Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 3.7e-216 754.6 382 100.0
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 2.9e-168 595.5 393 77.4
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 2.4e-167 592.4 396 76.8
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.6e-166 588.2 381 78.0
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.0e-166 587.8 381 78.2
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.8e-166 587.4 392 76.0
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.0e-165 587.0 373 79.1
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.3e-165 586.6 392 76.0
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.3e-165 585.9 389 74.8
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.1e-165 584.7 392 75.5
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 2.5e-164 582.4 369 78.6
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 5.6e-164 581.3 371 77.6
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 5.6e-164 581.3 389 76.1
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 2.1e-163 579.3 353 80.2
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 2.8e-163 578.9 382 76.4
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 6.2e-163 577.8 356 78.9
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 8.1e-163 577.4 390 74.9
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 8.1e-163 577.4 388 76.3
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 8.1e-163 577.4 388 76.3
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 2.4e-162 575.9 350 81.7
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 9.0e-162 573.9 370 77.6
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 2.6e-161 572.4 350 81.1
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 7.6e-161 570.9 359 79.4
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.3e-160 570.1 369 76.4
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 2.2e-160 569.3 390 73.6
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 2.2e-160 569.3 360 79.2
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.2e-160 569.3 383 76.5
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 3.8e-160 568.5 380 75.8
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 4.9e-160 568.2 361 78.7
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.1e-159 567.0 389 73.5
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.4e-159 566.6 385 75.1
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.4e-159 566.6 359 79.7
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.9e-159 566.2 378 74.3
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 3.2e-159 565.5 389 75.1
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 3.2e-159 565.5 370 77.6
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 3.2e-159 565.5 353 79.6
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.2e-159 565.1 391 73.1
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 5.4e-159 564.7 388 74.7
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 5.4e-159 564.7 388 74.7
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 7.1e-159 564.3 384 75.0
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 7.1e-159 564.3 389 73.0
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 9.3e-159 563.9 390 73.1
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 9.3e-159 563.9 382 74.1
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 9.3e-159 563.9 381 74.0
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.2e-158 563.5 365 77.0
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.2e-158 563.5 357 78.4
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.6e-158 563.1 359 77.4
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 3.5e-158 562.0 385 75.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 3.5e-158 562.0 366 77.6
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 3.5e-158 562.0 386 74.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 4.6e-158 561.6 386 73.8
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 4.6e-158 561.6 377 74.8
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 4.6e-158 561.6 402 71.4
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.6e-158 561.6 402 71.4
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 6.0e-158 561.2 358 76.8
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.8e-158 560.8 376 74.5
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 7.8e-158 560.8 392 74.2
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.0e-157 560.5 383 73.9
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.3e-157 560.1 359 77.2
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.3e-157 560.1 375 73.9
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.3e-157 560.1 372 75.8
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.3e-157 560.1 314 85.0
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 2.3e-157 559.3 336 81.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.9e-157 558.5 382 73.6
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 6.6e-157 557.8 378 75.9
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 8.7e-157 557.4 370 75.9
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.5e-156 556.6 397 72.5
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.9e-156 556.2 391 72.6
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 2.5e-156 555.8 388 73.2
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.5e-156 555.8 374 75.4
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 3.3e-156 555.4 393 73.8
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 4.3e-156 555.1 388 74.0
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 4.3e-156 555.1 370 75.4
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.6e-156 554.7 393 73.5
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 5.6e-156 554.7 384 74.5
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 7.3e-156 554.3 365 75.9
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 9.6e-156 553.9 384 74.2
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.8e-155 552.4 393 73.5
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 3.6e-155 552.0 381 72.7
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 8.1e-155 550.8 353 77.9
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 8.1e-155 550.8 382 73.0
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.1e-154 550.4 388 73.5
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.1e-154 550.4 387 73.6
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 1.1e-154 550.4 382 72.8
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.4e-154 550.1 381 71.9
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.8e-154 549.7 367 74.7
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 2.4e-154 549.3 363 75.5
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 2.4e-154 549.3 386 72.0
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 3.1e-154 548.9 388 73.5
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 3.1e-154 548.9 340 79.1
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.3e-154 548.1 382 72.5
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 9.0e-154 547.4 409 68.7
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.2e-153 547.0 366 75.4
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.2e-153 547.0 344 78.5
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.5e-153 546.6 373 71.6
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.5e-153 546.6 344 77.6
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 3.4e-153 545.4 338 78.4
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.5e-153 545.0 336 79.5
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 5.8e-153 544.7 385 72.2
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 9.9e-153 543.9 374 73.0
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.9e-152 541.6 373 73.7
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 4.9e-152 541.6 371 73.3
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 6.4e-152 541.2 362 76.0
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 6.4e-152 541.2 408 70.3
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 8.4e-152 540.8 339 78.8
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.1e-151 540.4 348 76.7
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 1.1e-151 540.4 327 80.1
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.4e-151 539.3 398 69.6
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 3.2e-151 538.9 479 60.5
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 9.3e-151 537.3 338 79.0
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 7.9e-150 534.3 375 72.3
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 3.9e-149 531.9 323 79.3
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 6.7e-149 531.2 372 71.8
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 6.7e-149 531.2 303 82.8
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 2.1e-147 526.2 390 71.3
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 4.8e-147 525.0 335 74.3
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.1e-146 523.9 356 72.2
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 5.3e-146 521.5 365 72.1
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.3e-144 516.9 330 76.7
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.4e-143 513.5 337 73.3
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 3.2e-143 512.3 362 71.3
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 4.2e-143 511.9 348 74.1
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 4.2e-143 511.9 300 81.7
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 4.5e-137 491.9 390 66.9
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 4.5e-137 491.9 359 69.6
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.8e-136 488.8 372 70.2
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.9e-135 486.5 388 66.2
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 3.5e-134 482.3 315 78.1
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 1.3e-133 480.3 371 65.8
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.3e-133 480.3 332 71.7
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 3.9e-133 478.8 294 81.6
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.5e-132 476.9 395 66.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 9.0e-130 467.6 309 76.7
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.2e-129 467.2 346 70.2
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 5.9e-129 464.9 271 81.9
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 6.5e-128 461.5 360 60.6
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 7.2e-127 458.0 310 69.0
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.7e-123 446.8 309 66.3
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.7e-123 446.8 308 67.2
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.8e-122 443.4 259 82.6
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.4e-122 443.0 347 61.4
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.1e-119 434.1 372 61.0
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.4e-117 427.2 334 61.7
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.1e-116 424.1 363 60.6
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.1e-114 416.0 335 60.6
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 9.1e-114 414.5 408 57.1
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 5.0e-112 408.7 221 89.1
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 5.5e-111 405.2 373 59.5
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 6.1e-102 375.2 233 78.5
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 2.0e-92 343.6 329 53.5
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 7.0e-90 335.1 221 68.3
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 4.9e-83 312.4 253 68.0
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 1.5e-68 264.2 150 82.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.9e-63 247.3 370 44.6
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.3e-56 224.6 169 66.9
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 3.0e-56 223.4 191 57.1
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 6.4e-43 179.1 164 56.1
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 2.3e-32 144.1 96 75.0
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.8e-29 134.4 284 32.4
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 1.7e-27 127.9 100 64.0
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 2.7e-25 120.6 337 29.1
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 1.1e-23 115.2 324 28.7
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.1e-23 115.2 65 80.0
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.4e-20 103.6 246 33.7
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.2e-17 95.1 377 25.5
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.1e-17 94.4 79 62.0
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 2.7e-17 94.0 68 69.1
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 2.7e-17 94.0 68 69.1
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.3e-16 90.9 92 58.7
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.3e-16 90.9 68 67.6
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-15 88.6 59 69.5
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 2.8e-14 84.0 91 53.8
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.3e-11 75.1 133 32.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.6e-09 68.2 33 93.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 3.9e-08 63.5 49 63.3
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 4.3e-07 60.1 39 74.4
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 4.3e-07 60.1 39 74.4
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 4.3e-07 60.1 39 74.4


User provided reference genes

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