Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 5.6e-308 1060.1 520 100.0
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 1.4e-271 939.1 520 86.0
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 7.2e-271 936.8 520 85.2
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 7.9e-270 933.3 520 85.6
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 3.3e-268 927.9 520 83.5
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 4.1e-266 921.0 520 83.7
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 4.1e-266 921.0 520 84.2
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 5.9e-265 917.1 520 83.7
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 6.5e-264 913.7 518 84.2
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 7.2e-263 910.2 518 84.4
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 7.9e-262 906.7 520 83.3
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 7.9e-262 906.7 519 84.0
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.0e-261 906.4 519 83.0
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 1.0e-261 906.4 514 84.2
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.8e-261 905.6 519 82.9
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 3.9e-261 904.4 520 82.3
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 1.5e-260 902.5 521 82.9
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 2.6e-260 901.7 520 82.9
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 3.3e-260 901.4 544 79.8
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.2e-259 898.7 522 83.0
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 8.2e-259 896.7 521 82.5
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.2e-259 896.7 522 83.1
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.4e-258 895.2 522 82.8
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 2.4e-258 895.2 520 81.7
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.1e-258 894.4 520 82.7
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 4.1e-258 894.4 516 83.1
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 7.0e-258 893.6 544 79.0
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.0e-257 892.1 522 82.4
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 2.6e-257 891.7 516 82.9
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 5.9e-257 890.6 520 81.5
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 5.9e-257 890.6 520 80.8
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 5.9e-257 890.6 516 82.8
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.7e-256 889.0 519 81.5
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 2.2e-256 888.6 520 81.0
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 3.8e-256 887.9 513 81.7
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 5.0e-256 887.5 516 81.2
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.9e-255 885.6 520 83.1
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 2.5e-255 885.2 521 81.0
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.5e-255 885.2 518 80.5
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 3.2e-255 884.8 520 81.5
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 4.2e-255 884.4 520 80.4
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 4.2e-255 884.4 521 80.6
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 5.5e-255 884.0 521 80.0
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 9.4e-255 883.2 520 82.3
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 1.2e-254 882.9 521 79.5
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 1.6e-254 882.5 521 80.6
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 1.6e-254 882.5 521 79.7
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 2.7e-254 881.7 516 81.4
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.7e-254 880.9 554 78.2
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 4.7e-254 880.9 516 81.2
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 4.7e-254 880.9 520 82.3
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 4.7e-254 880.9 520 81.0
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 4.7e-254 880.9 515 81.6
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 8.0e-254 880.2 521 80.4
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 8.0e-254 880.2 520 80.8
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 6.7e-253 877.1 516 81.4
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 8.8e-253 876.7 517 80.9
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.5e-252 875.9 518 82.0
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 2.6e-252 875.2 520 80.2
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 2.2e-251 872.1 516 80.0
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 2.8e-251 871.7 521 80.6
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 3.7e-251 871.3 520 80.6
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 4.8e-251 870.9 520 80.6
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 2.4e-250 868.6 521 79.1
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 2.4e-250 868.6 521 80.0
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 3.1e-250 868.2 520 80.6
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 3.1e-250 868.2 520 78.8
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 7.0e-250 867.1 520 78.5
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 1.2e-249 866.3 521 78.1
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 1.6e-249 865.9 520 80.2
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 2.0e-249 865.5 520 79.2
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 2.6e-249 865.1 521 77.9
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 2.6e-249 865.1 521 77.9
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 4.5e-249 864.4 521 78.1
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 7.7e-249 863.6 520 78.8
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 7.7e-249 863.6 520 78.8
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.7e-248 862.4 526 77.6
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 2.2e-248 862.1 521 77.5
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 2.2e-248 862.1 521 77.5
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 5.0e-248 860.9 516 78.7
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 5.0e-248 860.9 516 78.7
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 1.1e-247 859.8 521 78.9
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 2.5e-247 858.6 517 78.7
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 3.2e-247 858.2 517 78.3
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 1.0e-245 853.2 517 77.6
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 1.0e-245 853.2 517 77.6
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.4e-245 852.8 517 77.6
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.4e-245 852.8 530 77.2
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 1.8e-245 852.4 517 77.6
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 4.0e-245 851.3 520 78.1
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 2.2e-243 845.5 466 85.8
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 2.8e-243 845.1 520 77.9
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 3.7e-243 844.7 515 77.5
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.1e-242 843.2 514 79.8
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 5.3e-242 840.9 520 78.1
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 2.7e-241 838.6 516 79.3
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 2.9e-240 835.1 492 80.5
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 5.0e-240 834.3 530 75.7
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 5.5e-239 830.9 520 76.3
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 2.7e-238 828.6 466 85.2
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 2.7e-238 828.6 518 77.8
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 3.6e-238 828.2 514 75.7
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 8.0e-238 827.0 522 75.9
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.0e-237 826.6 464 84.5
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 4.0e-237 824.7 466 83.0
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 5.2e-237 824.3 520 77.5
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 3.4e-236 821.6 522 75.7
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 4.4e-236 821.2 524 75.4
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 5.7e-236 820.8 476 80.5
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 7.5e-236 820.5 519 75.1
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 3.7e-235 818.1 519 75.3
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.8e-235 817.8 520 76.2
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 4.5e-233 811.2 515 75.3
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 6.6e-232 807.4 519 75.0
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.1e-231 806.6 470 80.9
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 4.2e-231 804.7 469 81.4
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 3.6e-230 801.6 520 75.0
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 3.6e-230 801.6 521 75.8
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 8.0e-230 800.4 521 74.3
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.0e-229 800.0 519 74.6
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 2.3e-229 798.9 516 74.0
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 5.2e-229 797.7 573 69.6
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 6.8e-229 797.3 516 73.6
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 8.9e-229 797.0 520 74.4
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.2e-228 796.6 520 74.2
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 2.0e-228 795.8 553 70.9
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 2.0e-228 795.8 516 73.6
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 7.5e-228 793.9 490 79.0
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 1.7e-227 792.7 561 71.5
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 5.4e-226 787.7 550 71.6
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 6.6e-224 780.8 519 73.2
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 1.0e-221 773.5 520 72.7
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 1.3e-219 766.5 495 74.7
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 2.9e-219 765.4 520 73.1
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 6.4e-219 764.2 495 74.5
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.2e-217 760.0 518 70.3
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.2e-209 733.4 520 68.8
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.8e-205 719.5 540 66.5
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 1.5e-204 716.5 520 67.9
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 1.5e-204 716.5 519 69.6
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 8.1e-198 694.1 503 70.2
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 3.8e-195 685.3 373 87.4
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 2.8e-190 669.1 380 83.9
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 5.8e-188 661.4 479 67.6
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 1.4e-186 656.8 561 61.5
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 6.0e-185 651.4 382 80.6
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 1.1e-178 630.6 480 66.9
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 1.1e-175 620.5 511 60.1
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 2.4e-173 612.8 446 64.8
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.6e-161 573.5 472 60.2
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 1.4e-152 543.9 487 55.2
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 3.8e-147 525.8 352 72.7
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 6.3e-134 481.9 289 81.0
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 2.2e-131 473.4 293 76.5
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 2.9e-131 473.0 294 77.2
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 7.2e-130 468.4 265 80.0
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.0e-128 464.5 291 76.6
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 1.6e-124 450.7 288 76.4
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 3.2e-109 399.8 250 75.2
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 6.2e-105 385.6 244 75.8
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 7.1e-85 318.9 204 76.0
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 1.8e-56 224.6 132 79.5
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 1.5e-55 221.5 440 33.6
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 7.1e-53 212.6 484 31.8
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-44 185.3 203 52.2
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.0e-39 167.9 141 56.7
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 1.8e-35 154.8 109 67.0
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 4.4e-26 123.6 86 68.6
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.2e-22 111.3 142 51.4
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 5.0e-22 110.2 59 84.7
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 1.6e-20 105.1 60 78.3
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 2.4e-16 91.3 144 36.8
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.1e-16 90.5 165 42.4
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.2e-07 62.4 37 78.4
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 3.8e-06 57.4 55 54.5
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 8.5e-06 56.2 47 55.3


User provided reference genes

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