Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03726 Eucalyptus grandis HOM05D008202 ORTHO05D010302 1.2e-46 189.5 95 100.0
Thecc.09G099700 Theobroma cacao HOM05D008202 ORTHO05D010302 7.0e-15 84.0 84 52.4
EL10Ac8g18376 Beta vulgaris HOM05D008202 ORTHO05D010302 3.2e-12 75.1 76 52.6
CiPaw.04G157000 Carya illinoinensis HOM05D008202 ORTHO05D010302 3.2e-12 75.1 86 50.0
Manes.03G026600 Manihot esculenta HOM05D008202 ORTHO05D010302 3.2e-12 75.1 75 52.0
PGR102G0794 Punica granatum HOM05D008202 ORTHO05D010302 4.2e-12 74.7 86 51.2
CiPaw.04G155900 Carya illinoinensis HOM05D008202 ORTHO05D010302 5.5e-12 74.3 86 50.0
Sc18g0001520 Simmondsia chinensis HOM05D008202 ORTHO05D010302 7.2e-12 73.9 77 51.9
Haze_25829 Corylus avellana HOM05D008202 ORTHO05D010302 9.5e-12 73.6 78 52.6
Dinv42250 Davidia involucrata HOM05D008202 ORTHO05D010302 1.6e-11 72.8 78 48.7
Actinidia39781 Actinidia chinensis HOM05D008202 ORTHO05D010302 2.8e-11 72.0 82 45.1
AUR62010887 Chenopodium quinoa HOM05D008202 ORTHO05D010302 1.8e-10 69.3 76 48.7
Gohir.A06G067500 Gossypium hirsutum HOM05D008202 ORTHO05D010302 1.8e-10 69.3 81 49.4
AUR62021399 Chenopodium quinoa HOM05D008202 ORTHO05D010302 2.3e-10 68.9 76 47.4
Gorai.010G077500 Gossypium raimondii HOM05D008202 ORTHO05D010302 5.2e-10 67.8 81 49.4
TWI63G1052 Tripterygium wilfordii HOM05D008202 ORTHO05D010302 6.8e-10 67.4 89 44.9
Cc06_g10540 Coffea canephora HOM05D008202 ORTHO05D010302 1.5e-09 66.2 78 47.4
Hma1.2p1_0386F.1_g141760 Hydrangea macrophylla HOM05D008202 ORTHO05D010302 2.0e-09 65.9 78 46.2
Ciclev10010342m.g Citrus clementina HOM05D008202 ORTHO05D010302 2.6e-09 65.5 71 46.5
Ah.14g083220 Amaranthus hybridus HOM05D008202 ORTHO05D010302 3.4e-09 65.1 76 47.4
Actinidia17520 Actinidia chinensis HOM05D008202 ORTHO05D010302 4.4e-09 64.7 78 42.3
Dinv36682 Davidia involucrata HOM05D008202 ORTHO05D010302 4.4e-09 64.7 50 58.0
MD15G1197100 Malus domestica HOM05D008202 ORTHO05D010302 1.3e-08 63.2 81 44.4
FAN23G0175 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.7e-08 62.8 90 40.0
MBI01_g10122_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 1.7e-08 62.8 45 55.6
Prupe.7G218700 Prunus persica HOM05D008202 ORTHO05D010302 1.7e-08 62.8 89 40.4
Manes.04G125801 Manihot esculenta HOM05D008202 ORTHO05D010302 2.2e-08 62.4 79 46.8
Manes.13G078801 Manihot esculenta HOM05D008202 ORTHO05D010302 2.2e-08 62.4 79 46.8
Rhsim05G0039400 Rhododendron simsii HOM05D008202 ORTHO05D010302 3.7e-08 61.6 83 38.6
GSVIVG01015295001 Vitis vinifera HOM05D008202 ORTHO05D010302 6.3e-08 60.8 80 45.0
CSS0001567 Camellia sinensis var. sinensis HOM05D008202 ORTHO05D010302 8.3e-08 60.5 80 41.2
Ciclev10027258m.g Citrus clementina HOM05D008202 ORTHO05D010302 1.1e-07 60.1 57 47.4
Peaxi162Scf00720g00418 Petunia axillaris HOM05D008202 ORTHO05D010302 1.4e-07 59.7 71 46.5
FvH4_1g06280 Fragaria vesca HOM05D008202 ORTHO05D010302 1.8e-07 59.3 90 38.9
FAN19G1093 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.8e-07 59.3 90 38.9
Gohir.D06G066100 Gossypium hirsutum HOM05D008202 ORTHO05D010302 2.4e-07 58.9 81 46.9
HanXRQChr12g0358111 Helianthus annuus HOM05D008202 ORTHO05D010302 2.4e-07 58.9 80 43.8
Medtr6g088800 Medicago truncatula HOM05D008202 ORTHO05D010302 2.4e-07 58.9 76 44.7
Oeu018577.1 Olea europaea HOM05D008202 ORTHO05D010302 2.4e-07 58.9 77 40.3
vmacro10849 Vaccinium macrocarpon HOM05D008202 ORTHO05D010302 2.4e-07 58.9 57 47.4
MD02G1066600 Malus domestica HOM05D008202 ORTHO05D010302 3.1e-07 58.5 89 39.3
Ciclev10027039m.g Citrus clementina HOM05D008202 ORTHO05D010302 4.1e-07 58.2 91 40.7
Lsat_1_v5_gn_8_98261 Lactuca sativa HOM05D008202 ORTHO05D010302 4.1e-07 58.2 78 44.9
Atru.chr7.1471 Acer truncatum HOM05D008202 ORTHO05D010302 5.4e-07 57.8 84 41.7
COL.COLO4_34733 Corchorus olitorius HOM05D008202 ORTHO05D010302 9.2e-07 57.0 35 65.7
MSTRG.19550 Avicennia marina HOM05D008202 ORTHO05D010302 1.2e-06 56.6 84 41.7
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 1.6e-06 56.2 82 40.2
RcHm_v2.0_Chr2g0091981 Rosa chinensis HOM05D008202 ORTHO05D010302 1.6e-06 56.2 51 51.0
FAN26G0167 Fragaria x ananassa HOM05D008202 ORTHO05D010302 2.0e-06 55.8 45 51.1
FAN26G3206 Fragaria x ananassa HOM05D008202 ORTHO05D010302 2.0e-06 55.8 45 51.1
SGA_v2.0_scaffold512G52633 Striga asiatica HOM05D008202 ORTHO05D010302 2.0e-06 55.8 81 37.0
DCAR_028656 Daucus carota HOM05D008202 ORTHO05D010302 2.7e-06 55.5 76 39.5
Lalb_Chr14g0371911 Lupinus albus HOM05D008202 ORTHO05D010302 2.7e-06 55.5 46 60.9
ClCG11G002070 Citrullus lanatus HOM05D008202 ORTHO05D010302 5.9e-06 54.3 61 44.3
Ah.14g082540 Amaranthus hybridus HOM05D008202 ORTHO05D010302 7.8e-06 53.9 32 65.6
ATR0705G156 Amborella trichopoda HOM05D008202 ORTHO05D010302 7.8e-06 53.9 75 46.7
Migut.K00545 Erythranthe guttata HOM05D008202 ORTHO05D010302 7.8e-06 53.9 85 40.0


User provided reference genes

Program Settings