Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 1.4e-83 313.2 186 100.0
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.4e-19 100.5 193 39.4
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 3.1e-19 99.4 187 38.5
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 4.1e-19 99.0 190 37.9
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 7.0e-19 98.2 193 38.9
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 7.0e-19 98.2 199 39.2
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 1.6e-18 97.1 196 35.7
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 3.5e-18 95.9 187 39.6
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 7.8e-18 94.7 190 37.4
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 1.0e-17 94.4 187 36.9
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 1.7e-17 93.6 187 37.4
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 1.7e-17 93.6 187 37.4
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 2.3e-17 93.2 195 37.4
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 3.9e-17 92.4 188 38.3
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 3.9e-17 92.4 184 35.9
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.0e-17 92.0 197 38.6
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.0e-17 92.0 196 38.3
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.5e-16 90.5 190 40.0
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.9e-16 90.1 198 36.4
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.9e-16 90.1 192 37.5
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 2.5e-16 89.7 197 41.6
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 3.3e-16 89.4 193 35.2
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 5.6e-16 88.6 187 39.6
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.3e-16 88.2 196 37.2
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 7.3e-16 88.2 196 37.2
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 9.5e-16 87.8 189 38.6
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 1.2e-15 87.4 187 37.4
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 1.2e-15 87.4 187 37.4
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 1.2e-15 87.4 186 38.7
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.6e-15 87.0 195 39.5
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 1.6e-15 87.0 195 35.4
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 2.1e-15 86.7 187 37.4
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 2.1e-15 86.7 187 37.4
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 2.8e-15 86.3 187 36.4
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.8e-15 86.3 200 37.0
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 3.6e-15 85.9 189 34.9
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 3.6e-15 85.9 186 34.4
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.7e-15 85.5 187 35.3
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 4.7e-15 85.5 187 34.2
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 1.0e-14 84.3 190 36.3
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.0e-14 84.3 188 34.6
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.4e-14 84.0 194 35.6
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.8e-14 83.6 193 34.7
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.3e-14 83.2 183 35.5
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 3.1e-14 82.8 183 37.2
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 3.1e-14 82.8 193 34.7
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 4.0e-14 82.4 213 37.1
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 4.0e-14 82.4 190 35.8
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 4.0e-14 82.4 195 34.9
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 6.8e-14 81.6 192 34.9
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 6.8e-14 81.6 195 31.8
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 8.9e-14 81.3 187 35.3
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 8.9e-14 81.3 191 34.6
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 8.9e-14 81.3 196 35.2
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 1.2e-13 80.9 190 35.8
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 1.2e-13 80.9 190 35.8
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.2e-13 80.9 185 36.2
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.5e-13 80.5 197 37.6
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.0e-13 80.1 200 37.0
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 2.6e-13 79.7 199 35.7
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.6e-13 79.7 199 35.7
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 3.4e-13 79.3 193 34.7
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 3.4e-13 79.3 195 37.4
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 3.4e-13 79.3 189 35.4
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 5.8e-13 78.6 184 35.3
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 1.3e-12 77.4 185 29.2
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 1.7e-12 77.0 202 41.6
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.7e-12 77.0 215 31.6
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.7e-12 77.0 188 32.4
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 1.7e-12 77.0 188 36.2
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.2e-12 76.6 189 34.4
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.2e-12 76.6 192 34.9
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 2.2e-12 76.6 185 35.1
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 4.9e-12 75.5 185 34.6
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 4.9e-12 75.5 193 33.2
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 8.3e-12 74.7 192 33.3
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 8.3e-12 74.7 182 33.5
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.1e-11 74.3 185 36.8
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 1.1e-11 74.3 193 33.2
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 1.4e-11 73.9 189 31.7
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.4e-11 73.9 184 35.3
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 2.4e-11 73.2 193 33.2
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 4.1e-11 72.4 192 32.3
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 5.4e-11 72.0 196 32.7
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 7.0e-11 71.6 196 30.6
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 9.2e-11 71.2 190 34.2
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 1.6e-10 70.5 194 30.9
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.0e-10 70.1 210 31.0
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 4.6e-10 68.9 201 29.9
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 7.8e-10 68.2 187 28.9
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 7.8e-10 68.2 191 33.5
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.0e-09 67.8 188 33.0
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 1.3e-09 67.4 182 31.3
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.7e-09 67.0 189 39.7
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.3e-09 66.6 196 32.1
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 1.5e-08 63.9 190 40.0
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 3.3e-08 62.8 189 31.7
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 5.6e-08 62.0 183 33.3
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 9.5e-08 61.2 198 32.8
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 1.2e-07 60.8 168 34.5
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 1.2e-07 60.8 198 32.8
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 2.8e-07 59.7 195 32.3
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 2.8e-07 59.7 202 31.2
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 3.6e-07 59.3 226 32.3
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.4e-06 57.4 183 30.1
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 4.0e-06 55.8 208 28.4
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 4.0e-06 55.8 187 29.9
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 4.0e-06 55.8 194 30.4
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 5.2e-06 55.5 182 30.2
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 8.9e-06 54.7 195 29.2


User provided reference genes

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