Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 0.0e+00 1116.3 577 100.0
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.9e-312 1074.3 575 97.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 9.0e-89 332.0 641 36.0
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.5e-75 288.1 623 36.1
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 4.8e-74 283.1 620 34.0
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 7.6e-72 275.8 595 35.3
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 9.9e-72 275.4 644 34.2
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 4.9e-71 273.1 623 35.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 6.0e-69 266.2 709 31.3
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.0e-63 248.8 586 32.3
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 8.4e-63 245.7 626 32.7
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.9e-62 244.6 532 34.8
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 5.5e-62 243.0 636 32.9
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-61 241.9 624 32.2
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-61 241.9 625 32.5
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 3.5e-61 240.4 583 33.3
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.0e-60 238.8 658 32.1
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-60 238.4 622 32.5
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.3e-60 238.4 642 31.2
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.7e-60 236.1 647 31.4
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 7.4e-59 232.6 616 32.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.4e-57 227.6 703 30.0
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 4.1e-57 226.9 582 33.5
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 9.0e-57 225.7 699 29.6
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.4e-56 223.8 710 30.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 4.5e-56 223.4 655 29.9
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 4.5e-56 223.4 636 31.0
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 7.7e-56 222.6 601 32.4
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 7.7e-56 222.6 605 31.1
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 7.7e-56 222.6 591 32.5
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.0e-55 222.2 626 30.7
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 3.8e-55 220.3 627 32.9
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.4e-54 218.4 610 32.1
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.2e-54 216.1 629 30.8
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 3.6e-53 213.8 627 31.6
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.1e-53 213.0 610 30.5
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 7.9e-53 212.6 574 33.4
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.5e-51 208.4 634 30.8
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.7e-51 206.5 607 30.5
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 3.7e-50 203.8 648 31.5
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 3.7e-50 203.8 602 30.7
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.8e-49 201.4 655 29.2
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 3.4e-48 197.2 658 28.6
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 3.2e-46 190.7 600 30.8
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 5.5e-46 189.9 572 29.9
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.0e-44 185.7 601 30.0
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.4e-44 185.3 478 34.1
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 6.7e-44 183.0 573 28.8
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 6.7e-44 183.0 625 30.6
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 5.7e-43 179.9 505 31.5
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 6.3e-42 176.4 583 28.5
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 8.2e-42 176.0 448 32.8
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.5e-40 171.8 144 59.7
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 6.5e-39 166.4 764 25.7
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.1e-38 165.6 553 27.7
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 4.2e-38 163.7 384 34.9
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 4.7e-37 160.2 755 24.8
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 6.1e-37 159.8 380 33.9
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 6.1e-37 159.8 637 29.2
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.0e-36 157.5 353 34.3
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 8.8e-36 156.0 818 26.5
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 8.8e-36 156.0 383 31.3
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 7.4e-35 152.9 329 35.0
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.3e-34 152.1 579 27.8
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.7e-34 151.8 521 29.8
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.2e-34 151.4 144 54.9
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.2e-34 151.4 156 53.2
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 4.8e-34 150.2 137 55.5
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.8e-33 148.3 454 30.4
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.4e-33 147.9 113 62.8
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 9.1e-33 146.0 227 41.9
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 2.6e-32 144.4 615 26.3
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 2.6e-32 144.4 127 55.1
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.3e-31 142.1 573 28.3
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 2.9e-31 141.0 316 32.3
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 5.0e-31 140.2 574 28.0
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 6.5e-31 139.8 770 24.5
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 8.5e-31 139.4 582 27.7
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 8.5e-31 139.4 582 27.8
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 1.5e-30 138.7 574 26.7
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.5e-30 137.9 689 25.5
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.2e-29 135.6 497 27.6
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.6e-29 135.2 597 24.1
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.6e-29 135.2 131 50.4
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 8.0e-29 132.9 136 47.1
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 8.0e-29 132.9 431 29.2
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 8.0e-29 132.9 227 37.9
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 1.8e-28 131.7 248 35.5
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 8.8e-28 129.4 329 33.1
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.5e-27 128.6 477 25.6
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 5.7e-27 126.7 603 26.9
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 4.8e-26 123.6 346 30.3
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.9e-22 111.7 308 29.9
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.5e-22 111.3 310 30.3
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 3.2e-22 110.9 304 30.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.2e-21 109.0 178 39.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 8.0e-21 106.3 335 29.6
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 6.8e-20 103.2 166 39.2
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 7.5e-19 99.8 352 29.5
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.7e-18 98.6 135 35.6
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.1e-17 94.4 145 35.2
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 3.5e-16 90.9 144 36.8
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.9e-14 85.1 139 36.0
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 7.2e-14 83.2 81 53.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.6e-13 82.0 136 33.1
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.6e-13 82.0 136 33.1
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.8e-12 78.6 118 40.7
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 2.3e-12 78.2 91 38.5
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 6.8e-12 76.6 127 29.1
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 7.5e-11 73.2 221 28.1
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 1.6e-08 65.5 481 25.2
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 8.6e-07 59.7 81 37.0
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.1e-06 59.3 78 35.9
Sc18g0002050 Simmondsia chinensis HOM05D006771 ORTHO05D008296 4.3e-06 57.4 109 33.0


User provided reference genes

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