 110 57.3
Sed0015563 Sechium edule HOM05D005868 ORTHO05D006964 7.3e-28 127.5 107 60.7
MD02G1034400 Malus domestica HOM05D005868 ORTHO05D006964 6.1e-27 124.4 109 56.9
HanXRQChr14g0452021 Helianthus annuus HOM05D005868 ORTHO05D006964 4.4e-25 118.2 90 62.2
TAR383G0149 Trochodendron aralioides HOM05D005868 ORTHO05D006964 1.4e-23 113.2 110 50.0
CARHR115770 Cardamine hirsuta HOM05D005868 ORTHO05D006964 1.9e-20 102.8 57 78.9
Thhalv10023629m.g Eutrema salsugineum HOM05D005868 ORTHO05D006964 3.3e-20 102.1 57 77.2
RcHm_v2.0_Chr2g0088921 Rosa chinensis HOM05D005868 ORTHO05D006964 1.4e-18 96.7 112 49.1
SEGI_01723 Sequoiadendron giganteum HOM05D005868 ORTHO05D006964 1.8e-18 96.3 93 45.2
arahy.Tifrunner.gnm1.ann1.T37JIE Arachis hypogaea HOM05D005868 ORTHO05D006964 9.8e-17 90.5 114 45.6
Mapoly0058s0058 Marchantia polymorpha HOM05D005868 ORTHO05D006964 1.9e-15 86.3 78 51.3
RcHm_v2.0_Chr2g0088761 Rosa chinensis HOM05D005868 ORTHO05D006964 2.4e-15 85.9 65 64.6
PGR102G1613 Punica granatum HOM05D005868 ORTHO05D006964 2.1e-14 82.8 110 42.7
CANSAT35G1449 Cannabis sativa HOM05D005868 ORTHO05D006964 3.5e-14 82.0 113 41.6
FAN23G1471 Fragaria x ananassa HOM05D005868 ORTHO05D006964 5.1e-13 78.2 37 89.2
Pp3c21_8470 Physcomitrium patens HOM05D005868 ORTHO05D006964 3.1e-10 68.9 71 43.7
CARHR115780 Cardamine hirsuta HOM05D005868 ORTHO05D006964 2.6e-09 65.9 58 56.9
EL10Ac8g18635 Beta vulgaris HOM05D005868 ORTHO05D006964 4.9e-08 61.6 101 36.6
Ca_25916_v3 Cicer arietinum L. HOM05D005868 ORTHO05D006964 4.9e-08 61.6 118 31.4
TWI32G0760 Tripterygium wilfordii HOM05D005868 ORTHO05D006964 2.4e-07 59.3 118 32.2
CBR_g783 Chara braunii HOM05D005868 ORTHO05D006964 4.1e-07 58.5 95 34.7
CSS0035520 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 2.1e-06 56.2 139 33.8
CSS0040694 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 2.1e-06 56.2 139 33.8
RcHm_v2.0_Chr4g0406881 Rosa chinensis HOM05D005868 ORTHO05D006964 4.6e-06 55.1 33 75.8
RcHm_v2.0_Chr3g0491871 Rosa chinensis HOM05D005868 ORTHO05D006964 6.0e-06 54.7 54 55.6


User provided reference genes

Program Settings