Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03899 Eucalyptus grandis HOM05D007811 ORTHO05D009888 1.7e-257 892.1 435 100.0
Dinv42318 Davidia involucrata HOM05D007811 ORTHO05D009888 3.2e-99 366.3 438 46.6
QL02p062715 Quercus lobata HOM05D007811 ORTHO05D009888 1.2e-93 347.8 439 45.6
Cfa003088 Carpinus fangiana HOM05D007811 ORTHO05D009888 3.2e-91 339.7 429 44.8
CiPaw.03G216500 Carya illinoinensis HOM05D007811 ORTHO05D009888 3.6e-90 336.3 437 43.5
Thecc.09G089600 Theobroma cacao HOM05D007811 ORTHO05D009888 4.7e-90 335.9 435 40.7
Haze_25911 Corylus avellana HOM05D007811 ORTHO05D009888 8.0e-90 335.1 430 45.1
Atru.chr7.1587 Acer truncatum HOM05D007811 ORTHO05D009888 7.5e-88 328.6 436 41.7
Ciclev10010815m.g Citrus clementina HOM05D007811 ORTHO05D009888 1.7e-87 327.4 441 43.3
Duzib168G1142 Durio zibethinus HOM05D007811 ORTHO05D009888 1.4e-86 324.3 438 42.0
Prupe.7G209900 Prunus persica HOM05D007811 ORTHO05D009888 2.4e-86 323.6 434 41.5
COL.COLO4_18202 Corchorus olitorius HOM05D007811 ORTHO05D009888 3.1e-86 323.2 433 40.6
TWI34G0321 Tripterygium wilfordii HOM05D007811 ORTHO05D009888 3.1e-86 323.2 438 43.8
GSVIVG01015202001 Vitis vinifera HOM05D007811 ORTHO05D009888 2.7e-85 320.1 437 41.4
Actinidia39718 Actinidia chinensis HOM05D007811 ORTHO05D009888 7.7e-85 318.5 439 43.3
Sabra06G0113100 Salix brachista HOM05D007811 ORTHO05D009888 7.7e-85 318.5 435 41.4
Sabra06G0114400 Salix brachista HOM05D007811 ORTHO05D009888 7.7e-85 318.5 435 41.4
PGR102G3061 Punica granatum HOM05D007811 ORTHO05D009888 6.5e-84 315.5 429 42.9
MD02G1079300 Malus domestica HOM05D007811 ORTHO05D009888 1.1e-83 314.7 423 42.8
TAR383G0833 Trochodendron aralioides HOM05D007811 ORTHO05D009888 1.6e-82 310.8 437 41.2
Gohir.A07G011000 Gossypium hirsutum HOM05D007811 ORTHO05D009888 6.1e-82 308.9 435 40.5
Hma1.2p1_0798F.1_g219820 Hydrangea macrophylla HOM05D007811 ORTHO05D009888 1.8e-81 307.4 432 44.2
Potri.006G144600 Populus trichocarpa HOM05D007811 ORTHO05D009888 4.0e-81 306.2 435 39.8
RcHm_v2.0_Chr2g0093321 Rosa chinensis HOM05D007811 ORTHO05D009888 2.2e-79 300.4 436 41.3
Gohir.D07G011150 Gossypium hirsutum HOM05D007811 ORTHO05D009888 3.7e-79 299.7 435 39.8
Gorai.001G011700 Gossypium raimondii HOM05D007811 ORTHO05D009888 6.3e-79 298.9 435 39.8
FAN26G0113 Fragaria x ananassa HOM05D007811 ORTHO05D009888 2.7e-77 293.5 439 41.2
FAN28G1627 Fragaria x ananassa HOM05D007811 ORTHO05D009888 7.7e-77 292.0 439 41.2
FAN19G2727 Fragaria x ananassa HOM05D007811 ORTHO05D009888 1.0e-76 291.6 439 41.0
Cpa.g.sc93.35 Carica papaya HOM05D007811 ORTHO05D009888 1.3e-76 291.2 444 40.1
Hma1.2p1_2664F.1_g326430 Hydrangea macrophylla HOM05D007811 ORTHO05D009888 5.0e-76 289.3 404 45.3
FvH4_1g07420 Fragaria vesca HOM05D007811 ORTHO05D009888 1.1e-75 288.1 439 40.8
FAN26G2623 Fragaria x ananassa HOM05D007811 ORTHO05D009888 7.2e-75 285.4 439 41.2
FAN23G0562 Fragaria x ananassa HOM05D007811 ORTHO05D009888 3.6e-74 283.1 439 41.0
DCAR_032238 Daucus carota HOM05D007811 ORTHO05D009888 4.7e-74 282.7 434 37.8
Nn6g35473 Nelumbo nucifera HOM05D007811 ORTHO05D009888 3.4e-72 276.6 451 38.1
CANSAT56G0268 Cannabis sativa HOM05D007811 ORTHO05D009888 1.7e-71 274.2 430 39.1
PGSC0003DMG400009724 Solanum tuberosum HOM05D007811 ORTHO05D009888 4.9e-71 272.7 423 37.8
Manes.03G033600 Manihot esculenta HOM05D007811 ORTHO05D009888 1.8e-70 270.8 428 38.8
MBI01_g21120_MAGBIO Magnolia biondii HOM05D007811 ORTHO05D009888 2.7e-69 266.9 463 37.1
Solyc07g038100.3 Solanum lycopersicum HOM05D007811 ORTHO05D009888 1.3e-68 264.6 423 37.1
Sopen07g018370 Solanum pennellii HOM05D007811 ORTHO05D009888 3.9e-68 263.1 423 36.9
MSTRG.19514 Avicennia marina HOM05D007811 ORTHO05D009888 9.5e-67 258.5 423 36.9
Nitab4.5_0005634g0040 Nicotiana tabacum HOM05D007811 ORTHO05D009888 9.5e-67 258.5 423 36.9
Nitab4.5_0004978g0030 Nicotiana tabacum HOM05D007811 ORTHO05D009888 1.4e-65 254.6 423 36.9
THA.LOC104817755 Tarenaya hassleriana HOM05D007811 ORTHO05D009888 4.0e-65 253.1 434 37.6
ECA234G0321 Erigeron canadensis HOM05D007811 ORTHO05D009888 2.0e-64 250.8 426 37.1
Migut.J00617 Erythranthe guttata HOM05D007811 ORTHO05D009888 2.6e-64 250.4 428 35.0
Peaxi162Scf01121g00111 Petunia axillaris HOM05D007811 ORTHO05D009888 2.6e-64 250.4 424 35.8
HanXRQChr12g0354871 Helianthus annuus HOM05D007811 ORTHO05D009888 4.6e-61 239.6 426 36.2
CANSAT56G0922 Cannabis sativa HOM05D007811 ORTHO05D009888 1.9e-59 234.2 382 38.7
Aqoxy7G04046 Aquilegia oxysepala HOM05D007811 ORTHO05D009888 2.5e-59 233.8 437 35.5
SalBow6G0727 Salvia bowleyana HOM05D007811 ORTHO05D009888 1.1e-57 228.4 427 33.3
Sc18g0001990 Simmondsia chinensis HOM05D007811 ORTHO05D009888 6.8e-57 225.7 437 33.9
Thhalv10006501m.g Eutrema salsugineum HOM05D007811 ORTHO05D009888 2.0e-56 224.2 427 35.1
PSO210G1027 Papaver somniferum HOM05D007811 ORTHO05D009888 7.5e-56 222.2 435 34.5
CARHR170630 Cardamine hirsuta HOM05D007811 ORTHO05D009888 3.7e-55 219.9 428 34.8
Carub.0005s2705 Capsella rubella HOM05D007811 ORTHO05D009888 4.6e-53 213.0 438 34.9
PSO210G6552 Papaver somniferum HOM05D007811 ORTHO05D009888 1.0e-52 211.8 428 34.1
SGA_v2.0_scaffold10G05228 Striga asiatica HOM05D007811 ORTHO05D009888 1.0e-52 211.8 433 32.3
Lsat_1_v5_gn_5_142361 Lactuca sativa HOM05D007811 ORTHO05D009888 6.6e-52 209.1 421 33.0
AT3G60310 Arabidopsis thaliana HOM05D007811 ORTHO05D009888 1.1e-51 208.4 432 34.5
BraA04t15894Z Brassica rapa HOM05D007811 ORTHO05D009888 4.3e-51 206.5 420 33.6
BcaB02g08177 Brassica carinata HOM05D007811 ORTHO05D009888 7.3e-51 205.7 422 33.4
A04p01700 Brassica napus HOM05D007811 ORTHO05D009888 2.1e-50 204.1 420 33.6
BolC4t24783H Brassica oleracea HOM05D007811 ORTHO05D009888 4.7e-50 203.0 420 33.6
BcaC02g10146 Brassica carinata HOM05D007811 ORTHO05D009888 8.1e-50 202.2 420 33.6
AL5G42530 Arabidopsis lyrata HOM05D007811 ORTHO05D009888 3.1e-49 200.3 437 34.6
ATR0749G017 Amborella trichopoda HOM05D007811 ORTHO05D009888 4.0e-49 199.9 454 31.1
C04p32330 Brassica napus HOM05D007811 ORTHO05D009888 6.8e-49 199.1 420 33.3
Oeu042653.6 Olea europaea HOM05D007811 ORTHO05D009888 4.1e-46 189.9 347 35.2
HPP92_003971 Vanilla planifolia HOM05D007811 ORTHO05D009888 4.0e-41 173.3 436 28.9
Zm00001eb376990 Zea mays HOM05D007811 ORTHO05D009888 8.9e-41 172.2 436 30.7
DCAR_028591 Daucus carota HOM05D007811 ORTHO05D009888 1.6e-34 151.4 298 33.2
Cfa003090 Carpinus fangiana HOM05D007811 ORTHO05D009888 4.3e-27 126.7 173 44.5
CAN.G720.2 Capsicum annuum HOM05D007811 ORTHO05D009888 9.6e-27 125.6 208 33.2
SEGI_10589 Sequoiadendron giganteum HOM05D007811 ORTHO05D009888 4.5e-24 116.7 570 23.7
Haze_25909 Corylus avellana HOM05D007811 ORTHO05D009888 3.5e-21 107.1 138 44.2
Cc00_g27490 Coffea canephora HOM05D007811 ORTHO05D009888 5.1e-20 103.2 117 46.2
CAN.G720.1 Capsicum annuum HOM05D007811 ORTHO05D009888 3.1e-17 94.0 110 42.7
CDE04G1243 Ceratophyllum demersum HOM05D000793 ORTHO05D000783 5.5e-14 83.2 134 40.3
SEGI_03446 Sequoiadendron giganteum HOM05D007811 ORTHO05D009888 4.6e-13 80.1 247 27.5
Zm00001eb270640 Zea mays HOM05D007811 ORTHO05D009888 4.2e-06 57.0 84 35.7


User provided reference genes

Program Settings