Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 1.8e-207 725.7 369 100.0
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 2.5e-145 519.2 377 70.3
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.4e-143 513.5 376 69.7
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 1.5e-142 510.0 382 68.6
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 8.4e-141 504.2 316 78.2
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 8.4e-141 504.2 359 71.6
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 9.3e-140 500.7 385 68.3
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.2e-139 500.4 377 69.5
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.2e-139 500.4 377 69.5
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 2.1e-139 499.6 370 70.3
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.7e-139 499.2 341 74.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 2.7e-139 499.2 385 68.1
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.7e-139 499.2 377 69.0
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 3.5e-139 498.8 360 70.3
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 1.0e-138 497.3 375 68.8
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.0e-138 497.3 322 75.2
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 1.3e-138 496.9 379 67.8
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 3.0e-138 495.7 384 67.4
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 3.9e-138 495.4 377 69.2
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.9e-138 495.4 377 68.4
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 3.9e-138 495.4 379 67.8
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 5.1e-138 495.0 373 68.4
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 8.7e-138 494.2 371 67.4
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 8.7e-138 494.2 382 67.3
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.1e-137 493.8 361 69.0
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 1.9e-137 493.0 382 66.5
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 2.5e-137 492.7 344 71.5
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 2.5e-137 492.7 327 74.9
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 4.3e-137 491.9 375 68.0
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 5.6e-137 491.5 383 67.1
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 5.6e-137 491.5 344 71.2
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 5.6e-137 491.5 383 67.9
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 7.4e-137 491.1 387 65.9
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 9.6e-137 490.7 369 67.8
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 9.6e-137 490.7 370 68.6
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 1.6e-136 490.0 366 66.9
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.6e-136 490.0 352 69.0
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.6e-136 490.0 352 69.0
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.6e-136 490.0 383 67.1
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 2.1e-136 489.6 367 68.1
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.1e-136 489.6 365 67.9
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 2.8e-136 489.2 375 67.7
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 2.8e-136 489.2 359 68.5
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 3.7e-136 488.8 366 68.9
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 6.2e-136 488.0 375 68.0
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 6.2e-136 488.0 375 67.5
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 6.2e-136 488.0 384 66.7
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 8.2e-136 487.6 362 67.1
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 1.1e-135 487.3 381 65.6
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 1.1e-135 487.3 294 80.6
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 1.1e-135 487.3 377 67.6
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 1.1e-135 487.3 380 68.4
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 1.1e-135 487.3 330 73.3
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 1.4e-135 486.9 366 67.8
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.4e-135 486.9 366 67.8
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 2.4e-135 486.1 365 68.5
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 2.4e-135 486.1 380 66.1
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 4.0e-135 485.3 384 66.9
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 4.0e-135 485.3 350 69.1
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 4.0e-135 485.3 384 65.9
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.3e-135 485.0 377 67.1
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 6.9e-135 484.6 381 67.2
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 1.2e-134 483.8 294 78.2
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 2.0e-134 483.0 326 72.4
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.6e-134 482.6 372 67.7
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 3.4e-134 482.3 376 67.6
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 4.5e-134 481.9 380 66.1
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.0e-133 480.7 294 77.9
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.2e-133 479.6 383 65.0
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 2.9e-133 479.2 378 65.3
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 2.9e-133 479.2 304 77.0
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 4.9e-133 478.4 380 66.1
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 8.4e-133 477.6 373 67.0
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 4.2e-132 475.3 373 64.9
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 7.1e-132 474.6 295 78.0
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 7.1e-132 474.6 379 63.9
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.6e-131 473.4 377 64.7
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.6e-131 473.4 383 66.3
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 2.7e-131 472.6 363 66.4
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 3.5e-131 472.2 370 66.2
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 6.0e-131 471.5 323 73.1
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 7.9e-131 471.1 428 60.7
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 2.3e-130 469.5 373 65.1
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 3.0e-130 469.2 346 67.9
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 5.7e-129 464.9 366 65.8
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.7e-129 464.2 432 60.0
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 1.3e-128 463.8 380 63.2
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 2.4e-127 459.5 379 64.1
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 3.1e-127 459.1 359 65.5
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 2.9e-125 452.6 303 71.3
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 5.5e-124 448.4 365 63.3
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 7.2e-124 448.0 377 60.7
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 6.1e-123 444.9 294 73.8
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.3e-122 443.0 292 74.3
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 3.9e-122 442.2 439 57.9
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 2.8e-120 436.0 380 60.3
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 4.1e-119 432.2 294 70.1
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 2.6e-118 429.5 294 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 1.1e-116 424.1 294 70.1
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.1e-116 424.1 347 62.0
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.0e-114 417.5 367 59.1
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.8e-114 416.8 367 58.6
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 1.5e-113 413.7 229 84.7
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 4.8e-112 408.7 369 58.0
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.4e-111 407.1 338 63.9
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 3.7e-96 355.9 428 50.5
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 6.8e-90 335.1 182 84.1
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 3.4e-89 332.8 341 52.2
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 1.1e-84 317.8 312 58.0
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 2.2e-80 303.5 215 66.5
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 2.7e-78 296.6 275 60.7
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 5.6e-76 288.9 271 60.9
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.5e-73 280.8 260 58.8
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 4.4e-73 279.3 279 55.9
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 1.5e-68 264.2 224 62.1
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 2.3e-66 256.9 306 49.3
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.0e-45 186.8 245 47.8
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 1.0e-21 108.6 59 74.6
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.4e-15 88.2 63 66.7
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 1.9e-15 87.8 155 42.6
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 2.5e-15 87.4 155 43.2
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 3.8e-08 63.5 38 68.4


User provided reference genes

Program Settings