Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.1e-64 248.8 124 100.0
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 9.0e-55 216.9 115 93.9
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.2e-53 212.2 115 92.2
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.2e-52 208.4 115 90.4
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 3.1e-47 191.8 113 83.2
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 3.1e-47 191.8 115 81.7
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 7.7e-46 187.2 115 80.0
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 1.0e-45 186.8 115 80.0
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.0e-45 186.8 115 81.7
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.7e-45 186.0 112 80.4
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 2.2e-45 185.7 115 80.9
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 2.9e-45 185.3 115 78.3
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 3.8e-45 184.9 113 78.8
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 3.8e-45 184.9 113 80.5
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 5.0e-45 184.5 115 78.3
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 6.5e-45 184.1 113 78.8
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 1.4e-44 183.0 113 79.6
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 2.5e-44 182.2 113 77.9
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.5e-44 181.0 115 83.5
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 5.5e-44 181.0 113 76.1
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 5.5e-44 181.0 113 78.8
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 7.2e-44 180.6 113 78.8
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 7.2e-44 180.6 115 76.5
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 7.2e-44 180.6 115 77.4
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 7.2e-44 180.6 115 77.4
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 9.4e-44 180.3 112 78.6
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 1.2e-43 179.9 112 77.7
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 1.6e-43 179.5 112 78.6
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 1.6e-43 179.5 115 75.7
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 1.6e-43 179.5 115 76.5
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 1.6e-43 179.5 115 78.3
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 1.6e-43 179.5 115 77.4
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 2.1e-43 179.1 113 77.0
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 2.1e-43 179.1 115 75.7
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 2.1e-43 179.1 113 77.9
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.7e-43 178.7 112 77.7
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 3.6e-43 178.3 112 78.6
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 3.6e-43 178.3 113 75.2
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 3.6e-43 178.3 113 76.1
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 3.6e-43 178.3 113 77.0
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 4.6e-43 177.9 113 77.0
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 4.6e-43 177.9 115 75.7
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 4.6e-43 177.9 115 74.8
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 6.1e-43 177.6 112 76.8
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 7.9e-43 177.2 113 75.2
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.0e-42 176.8 115 75.7
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.0e-42 176.8 115 75.7
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 1.0e-42 176.8 115 75.7
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.0e-42 176.8 115 75.7
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 1.4e-42 176.4 115 74.8
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.4e-42 176.4 115 74.8
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.4e-42 176.4 115 74.8
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 1.4e-42 176.4 113 76.1
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 1.8e-42 176.0 112 76.8
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 1.8e-42 176.0 115 74.8
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.3e-42 175.6 115 73.9
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 2.3e-42 175.6 112 76.8
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.0e-42 175.3 112 76.8
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 3.9e-42 174.9 115 75.7
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 3.9e-42 174.9 115 73.9
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 5.1e-42 174.5 115 76.5
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 5.1e-42 174.5 115 73.9
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 5.1e-42 174.5 115 73.9
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 6.7e-42 174.1 115 73.9
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 6.7e-42 174.1 113 74.3
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 8.8e-42 173.7 112 74.1
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 2.0e-41 172.6 112 74.1
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 2.0e-41 172.6 115 72.2
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 2.0e-41 172.6 115 73.0
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.5e-41 172.2 115 73.9
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 2.5e-41 172.2 115 73.9
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 2.5e-41 172.2 115 73.9
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 3.3e-41 171.8 115 73.9
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 3.3e-41 171.8 112 75.9
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 3.3e-41 171.8 112 72.3
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 4.3e-41 171.4 115 73.9
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 4.3e-41 171.4 115 72.2
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 5.7e-41 171.0 113 74.3
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 5.7e-41 171.0 113 74.3
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 5.7e-41 171.0 112 74.1
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 7.4e-41 170.6 115 73.0
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 9.7e-41 170.2 112 73.2
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 9.7e-41 170.2 115 72.2
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 1.7e-40 169.5 115 72.2
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 1.7e-40 169.5 115 73.0
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 1.7e-40 169.5 112 70.5
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 2.2e-40 169.1 112 72.3
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 2.2e-40 169.1 115 72.2
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 4.8e-40 167.9 112 72.3
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 4.8e-40 167.9 112 75.0
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 6.3e-40 167.5 112 72.3
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 6.3e-40 167.5 112 71.4
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 6.3e-40 167.5 112 72.3
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 8.2e-40 167.2 112 73.2
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 8.2e-40 167.2 104 78.8
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 8.2e-40 167.2 115 71.3
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.1e-39 166.8 105 79.0
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.4e-39 166.4 113 70.8
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.4e-39 166.4 105 79.0
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 1.4e-39 166.4 115 72.2
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 1.8e-39 166.0 115 72.2
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 2.4e-39 165.6 112 71.4
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 2.4e-39 165.6 112 71.4
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 2.4e-39 165.6 113 69.9
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 5.3e-39 164.5 112 71.4
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 5.3e-39 164.5 112 70.5
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 5.3e-39 164.5 112 70.5
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 5.3e-39 164.5 112 70.5
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 5.3e-39 164.5 112 71.4
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 5.3e-39 164.5 115 70.4
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 9.1e-39 163.7 112 70.5
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 1.5e-38 162.9 113 73.5
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 2.6e-38 162.2 113 69.9
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.6e-38 162.2 89 93.3
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 3.4e-38 161.8 112 67.0
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.0e-37 160.2 112 68.8
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 2.9e-37 158.7 112 67.0
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 2.5e-36 155.6 104 76.0
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 2.5e-36 155.6 113 64.6
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.2e-35 153.3 112 67.9
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 5.0e-29 131.3 112 54.5
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 3.2e-28 128.6 79 79.7
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 5.7e-25 117.9 114 51.8
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 4.8e-16 88.2 66 65.2


User provided reference genes

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