Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03135 Eucalyptus grandis HOM05D005107 ORTHO05D006200 8.8e-69 263.5 130 100.0
Eucgr.J01240 Eucalyptus grandis HOM05D005107 ORTHO05D006200 5.7e-68 260.8 130 99.2
Eucgr.B00249 Eucalyptus grandis HOM05D005107 ORTHO05D006200 1.3e-64 249.6 130 95.4
Eucgr.C04410 Eucalyptus grandis HOM05D005107 ORTHO05D006200 2.2e-64 248.8 130 95.4
GSVIVG01007704001 Vitis vinifera HOM05D005107 ORTHO05D006200 1.6e-54 216.1 129 76.7
CiPaw.11G023500 Carya illinoinensis HOM05D005107 ORTHO05D006200 3.0e-53 211.8 129 75.2
PGR083G1692 Punica granatum HOM05D005107 ORTHO05D006200 1.2e-52 209.9 129 76.0
COL.COLO4_30099 Corchorus olitorius HOM05D005107 ORTHO05D006200 2.6e-52 208.8 129 74.4
Thecc.03G018700 Theobroma cacao HOM05D005107 ORTHO05D006200 7.5e-52 207.2 129 72.9
TAR622G1391 Trochodendron aralioides HOM05D005107 ORTHO05D006200 8.3e-51 203.8 129 72.9
Cpa.g.sc153.5 Carica papaya HOM05D005107 ORTHO05D006200 1.1e-50 203.4 129 73.6
Atru.chr9.2518 Acer truncatum HOM05D005107 ORTHO05D006200 1.8e-50 202.6 129 72.9
QL10p008945 Quercus lobata HOM05D005107 ORTHO05D006200 3.1e-50 201.8 129 69.8
Prupe.5G170500 Prunus persica HOM05D005107 ORTHO05D006200 5.4e-50 201.1 129 72.1
Dinv20630 Davidia involucrata HOM05D005107 ORTHO05D006200 1.2e-49 199.9 129 72.1
Gohir.A12G272600 Gossypium hirsutum HOM05D005107 ORTHO05D006200 2.0e-49 199.1 129 68.2
TAR374G1030 Trochodendron aralioides HOM05D005107 ORTHO05D006200 4.5e-49 198.0 129 73.6
RcHm_v2.0_Chr7g0193181 Rosa chinensis HOM05D005107 ORTHO05D006200 7.8e-49 197.2 129 71.3
Gohir.A07G063500 Gossypium hirsutum HOM05D005107 ORTHO05D006200 1.3e-48 196.4 129 66.7
Gorai.001G071700 Gossypium raimondii HOM05D005107 ORTHO05D006200 1.3e-48 196.4 129 66.7
Gohir.D07G068200 Gossypium hirsutum HOM05D005107 ORTHO05D006200 1.7e-48 196.1 129 65.9
Gorai.008G293700 Gossypium raimondii HOM05D005107 ORTHO05D006200 1.7e-48 196.1 129 67.4
Hma1.2p1_0046F.1_g026720 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 1.7e-48 196.1 129 67.4
Gohir.D12G273300 Gossypium hirsutum HOM05D005107 ORTHO05D006200 2.3e-48 195.7 129 66.7
Haze_07542 Corylus avellana HOM05D005107 ORTHO05D006200 2.9e-48 195.3 129 68.2
MD06G1170900 Malus domestica HOM05D005107 ORTHO05D006200 2.9e-48 195.3 129 69.0
Sc22g0001200 Simmondsia chinensis HOM05D005107 ORTHO05D006200 2.9e-48 195.3 129 65.9
AUR62018143 Chenopodium quinoa HOM05D005107 ORTHO05D006200 5.0e-48 194.5 129 69.0
FvH4_5g05630 Fragaria vesca HOM05D005107 ORTHO05D006200 6.6e-48 194.1 129 69.8
FAN04G1011 Fragaria x ananassa HOM05D005107 ORTHO05D006200 8.6e-48 193.7 129 69.8
FAN08G1807 Fragaria x ananassa HOM05D005107 ORTHO05D006200 8.6e-48 193.7 129 69.8
MD14G1176600 Malus domestica HOM05D005107 ORTHO05D006200 1.1e-47 193.4 129 67.4
SalBow5G2679 Salvia bowleyana HOM05D005107 ORTHO05D006200 1.5e-47 193.0 129 67.4
FAN18G1528 Fragaria x ananassa HOM05D005107 ORTHO05D006200 1.9e-47 192.6 129 69.0
CSS0000196 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 2.5e-47 192.2 129 69.8
Migut.O00123 Erythranthe guttata HOM05D005107 ORTHO05D006200 2.5e-47 192.2 129 67.4
Oeu016417.1 Olea europaea HOM05D005107 ORTHO05D006200 2.5e-47 192.2 128 68.0
Potri.015G079700 Populus trichocarpa HOM05D005107 ORTHO05D006200 3.3e-47 191.8 129 67.4
Duzib205G0074 Durio zibethinus HOM05D005107 ORTHO05D006200 5.6e-47 191.0 129 68.2
Nitab4.5_0003229g0090 Nicotiana tabacum HOM05D005107 ORTHO05D006200 5.6e-47 191.0 129 69.8
Nitab4.5_0001207g0070 Nicotiana tabacum HOM05D005107 ORTHO05D006200 7.3e-47 190.7 129 69.8
PGSC0003DMG401018164 Solanum tuberosum HOM05D005107 ORTHO05D006200 7.3e-47 190.7 129 69.0
MBI10_g44387_MAGBIO Magnolia biondii HOM05D005107 ORTHO05D006200 1.2e-46 189.9 129 65.9
Potri.012G088600 Populus trichocarpa HOM05D005107 ORTHO05D006200 1.6e-46 189.5 129 69.0
CANSAT80G2623 Cannabis sativa HOM05D005107 ORTHO05D006200 2.1e-46 189.1 129 67.4
Nn4g22685 Nelumbo nucifera HOM05D005107 ORTHO05D006200 3.6e-46 188.3 129 69.0
Nn4g22690 Nelumbo nucifera HOM05D005107 ORTHO05D006200 3.6e-46 188.3 129 69.0
Sabra12G0063800 Salix brachista HOM05D005107 ORTHO05D006200 3.6e-46 188.3 129 66.7
Hma1.2p1_0592F.1_g185565 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 6.1e-46 187.6 129 68.2
Sopen03g031750 Solanum pennellii HOM05D005107 ORTHO05D006200 6.1e-46 187.6 129 68.2
AL8G40070 Arabidopsis lyrata HOM05D005107 ORTHO05D006200 8.0e-46 187.2 129 62.8
Solyc03g112670.3 Solanum lycopersicum HOM05D005107 ORTHO05D006200 8.0e-46 187.2 129 68.2
VMungo1215G1987 Vigna mungo HOM05D005107 ORTHO05D006200 8.0e-46 187.2 130 66.9
Sp2g26180 Schrenkiella parvula HOM05D005107 ORTHO05D006200 1.0e-45 186.8 129 64.3
Peaxi162Scf00089g01740 Petunia axillaris HOM05D005107 ORTHO05D006200 2.3e-45 185.7 129 67.4
A09p08000 Brassica napus HOM05D005107 ORTHO05D006200 3.1e-45 185.3 129 67.4
Carub.0008s2376 Capsella rubella HOM05D005107 ORTHO05D006200 3.1e-45 185.3 129 62.0
Lj4g0022030 Lotus japonicus HOM05D005107 ORTHO05D006200 4.0e-45 184.9 130 66.2
Nn2g12593 Nelumbo nucifera HOM05D005107 ORTHO05D006200 4.0e-45 184.9 129 67.4
ClCG01G013290 Citrullus lanatus HOM05D005107 ORTHO05D006200 5.2e-45 184.5 129 65.9
MSTRG.23144 Avicennia marina HOM05D005107 ORTHO05D006200 6.8e-45 184.1 129 64.3
Aa31LG11G620 Aethionema arabicum HOM05D005107 ORTHO05D006200 1.5e-44 183.0 129 62.8
Manes.06G107100 Manihot esculenta HOM05D005107 ORTHO05D006200 1.5e-44 183.0 129 67.4
AT5G63050 Arabidopsis thaliana HOM05D005107 ORTHO05D006200 2.6e-44 182.2 129 61.2
AUR62042560 Chenopodium quinoa HOM05D005107 ORTHO05D006200 2.6e-44 182.2 129 65.9
Thhalv10004512m.g Eutrema salsugineum HOM05D005107 ORTHO05D006200 3.4e-44 181.8 129 62.0
BraA09t36452Z Brassica rapa HOM05D005107 ORTHO05D006200 4.4e-44 181.4 129 65.9
CiPaw.12G028400 Carya illinoinensis HOM05D005107 ORTHO05D006200 4.4e-44 181.4 128 68.8
PSO832G2872 Papaver somniferum HOM05D005107 ORTHO05D006200 7.5e-44 180.6 129 63.6
Sabra15G0104000 Salix brachista HOM05D005107 ORTHO05D006200 7.5e-44 180.6 129 65.1
CAN.G1166.21 Capsicum annuum HOM05D005107 ORTHO05D006200 1.3e-43 179.9 129 65.1
Lj1g0017341 Lotus japonicus HOM05D005107 ORTHO05D006200 1.3e-43 179.9 129 64.3
VMungo1309G0437 Vigna mungo HOM05D005107 ORTHO05D006200 1.3e-43 179.9 129 65.9
PSO063G3062 Papaver somniferum HOM05D005107 ORTHO05D006200 1.7e-43 179.5 129 63.6
Glyma.04G185700 Glycine max HOM05D005107 ORTHO05D006200 2.2e-43 179.1 129 66.7
BcaB04g19949 Brassica carinata HOM05D005107 ORTHO05D006200 2.9e-43 178.7 129 63.6
Glyma.06G180400 Glycine max HOM05D005107 ORTHO05D006200 2.9e-43 178.7 129 66.7
Phvul.003G202200 Phaseolus vulgaris HOM05D005107 ORTHO05D006200 3.7e-43 178.3 130 63.1
C09p09050 Brassica napus HOM05D005107 ORTHO05D006200 4.9e-43 177.9 129 63.6
BolC9t53818H Brassica oleracea HOM05D005107 ORTHO05D006200 4.9e-43 177.9 129 63.6
BraA06t25929Z Brassica rapa HOM05D005107 ORTHO05D006200 6.4e-43 177.6 129 61.2
Ca_21938_v3 Cicer arietinum L. HOM05D005107 ORTHO05D006200 1.9e-42 176.0 130 62.3
TWI23G1004 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 1.9e-42 176.0 129 62.8
Manes.14G063800 Manihot esculenta HOM05D005107 ORTHO05D006200 2.4e-42 175.6 129 61.2
Phvul.009G176100 Phaseolus vulgaris HOM05D005107 ORTHO05D006200 2.4e-42 175.6 129 63.6
A06p29810 Brassica napus HOM05D005107 ORTHO05D006200 3.2e-42 175.3 129 61.2
CARHR276850 Cardamine hirsuta HOM05D005107 ORTHO05D006200 3.2e-42 175.3 129 58.9
MELO3C002281.2 Cucumis melo HOM05D005107 ORTHO05D006200 4.1e-42 174.9 129 64.3
Lalb_Chr08g0236621 Lupinus albus HOM05D005107 ORTHO05D006200 4.1e-42 174.9 129 63.6
EL10Ac2g03054 Beta vulgaris HOM05D005107 ORTHO05D006200 5.4e-42 174.5 129 65.1
Cc06_g17290 Coffea canephora HOM05D005107 ORTHO05D006200 5.4e-42 174.5 129 63.6
Sed0009116 Sechium edule HOM05D005107 ORTHO05D006200 5.4e-42 174.5 129 61.2
THA.LOC104821481 Tarenaya hassleriana HOM05D005107 ORTHO05D006200 1.2e-41 173.3 129 61.2
CDE05G1562 Ceratophyllum demersum HOM05D005107 ORTHO05D006200 1.6e-41 172.9 129 61.2
BolC3t18614H Brassica oleracea HOM05D005107 ORTHO05D006200 2.7e-41 172.2 129 60.5
CSS0014290 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 2.7e-41 172.2 129 63.6
arahy.Tifrunner.gnm1.ann1.5AH6W7 Arachis hypogaea HOM05D005107 ORTHO05D006200 3.5e-41 171.8 130 58.5
arahy.Tifrunner.gnm1.ann1.6379ZA Arachis hypogaea HOM05D005107 ORTHO05D006200 3.5e-41 171.8 130 58.5
C08p32660 Brassica napus HOM05D005107 ORTHO05D006200 4.6e-41 171.4 129 61.2
BolC8t50877H Brassica oleracea HOM05D005107 ORTHO05D006200 4.6e-41 171.4 129 61.2
Ah.10g031930 Amaranthus hybridus HOM05D005107 ORTHO05D006200 7.8e-41 170.6 129 63.6
TPR.G37531 Trifolium pratense HOM05D005107 ORTHO05D006200 1.0e-40 170.2 130 60.8
SalBow6G4644 Salvia bowleyana HOM05D005107 ORTHO05D006200 1.7e-40 169.5 129 62.0
CSS0028022 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 2.3e-40 169.1 129 62.0
HanXRQChr05g0154601 Helianthus annuus HOM05D005107 ORTHO05D006200 5.0e-40 167.9 129 62.8
ClCG06G017120 Citrullus lanatus HOM05D005107 ORTHO05D006200 8.6e-40 167.2 129 58.1
Ciclev10021009m.g Citrus clementina HOM05D005107 ORTHO05D006200 8.6e-40 167.2 129 64.3
Medtr4g105500 Medicago truncatula HOM05D005107 ORTHO05D006200 1.5e-39 166.4 130 58.5
THA.LOC104818212 Tarenaya hassleriana HOM05D005107 ORTHO05D006200 1.5e-39 166.4 129 58.1
TWI14G0467 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 1.9e-39 166.0 129 59.7
Peaxi162Scf00255g00912 Petunia axillaris HOM05D005107 ORTHO05D006200 7.3e-39 164.1 129 58.9
MELO3C026284.2 Cucumis melo HOM05D005107 ORTHO05D006200 4.7e-38 161.4 129 55.8
Aqoxy3G02846 Aquilegia oxysepala HOM05D005107 ORTHO05D006200 6.2e-38 161.0 129 60.5
Psat4g058600 Pisum sativum HOM05D005107 ORTHO05D006200 8.0e-38 160.6 130 55.4
Sed0010155 Sechium edule HOM05D005107 ORTHO05D006200 1.8e-37 159.5 129 60.5
HanXRQChr08g0235041 Helianthus annuus HOM05D005107 ORTHO05D006200 3.1e-37 158.7 129 58.1
Oeu024703.1 Olea europaea HOM05D005107 ORTHO05D006200 3.1e-37 158.7 129 58.1
ECA246G1934 Erigeron canadensis HOM05D005107 ORTHO05D006200 4.0e-37 158.3 128 59.4
FAN18G1595 Fragaria x ananassa HOM05D005107 ORTHO05D008464 5.2e-37 157.9 112 67.0
FAN13G2858 Fragaria x ananassa HOM05D005107 ORTHO05D008464 1.5e-36 156.4 112 67.9
unitig_26.g9615 Utricularia gibba HOM05D005107 ORTHO05D006200 1.3e-35 153.3 127 54.3
Ca_16156_v3 Cicer arietinum L. HOM05D005107 ORTHO05D006200 2.4e-34 149.1 129 52.7
Lsat_1_v5_gn_5_15301 Lactuca sativa HOM05D005107 ORTHO05D006200 2.4e-34 149.1 127 56.7
Medtr3g077490 Medicago truncatula HOM05D005107 ORTHO05D006200 3.2e-34 148.7 129 53.5
Migut.D01962 Erythranthe guttata HOM05D005107 ORTHO05D006200 9.2e-34 147.1 129 54.3
Psat5g115520 Pisum sativum HOM05D005107 ORTHO05D006200 2.7e-33 145.6 129 53.5
Lj5A126T86 Lonicera japonica HOM05D005107 ORTHO05D006200 4.6e-33 144.8 128 55.5
TPR.G14919 Trifolium pratense HOM05D005107 ORTHO05D006200 6.0e-33 144.4 128 50.8
BcaC01g02550 Brassica carinata HOM05D005107 ORTHO05D006200 1.3e-32 143.3 129 52.7
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 3.9e-32 141.7 128 57.0
Hund13172 Selenicereus undatus HOM05D005107 ORTHO05D006200 8.6e-32 140.6 123 53.7
TWI39G0316 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 1.9e-31 139.4 128 52.3
HPP92_001300 Vanilla planifolia HOM05D005107 ORTHO05D006200 3.3e-31 138.7 129 51.9
DCAR_016047 Daucus carota HOM05D005107 ORTHO05D006200 9.5e-31 137.1 129 48.8
Actinidia19110 Actinidia chinensis HOM05D005107 ORTHO05D006200 1.4e-29 133.3 115 56.5
C03p63570 Brassica napus HOM05D005107 ORTHO05D006200 2.0e-28 129.4 106 57.5
SGA_v2.0_scaffold90G27886 Striga asiatica HOM05D005107 ORTHO05D006200 2.6e-28 129.0 129 46.5
BcaC04g23368 Brassica carinata HOM05D005107 ORTHO05D006200 8.3e-27 124.0 95 61.1
CsaV3_1G008660 Cucumis sativus L. HOM05D005107 ORTHO05D006200 3.2e-26 122.1 129 50.4
ECA232G4933 Erigeron canadensis HOM05D005107 ORTHO05D006200 1.6e-22 109.8 129 44.2
ECA232G2224 Erigeron canadensis HOM05D005107 ORTHO05D006200 3.6e-22 108.6 129 43.4
Lsat_1_v5_gn_1_28200 Lactuca sativa HOM05D005107 ORTHO05D006200 1.4e-21 106.7 129 43.4
BcaB02g09719 Brassica carinata HOM05D005107 ORTHO05D006200 3.4e-20 102.1 129 43.4
HanXRQChr02g0035961 Helianthus annuus HOM05D005107 ORTHO05D006200 1.1e-18 97.1 122 42.6
Dinv38563 Davidia involucrata HOM05D003072 ORTHO05D008464 9.6e-15 84.0 64 62.5
Hma1.2p1_0522F.1_g171880 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 2.1e-06 56.2 39 61.5
SEGI_21940 Sequoiadendron giganteum HOM05D024261 ORTHO05D006200 4.8e-06 55.1 134 30.6


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