Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 3.1e-167 591.7 288 100.0
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 3.9e-101 372.1 274 62.0
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 4.3e-100 368.6 284 60.9
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 8.1e-99 364.4 269 61.7
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 2.0e-97 359.8 274 59.5
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 6.4e-96 354.8 282 62.1
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 1.1e-95 354.0 271 62.4
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 1.9e-95 353.2 272 63.6
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 7.1e-95 351.3 280 58.9
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 7.9e-94 347.8 280 58.6
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 1.0e-93 347.4 282 61.3
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 1.5e-92 343.6 295 56.3
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 1.9e-92 343.2 262 61.8
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 2.5e-92 342.8 254 64.6
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 5.6e-92 341.7 272 61.0
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.6e-91 340.1 270 60.7
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 1.6e-91 340.1 282 56.7
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.1e-91 339.7 266 62.8
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 6.2e-91 338.2 279 57.0
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 6.9e-90 334.7 288 55.9
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 6.9e-90 334.7 277 58.1
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 9.0e-90 334.3 268 62.7
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 9.0e-90 334.3 268 62.7
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.2e-89 334.0 281 59.4
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 1.5e-89 333.6 286 55.2
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 2.0e-89 333.2 266 62.0
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 2.0e-89 333.2 266 63.2
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 2.6e-89 332.8 269 61.3
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 4.5e-89 332.0 267 61.4
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 4.5e-89 332.0 267 61.0
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 4.5e-89 332.0 281 59.1
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 4.5e-89 332.0 267 61.4
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 4.5e-89 332.0 292 57.2
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 4.5e-89 332.0 268 61.6
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 7.6e-89 331.3 267 61.8
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 7.6e-89 331.3 268 60.4
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 7.6e-89 331.3 285 54.4
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 1.0e-88 330.9 266 62.0
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.0e-88 330.9 268 62.3
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 1.7e-88 330.1 276 58.3
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 2.2e-88 329.7 276 59.4
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 6.5e-88 328.2 264 60.2
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 1.4e-87 327.0 280 57.1
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 7.1e-87 324.7 269 59.1
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 9.3e-87 324.3 272 59.2
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 2.1e-86 323.2 302 53.6
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 7.9e-86 321.2 276 56.2
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 1.3e-85 320.5 269 59.1
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 5.1e-85 318.5 262 56.9
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 6.7e-85 318.2 288 53.8
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 8.7e-85 317.8 264 57.6
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 1.5e-84 317.0 271 55.0
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 2.5e-84 316.2 271 57.9
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.5e-84 316.2 275 57.1
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 3.3e-84 315.8 281 54.8
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 4.3e-84 315.5 267 55.4
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 4.3e-84 315.5 263 56.7
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 4.3e-84 315.5 262 56.5
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 4.3e-84 315.5 281 54.8
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 5.7e-84 315.1 279 55.2
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.3e-83 313.9 290 53.1
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 1.6e-83 313.5 263 57.0
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 2.1e-83 313.2 289 55.4
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 2.1e-83 313.2 277 56.7
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 4.8e-83 312.0 279 54.8
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 6.3e-83 311.6 282 53.9
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 1.1e-82 310.8 245 60.8
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.8e-82 310.1 270 56.7
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 4.1e-82 308.9 275 55.3
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 5.3e-82 308.5 278 54.7
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 5.3e-82 308.5 277 56.3
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 6.9e-82 308.1 268 56.3
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 6.9e-82 308.1 286 54.5
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 6.9e-82 308.1 268 57.8
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 9.0e-82 307.8 285 53.3
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 1.2e-81 307.4 275 55.6
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 7.6e-81 304.7 282 54.3
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 4.2e-79 298.9 284 52.5
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 7.2e-79 298.1 252 57.9
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 2.1e-78 296.6 263 54.4
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 3.6e-78 295.8 283 51.9
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 1.8e-77 293.5 289 52.6
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 1.8e-77 293.5 254 57.5
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 5.1e-77 292.0 282 51.4
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 5.1e-77 292.0 271 52.8
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.1e-76 290.8 284 50.7
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.3e-75 287.3 284 50.0
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 8.2e-75 284.6 246 58.1
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.2e-73 280.8 268 54.1
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 1.2e-73 280.8 289 51.2
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 2.0e-73 280.0 208 63.5
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.5e-73 278.9 272 51.8
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 5.9e-73 278.5 282 51.1
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.0e-72 277.7 289 51.2
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 8.5e-72 274.6 252 54.4
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 1.1e-71 274.2 243 55.1
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 2.7e-70 269.6 216 57.9
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 1.1e-68 264.2 251 52.6
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 1.5e-68 263.8 290 48.3
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 5.3e-66 255.4 305 46.2
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 5.9e-65 251.9 279 45.5
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.9e-64 249.6 348 40.5
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.8e-61 240.4 277 45.1
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 3.3e-60 236.1 277 47.7
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 9.7e-60 234.6 284 40.8
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 2.2e-59 233.4 301 40.9
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 2.2e-59 233.4 276 40.9
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 8.2e-59 231.5 192 57.8
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 3.1e-58 229.6 255 45.9
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 9.7e-52 208.0 281 41.6
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.8e-51 206.5 223 47.1
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.8e-51 206.5 223 47.1
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 2.4e-50 203.4 297 37.4
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.1e-50 201.4 220 46.8
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.6e-49 200.7 220 46.8
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.7e-48 197.2 226 46.5
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 1.2e-46 191.0 210 50.5
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.8e-45 187.2 197 49.7
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 3.4e-44 183.0 250 38.4
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 4.8e-43 179.1 195 45.6
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 4.5e-41 172.6 123 64.2
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 3.8e-40 169.5 172 49.4
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 7.2e-39 165.2 416 28.1
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 5.2e-37 159.1 138 56.5
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.1e-34 151.4 295 33.9
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 1.6e-33 147.5 165 48.5
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 2.7e-33 146.7 159 45.3
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 5.6e-31 139.0 390 29.5
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 1.6e-30 137.5 159 47.8
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 3.0e-29 133.3 345 30.4
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 9.8e-28 128.3 140 47.9
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 1.3e-24 117.9 155 41.3
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 5.6e-23 112.5 76 63.2
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.6e-22 110.9 155 38.7
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 4.4e-20 102.8 65 66.2
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 4.9e-19 99.4 141 43.3
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 7.0e-18 95.5 53 73.6
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.1e-15 88.2 51 70.6
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.2e-14 84.7 165 35.8
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 2.1e-14 84.0 56 66.1
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 2.6e-12 77.0 194 30.4
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.3e-11 74.7 104 38.5
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 1.9e-07 60.8 40 60.0
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 5.6e-07 59.3 38 60.5
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.7e-06 56.2 27 81.5


User provided reference genes

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