Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03370 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.0e-59 231.9 137 100.0
Eucgr.C03587 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.1e-35 151.4 115 79.1
Eucgr.C03594 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.6e-34 149.1 110 88.2
Eucgr.L00451 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.6e-34 149.1 116 69.8
Eucgr.L00448 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.8e-33 144.8 107 71.0
Eucgr.C03366 Eucalyptus grandis HOM05D000448 ORTHO05D000291 7.0e-32 141.0 109 70.6
Eucgr.C03399 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.2e-31 140.2 105 87.6
Eucgr.L00452 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.2e-31 140.2 104 70.2
Eucgr.C03383 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.1e-29 133.7 113 80.5
Eucgr.L00453 Eucalyptus grandis HOM05D000448 ORTHO05D000291 7.7e-23 110.9 82 70.7
Eucgr.C03604 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.2e-22 109.4 84 69.0
Eucgr.L00455 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.2e-21 105.1 80 92.5
Eucgr.C03608 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.2e-20 103.6 80 87.5
Eucgr.L00436 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.6e-20 103.2 82 86.6
Eucgr.C03211 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.7e-20 101.7 77 93.5
Eucgr.C03392 Eucalyptus grandis HOM05D000448 ORTHO05D000291 6.1e-20 101.3 80 90.0
Eucgr.C02980 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.4e-19 100.1 77 92.2
Eucgr.L00439 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.4e-19 100.1 77 92.2
Eucgr.C03581 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.0e-19 98.6 80 87.5
Eucgr.C03599 Eucalyptus grandis HOM05D000448 ORTHO05D000291 6.8e-19 97.8 76 92.1
Eucgr.C03917 Eucalyptus grandis HOM05D000448 ORTHO05D000291 6.8e-19 97.8 82 85.4
Eucgr.C03388 Eucalyptus grandis HOM05D000448 ORTHO05D000291 8.8e-19 97.4 80 88.8
Eucgr.C03379 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.2e-18 97.1 77 90.9
Eucgr.C03572 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.2e-18 97.1 77 90.9
Eucgr.C03607 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.4e-18 95.1 80 83.8
Eucgr.L00437 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.8e-16 89.7 80 62.5
Eucgr.C03596 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.1e-16 89.0 77 64.9
Eucgr.C03374 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.5e-15 85.5 71 90.1
Eucgr.C03612 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.5e-15 85.5 92 70.7
Eucgr.C03613 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.0e-14 84.0 82 59.8
TAR383G0315 Trochodendron aralioides HOM05D000448 ORTHO05D000291 2.9e-14 82.4 134 48.5
Manes.10G126966 Manihot esculenta HOM05D000448 ORTHO05D000291 8.5e-14 80.9 117 45.3
Eucgr.C03401 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.2e-13 78.6 77 58.4
GSVIVG01015125001 Vitis vinifera HOM05D000448 ORTHO05D000291 1.6e-12 76.6 110 44.5
EL10Ac7g16389 Beta vulgaris HOM05D000448 ORTHO05D000291 5.2e-11 71.6 117 31.6
Eucgr.C03616 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.2e-10 70.5 73 53.4
Eucgr.C03591 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.6e-10 69.3 69 82.6
Nn1g04194 Nelumbo nucifera HOM05D000448 ORTHO05D000291 3.4e-10 68.9 113 31.9
Duzib235G1327 Durio zibethinus HOM05D000448 ORTHO05D000291 7.5e-10 67.8 101 37.6
vmacro17436 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 7.5e-10 67.8 122 33.6
Ah.08g216570 Amaranthus hybridus HOM05D000448 ORTHO05D000291 9.8e-10 67.4 139 41.7
Eucgr.C03576 Eucalyptus grandis HOM05D000448 ORTHO05D000291 9.8e-10 67.4 69 81.2
GSVIVG01015126001 Vitis vinifera HOM05D000448 ORTHO05D000291 9.8e-10 67.4 82 40.2
Ah.08g216580 Amaranthus hybridus HOM05D000448 ORTHO05D000291 1.3e-09 67.0 120 32.5
Manes.10G125500 Manihot esculenta HOM05D000448 ORTHO05D000291 1.7e-09 66.6 95 55.8
AUR62009255 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.7e-09 65.5 131 31.3
MBI18_g43125_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 3.7e-09 65.5 80 40.0
EL10Ac7g16388 Beta vulgaris HOM05D000448 ORTHO05D000291 4.8e-09 65.1 118 32.2
GSVIVG01035440001 Vitis vinifera HOM05D000448 ORTHO05D000291 8.3e-09 64.3 110 51.8
AUR62001506 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.4e-08 63.5 126 30.2
Actinidia25704 Actinidia chinensis HOM05D000448 ORTHO05D000291 1.8e-08 63.2 107 33.6
AUR62009251 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.8e-08 63.2 105 33.3
AUR62043845 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.8e-08 63.2 105 32.4
Eucgr.C03375 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.8e-08 63.2 35 85.7
Eucgr.B00705 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.4e-08 62.8 94 52.1
SalBow1G3063 Salvia bowleyana HOM05D000448 ORTHO05D000291 3.1e-08 62.4 109 51.4
Oeu047502.1 Olea europaea HOM05D000448 ORTHO05D000291 4.1e-08 62.0 143 39.9
PSO478G0034 Papaver somniferum HOM05D000448 ORTHO05D000291 4.1e-08 62.0 108 33.3
AUR62001038 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.4e-08 61.6 109 35.8
Hma1.2p1_2573F.1_g324643 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 5.4e-08 61.6 101 52.5
Hma1.2p1_2573F.1_g324650 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 5.4e-08 61.6 101 52.5
CSS0025223 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 7.0e-08 61.2 115 32.2
Eucgr.L00445 Eucalyptus grandis HOM05D000448 ORTHO05D000291 7.0e-08 61.2 34 85.3
Hma1.2p1_2573F.1_g324636 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 7.0e-08 61.2 101 52.5
Hund18695 Selenicereus undatus HOM05D000448 ORTHO05D000291 1.2e-07 60.5 136 29.4
CSS0043523 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.6e-07 60.1 104 38.5
SalBow1G7265 Salvia bowleyana HOM05D000448 ORTHO05D000291 1.6e-07 60.1 93 33.3
CANSAT25G2897 Cannabis sativa HOM05D000448 ORTHO05D000291 2.0e-07 59.7 90 52.2
QL05p009022 Quercus lobata HOM05D000448 ORTHO05D000291 2.0e-07 59.7 119 39.5
Eucgr.C00680 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.7e-07 59.3 112 30.4
Eucgr.C00697 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.7e-07 59.3 112 43.8
HanXRQChr11g0352041 Helianthus annuus HOM05D000454 ORTHO05D002637 2.7e-07 59.3 91 35.2
Hund18696 Selenicereus undatus HOM05D000448 ORTHO05D000291 2.7e-07 59.3 104 46.2
Ciclev10008164m.g Citrus clementina HOM05D000448 ORTHO05D000291 3.5e-07 58.9 83 50.6
Migut.L01539 Erythranthe guttata HOM05D000448 ORTHO05D000291 3.5e-07 58.9 107 28.0
FAN24G3054 Fragaria x ananassa HOM05D000448 ORTHO05D000291 3.5e-07 58.9 100 51.0
Lsat_1_v5_gn_5_31161 Lactuca sativa HOM05D000448 ORTHO05D000291 4.5e-07 58.5 101 32.7
TAR628G1068 Trochodendron aralioides HOM05D000448 ORTHO05D000291 4.5e-07 58.5 90 52.2
Ciclev10003826m.g Citrus clementina HOM05D000448 ORTHO05D000291 5.9e-07 58.2 103 33.0
Lsat_1_v5_gn_5_30860 Lactuca sativa HOM05D000448 ORTHO05D000291 5.9e-07 58.2 105 31.4
GSVIVG01030638001 Vitis vinifera HOM05D000480 ORTHO05D000313 5.9e-07 58.2 112 31.2
Ah.16g105930 Amaranthus hybridus HOM05D000448 ORTHO05D000291 7.7e-07 57.8 86 33.7
CiPaw.04G072700 Carya illinoinensis HOM05D000448 ORTHO05D000291 7.7e-07 57.8 93 33.3
Lj4A903G13 Lonicera japonica HOM05D000448 ORTHO05D000291 7.7e-07 57.8 112 33.9
HanXRQChr12g0358831 Helianthus annuus HOM05D000448 ORTHO05D000291 1.0e-06 57.4 85 47.1
AUR62001505 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-06 57.0 116 47.4
Sc23g0005360 Simmondsia chinensis HOM05D000448 ORTHO05D000291 1.3e-06 57.0 95 53.7
CSS0011346 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.7e-06 56.6 103 42.7
AUR62043844 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.7e-06 56.6 115 31.3
Cc08_g11110 Coffea canephora HOM05D000448 ORTHO05D000291 1.7e-06 56.6 86 53.5
Eucgr.E02801 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.7e-06 56.6 81 35.8
CSS0023638 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.3e-06 56.2 108 35.2
CiPaw.03G111800 Carya illinoinensis HOM05D000448 ORTHO05D000291 2.3e-06 56.2 118 31.4
Cc02_g31560 Coffea canephora HOM05D000448 ORTHO05D000291 2.9e-06 55.8 86 53.5
SalBow1G1441 Salvia bowleyana HOM05D000448 ORTHO05D000291 2.9e-06 55.8 100 46.0
THA.LOC104811543 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 2.9e-06 55.8 112 31.2
Actinidia03310 Actinidia chinensis HOM05D000448 ORTHO05D000291 3.8e-06 55.5 93 53.8
CiPaw.03G112000 Carya illinoinensis HOM05D000448 ORTHO05D000291 3.8e-06 55.5 94 37.2
AUR62008891 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.8e-06 55.5 101 32.7
ECA234G0126 Erigeron canadensis HOM05D000448 ORTHO05D000291 3.8e-06 55.5 93 47.3
Oeu018032.1 Olea europaea HOM05D000448 ORTHO05D000291 3.8e-06 55.5 113 31.0
Rhsim07G0188200 Rhododendron simsii HOM05D000448 ORTHO05D000291 3.8e-06 55.5 90 32.2
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.8e-06 55.5 120 33.3
MSTRG.10528 Avicennia marina HOM05D000448 ORTHO05D000291 5.0e-06 55.1 82 36.6
CSS0028482 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 5.0e-06 55.1 93 34.4
Duzib192G0323 Durio zibethinus HOM05D000448 ORTHO05D000291 5.0e-06 55.1 106 47.2
Eucgr.C00686 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.0e-06 55.1 104 37.5
Peaxi162Scf01379g00001 Petunia axillaris HOM05D000264 ORTHO05D002637 5.0e-06 55.1 63 41.3
RcHm_v2.0_Chr6g0311481 Rosa chinensis HOM05D000448 ORTHO05D000291 5.0e-06 55.1 101 31.7
SalBow3G2035 Salvia bowleyana HOM05D000448 ORTHO05D000291 5.0e-06 55.1 103 45.6
CANSAT25G2827 Cannabis sativa HOM05D000448 ORTHO05D000291 6.6e-06 54.7 111 50.5
FAN15G2979 Fragaria x ananassa HOM05D000448 ORTHO05D000291 6.6e-06 54.7 84 36.9
FAN27G1920 Fragaria x ananassa HOM05D000448 ORTHO05D000291 6.6e-06 54.7 83 34.9
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 6.6e-06 54.7 119 28.6
Peaxi162Scf00565g00077 Petunia axillaris HOM05D000448 ORTHO05D000291 6.6e-06 54.7 60 40.0
CANSAT56G0201 Cannabis sativa HOM05D000448 ORTHO05D000291 8.6e-06 54.3 113 46.9
Cc08_g01420 Coffea canephora HOM05D000448 ORTHO05D000291 8.6e-06 54.3 86 52.3
Eucgr.C00683 Eucalyptus grandis HOM05D000448 ORTHO05D000291 8.6e-06 54.3 110 29.1
FAN20G1233 Fragaria x ananassa HOM05D000448 ORTHO05D000291 8.6e-06 54.3 100 47.0
Sed0013407 Sechium edule HOM05D000448 ORTHO05D000291 8.6e-06 54.3 114 46.5


User provided reference genes

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