Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 0.0e+00 1260.7 652 100.0
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.5e-312 1073.9 575 97.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 3.5e-89 333.6 638 37.3
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.7e-72 278.1 618 34.0
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 3.0e-72 277.3 583 35.0
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 3.0e-72 277.3 647 34.5
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 5.6e-71 273.1 620 35.0
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 7.3e-71 272.7 622 35.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 6.2e-70 269.6 706 31.9
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.2e-62 245.4 586 32.3
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.6e-62 245.0 584 33.6
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.6e-62 245.0 532 34.8
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.6e-62 243.8 633 32.5
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.1e-61 242.3 629 32.9
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.0e-60 238.0 619 32.0
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 9.9e-60 235.7 621 31.9
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 4.9e-59 233.4 622 33.1
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.4e-59 233.0 622 32.0
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.4e-58 231.9 639 31.0
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 2.4e-58 231.1 643 31.7
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.1e-58 229.6 621 32.2
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.1e-57 228.0 644 30.9
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.7e-57 227.6 581 32.2
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 6.0e-57 226.5 628 33.3
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.0e-56 225.7 605 30.9
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 3.0e-56 224.2 701 29.7
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.3e-55 220.3 610 31.1
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 5.6e-55 219.9 613 32.6
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 5.6e-55 219.9 583 32.6
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.6e-55 219.9 614 31.3
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.2e-54 218.8 653 30.0
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.2e-54 218.8 700 29.4
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 2.1e-54 218.0 621 30.8
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 6.2e-54 216.5 582 33.5
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 6.2e-54 216.5 701 29.7
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 2.4e-53 214.5 625 32.0
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.2e-53 213.4 612 30.7
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 9.9e-52 209.1 638 31.7
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.7e-51 208.4 622 30.1
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.7e-49 201.1 601 31.8
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.6e-48 196.4 653 28.2
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 8.7e-48 196.1 572 29.7
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.9e-47 194.9 653 28.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 3.6e-46 190.7 643 30.2
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.1e-45 189.1 575 28.5
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 1.8e-45 188.3 622 30.2
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 3.1e-45 187.6 432 35.9
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 7.6e-44 183.0 362 36.7
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.7e-43 181.8 448 32.8
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 2.2e-43 181.4 605 28.6
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 3.8e-43 180.6 608 31.7
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 6.4e-43 179.9 590 28.6
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 6.0e-41 173.3 502 30.5
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.1e-39 169.1 555 27.4
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.6e-38 165.2 771 25.3
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.6e-38 165.2 384 33.9
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 3.7e-38 164.1 371 34.2
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 4.0e-37 160.6 395 31.1
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 5.3e-37 160.2 638 29.3
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 9.0e-37 159.5 359 35.1
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.5e-36 158.7 576 27.8
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 9.9e-36 156.0 329 34.0
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.7e-35 155.2 813 25.6
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.7e-35 155.2 144 56.2
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.7e-35 155.2 156 54.5
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.4e-34 152.1 754 24.5
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.4e-34 151.4 207 44.0
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.6e-33 148.7 643 25.5
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.6e-33 148.7 127 56.7
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 2.1e-33 148.3 583 28.5
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 7.9e-33 146.4 113 62.8
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.0e-32 146.0 197 41.1
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.3e-32 145.6 449 29.6
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.3e-32 145.6 520 29.4
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.3e-32 145.6 176 47.7
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 2.3e-32 144.8 573 27.6
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 5.1e-32 143.7 583 28.5
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.1e-31 142.5 591 28.1
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 2.5e-31 141.4 278 35.3
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 5.6e-31 140.2 574 27.4
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 2.8e-30 137.9 599 26.9
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 2.8e-30 137.9 131 51.1
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 8.2e-30 136.3 344 31.7
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.1e-29 136.0 777 25.6
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 3.1e-29 134.4 329 33.1
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 3.1e-29 134.4 137 47.4
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.2e-28 132.5 483 27.5
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.0e-28 131.7 248 35.1
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 2.0e-28 131.7 489 27.2
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 2.6e-28 131.3 478 25.7
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.7e-27 128.6 604 26.3
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.1e-23 115.9 445 28.8
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 9.7e-23 112.8 309 30.7
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 6.3e-22 110.2 178 39.3
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.1e-21 109.4 304 30.3
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 9.0e-21 106.3 307 28.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.0e-20 105.1 335 29.3
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 3.8e-19 100.9 135 36.3
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 7.2e-18 96.7 164 38.4
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.7e-17 94.7 146 38.4
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 3.6e-17 94.4 344 28.8
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 6.1e-17 93.6 145 34.5
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 5.1e-16 90.5 286 29.4
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.1e-13 82.8 81 51.9
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.8e-13 82.0 136 33.1
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.8e-13 82.0 136 33.1
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 2.0e-12 78.6 91 38.5
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.5e-12 77.4 118 39.8
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 7.7e-12 76.6 127 29.1
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 2.2e-11 75.1 267 28.1
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 4.4e-07 60.8 101 34.7
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 9.7e-07 59.7 477 23.3
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.3e-06 59.3 78 35.9
Sc18g0002050 Simmondsia chinensis HOM05D006771 ORTHO05D008296 4.8e-06 57.4 134 32.8


User provided reference genes

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