Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 3.9e-117 424.9 222 100.0
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 2.8e-67 259.2 193 71.0
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 8.0e-62 241.1 223 61.9
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 8.0e-62 241.1 221 62.4
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 3.0e-61 239.2 226 59.7
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 2.8e-59 232.6 205 63.9
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 2.8e-59 232.6 226 59.3
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.8e-58 229.9 225 59.1
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 1.8e-58 229.9 201 63.7
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 2.4e-58 229.6 222 57.2
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 2.4e-58 229.6 205 63.4
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 1.6e-57 226.9 219 58.9
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 1.6e-57 226.9 218 60.6
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 3.5e-57 225.7 224 59.8
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.5e-57 225.7 222 56.8
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 4.5e-57 225.3 221 57.5
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 5.9e-57 224.9 219 56.2
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 1.0e-56 224.2 219 58.4
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 1.7e-56 223.4 189 59.8
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 1.7e-56 223.4 207 62.8
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.7e-56 223.4 222 56.8
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 6.6e-56 221.5 189 64.6
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 6.6e-56 221.5 241 53.5
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 1.5e-55 220.3 214 59.8
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 1.9e-55 219.9 221 60.2
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 2.5e-55 219.5 223 58.3
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 3.3e-55 219.2 219 57.1
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 3.3e-55 219.2 201 59.7
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 4.3e-55 218.8 194 62.4
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 5.6e-55 218.4 194 62.9
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 9.5e-55 217.6 222 55.9
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 1.6e-54 216.9 229 53.3
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.6e-54 216.9 225 55.6
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 2.8e-54 216.1 232 56.9
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 2.8e-54 216.1 203 58.1
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 4.7e-54 215.3 203 57.1
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 6.1e-54 214.9 220 55.0
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 6.1e-54 214.9 219 57.1
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 8.0e-54 214.5 222 55.0
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 1.0e-53 214.2 195 59.0
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 1.8e-53 213.4 223 55.6
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 1.8e-53 213.4 220 55.5
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 6.8e-53 211.5 222 55.0
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 8.9e-53 211.1 179 63.7
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.5e-52 210.3 179 63.7
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 2.0e-52 209.9 221 54.8
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 2.0e-52 209.9 222 52.3
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 2.6e-52 209.5 221 53.4
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 5.7e-52 208.4 221 54.3
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 5.7e-52 208.4 221 54.3
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 5.7e-52 208.4 221 54.3
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.3e-51 207.2 208 55.3
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.3e-51 207.2 219 56.2
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 1.7e-51 206.8 223 52.5
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 6.4e-51 204.9 222 52.3
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.4e-50 203.8 222 52.7
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 1.8e-50 203.4 222 52.7
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 3.2e-50 202.6 223 54.3
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 4.1e-50 202.2 220 54.5
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 7.0e-50 201.4 199 55.8
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 9.2e-50 201.1 190 58.9
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.6e-49 200.3 128 75.8
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 1.6e-49 200.3 223 54.7
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 5.9e-49 198.4 230 50.4
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 1.7e-48 196.8 225 52.4
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 2.3e-48 196.4 185 58.4
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 2.3e-48 196.4 154 66.9
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.9e-47 193.4 224 52.2
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 3.3e-47 192.6 215 54.0
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 5.6e-47 191.8 215 53.5
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 7.3e-47 191.4 223 52.5
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 7.3e-47 191.4 221 53.4
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 1.6e-46 190.3 303 41.3
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 3.6e-46 189.1 187 57.2
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.0e-45 187.6 180 55.6
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 5.2e-45 185.3 212 51.9
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 2.6e-44 183.0 175 61.1
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 9.8e-44 181.0 154 62.3
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 9.8e-44 181.0 145 62.1
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 2.9e-43 179.5 145 62.8
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 3.7e-43 179.1 156 56.4
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 2.0e-41 173.3 128 66.4
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 2.0e-41 173.3 217 52.1
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 3.5e-41 172.6 198 54.0
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 1.0e-40 171.0 147 57.8
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.3e-40 170.6 211 49.3
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 1.5e-39 167.2 183 51.4
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.6e-38 163.7 233 46.4
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 8.1e-38 161.4 159 56.6
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 1.8e-37 160.2 136 60.3
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.6e-33 147.1 233 44.2
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.5e-31 140.6 213 44.6
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 6.9e-21 105.1 217 35.9
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 2.9e-19 99.8 176 38.1
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 3.8e-19 99.4 156 44.2
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 6.4e-19 98.6 176 38.6
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 4.6e-17 92.4 88 59.1
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 3.6e-14 82.8 202 32.2
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 1.3e-11 74.3 66 54.5
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 1.5e-07 60.8 104 35.6


User provided reference genes

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