Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 6.5e-66 253.8 121 100.0
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 8.0e-40 167.2 107 76.6
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 4.5e-35 151.4 108 67.6
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.1e-33 146.7 113 58.4
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 1.9e-33 146.0 87 75.9
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 1.9e-33 146.0 103 67.0
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 3.3e-33 145.2 98 68.4
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 9.5e-33 143.7 94 69.1
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 9.5e-33 143.7 97 70.1
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 1.6e-32 142.9 91 71.4
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 1.6e-32 142.9 101 64.4
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 2.1e-32 142.5 111 62.2
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 2.1e-32 142.5 89 71.9
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 4.7e-32 141.4 79 78.5
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 4.7e-32 141.4 99 68.7
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 4.7e-32 141.4 97 69.1
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 6.1e-32 141.0 89 70.8
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 8.0e-32 140.6 82 76.8
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 1.0e-31 140.2 98 66.3
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 1.0e-31 140.2 97 68.0
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.4e-31 139.8 113 56.6
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.4e-31 139.8 78 79.5
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.4e-31 139.8 78 79.5
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.4e-31 139.8 80 78.8
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 1.4e-31 139.8 84 79.8
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 1.8e-31 139.4 104 63.5
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.8e-31 139.4 95 70.5
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 2.3e-31 139.0 87 72.4
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 2.3e-31 139.0 89 75.3
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 3.0e-31 138.7 92 70.7
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 4.0e-31 138.3 104 64.4
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 5.2e-31 137.9 87 73.6
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 5.2e-31 137.9 98 65.3
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 5.2e-31 137.9 78 76.9
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 5.2e-31 137.9 74 83.8
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 5.2e-31 137.9 103 66.0
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 6.8e-31 137.5 89 74.2
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 6.8e-31 137.5 77 80.5
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 8.9e-31 137.1 107 63.6
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 1.2e-30 136.7 98 65.3
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 1.5e-30 136.3 74 82.4
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 1.5e-30 136.3 80 77.5
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 2.0e-30 136.0 74 82.4
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 2.0e-30 136.0 77 77.9
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 2.0e-30 136.0 100 63.0
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 2.6e-30 135.6 106 63.2
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 2.6e-30 135.6 72 83.3
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 3.4e-30 135.2 75 81.3
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 3.4e-30 135.2 75 81.3
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 4.4e-30 134.8 76 76.3
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 5.7e-30 134.4 74 77.0
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 5.7e-30 134.4 98 64.3
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 5.7e-30 134.4 101 64.4
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 7.5e-30 134.0 78 75.6
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 7.5e-30 134.0 74 77.0
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 7.5e-30 134.0 86 68.6
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 9.8e-30 133.7 91 69.2
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 9.8e-30 133.7 84 73.8
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 1.3e-29 133.3 82 72.0
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 1.3e-29 133.3 85 74.1
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 1.3e-29 133.3 102 62.7
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 1.7e-29 132.9 72 83.3
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 1.7e-29 132.9 86 67.4
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 2.2e-29 132.5 86 68.6
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 3.7e-29 131.7 100 65.0
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 3.7e-29 131.7 84 69.0
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 4.9e-29 131.3 71 81.7
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 4.9e-29 131.3 80 70.0
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 6.4e-29 131.0 93 65.6
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 8.3e-29 130.6 80 70.0
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 1.1e-28 130.2 73 78.1
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 1.1e-28 130.2 87 72.4
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 1.1e-28 130.2 98 65.3
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 1.1e-28 130.2 89 68.5
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 1.4e-28 129.8 107 60.7
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 1.4e-28 129.8 70 81.4
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 1.4e-28 129.8 91 65.9
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 1.4e-28 129.8 74 77.0
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.8e-28 129.4 99 64.6
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 2.4e-28 129.0 93 63.4
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 2.4e-28 129.0 113 57.5
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 3.2e-28 128.6 77 75.3
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 4.1e-28 128.3 77 75.3
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 4.1e-28 128.3 94 68.1
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 4.1e-28 128.3 92 65.2
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 5.4e-28 127.9 77 75.3
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 5.4e-28 127.9 73 79.5
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 5.4e-28 127.9 73 79.5
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 5.4e-28 127.9 73 79.5
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 5.4e-28 127.9 74 74.3
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 7.0e-28 127.5 70 80.0
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 1.2e-27 126.7 88 65.9
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.2e-27 126.7 99 64.6
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.2e-27 126.7 99 64.6
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 1.6e-27 126.3 75 73.3
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 3.5e-27 125.2 72 77.8
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.6e-27 124.8 68 79.4
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 5.9e-27 124.4 64 84.4
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 7.8e-27 124.0 94 63.8
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 1.3e-26 123.2 92 64.1
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 1.7e-26 122.9 68 77.9
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 5.0e-26 121.3 71 80.3
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 5.0e-26 121.3 80 72.5
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 5.4e-20 101.3 74 60.8
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 1.0e-18 97.1 72 59.7
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 5.0e-18 94.7 54 77.8
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 1.1e-17 93.6 54 77.8
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 1.1e-15 87.0 78 53.8
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 2.0e-14 82.8 70 52.9
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 4.4e-14 81.6 70 54.3
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 2.9e-13 79.0 65 56.9
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 6.4e-13 77.8 64 56.2
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 8.3e-13 77.4 38 81.6
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 2.4e-12 75.9 72 51.4
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.6e-11 73.2 40 77.5
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 1.0e-10 70.5 104 37.5
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.1e-07 60.5 43 58.1


User provided reference genes

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