Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03126 Eucalyptus grandis HOM05D001396 ORTHO05D000493 6.2e-79 297.4 146 100.0
Eucgr.C03098 Eucalyptus grandis HOM05D001396 ORTHO05D000493 1.8e-46 189.5 170 62.4
Eucgr.C03091 Eucalyptus grandis HOM05D001396 ORTHO05D000493 2.5e-43 179.1 145 68.3
Eucgr.C03109 Eucalyptus grandis HOM05D001396 ORTHO05D000493 1.4e-30 136.7 94 75.5
ClCG02G018220 Citrullus lanatus HOM05D001396 ORTHO05D000493 2.5e-27 125.9 148 50.7
CsaV3_6G015600 Cucumis sativus L. HOM05D001396 ORTHO05D000493 1.6e-26 123.2 149 51.7
Haze_13435 Corylus avellana HOM05D001396 ORTHO05D000493 5.1e-25 118.2 152 47.4
COL.COLO4_04774 Corchorus olitorius HOM05D001396 ORTHO05D000493 3.3e-24 115.5 164 42.1
Sed0000946 Sechium edule HOM05D001396 ORTHO05D000493 9.7e-24 114.0 152 46.7
Hma1.2p1_0106F.1_g051000 Hydrangea macrophylla HOM05D021965 ORTHO05D000493 6.3e-23 111.3 150 43.3
COL.COLO4_36556 Corchorus olitorius HOM05D001396 ORTHO05D000493 4.1e-22 108.6 161 41.6
TAR624G0037 Trochodendron aralioides HOM05D001396 ORTHO05D000493 1.7e-20 103.2 151 44.4
Sed0009684 Sechium edule HOM05D001396 ORTHO05D000493 6.5e-20 101.3 165 42.4
COL.COLO4_33627 Corchorus olitorius HOM05D001396 ORTHO05D000493 2.3e-17 92.8 168 38.1
Hma1.2p1_0106F.1_g050960 Hydrangea macrophylla HOM05D021965 ORTHO05D000493 2.3e-17 92.8 126 42.1
Thecc.01G155300 Theobroma cacao HOM05D001396 ORTHO05D000493 3.9e-17 92.0 152 43.4
TAR624G1446 Trochodendron aralioides HOM05D001396 ORTHO05D000493 5.2e-17 91.7 144 41.0
Eucgr.A01780 Eucalyptus grandis HOM05D001396 ORTHO05D000493 7.4e-16 87.8 136 37.5
Nn4g26661 Nelumbo nucifera HOM05D001396 ORTHO05D000493 7.4e-16 87.8 142 38.0
TAR624G0688 Trochodendron aralioides HOM05D001396 ORTHO05D000493 1.3e-15 87.0 140 41.4
Dinv23709 Davidia involucrata HOM05D000051 ORTHO05D000493 1.7e-15 86.7 156 39.1
MELO3C000031.2 Cucumis melo HOM05D021965 ORTHO05D000493 1.8e-14 83.2 105 49.5
Rhsim06G0150800 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.8e-14 83.2 145 37.2
Hma1.2p1_0565F.1_g179460 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 4.1e-14 82.0 156 37.8
PGR042G3181 Punica granatum HOM05D001396 ORTHO05D000493 9.1e-14 80.9 136 34.6
Rhsim06G0150600 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.2e-13 80.5 145 35.2
Eucgr.A01849 Eucalyptus grandis HOM05D001396 ORTHO05D000493 2.6e-13 79.3 136 36.8
TAR624G0459 Trochodendron aralioides HOM05D001396 ORTHO05D000493 3.5e-13 79.0 142 38.0
Dinv23707 Davidia involucrata HOM05D001396 ORTHO05D000493 1.7e-12 76.6 171 35.1
Sopen07g028290 Solanum pennellii HOM05D001396 ORTHO05D000493 1.7e-12 76.6 141 32.6
Solyc07g054330.4 Solanum lycopersicum HOM05D001396 ORTHO05D000493 2.2e-12 76.3 141 32.6
CSS0005659 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 2.9e-12 75.9 145 36.6
Nitab4.5_0001090g0020 Nicotiana tabacum HOM05D001396 ORTHO05D000493 2.9e-12 75.9 157 31.8
PGSC0003DMG400018317 Solanum tuberosum HOM05D001396 ORTHO05D000493 3.8e-12 75.5 126 34.9
Peaxi162Scf00132g00721 Petunia axillaris HOM05D001396 ORTHO05D000493 5.0e-12 75.1 136 34.6
Rhsim06G0150700 Rhododendron simsii HOM05D001396 ORTHO05D000493 8.5e-12 74.3 173 31.8
CSS0035376 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.9e-11 73.2 145 36.6
Dinv18997 Davidia involucrata HOM05D001396 ORTHO05D000493 3.2e-11 72.4 159 31.4
Dinv40491 Davidia involucrata HOM05D001396 ORTHO05D000493 3.2e-11 72.4 143 34.3
GSVIVG01003199001 Vitis vinifera HOM05D001396 ORTHO05D000493 3.2e-11 72.4 140 39.3
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 4.2e-11 72.0 154 34.4
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 5.5e-11 71.6 107 41.1
Potri.001G322900 Populus trichocarpa HOM05D001396 ORTHO05D000493 5.5e-11 71.6 148 35.8
CAN.G248.54 Capsicum annuum HOM05D001396 ORTHO05D000493 7.2e-11 71.2 134 32.1
CSS0040115 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.2e-10 70.5 147 34.7
Nitab4.5_0001090g0080 Nicotiana tabacum HOM05D001396 ORTHO05D000493 2.1e-10 69.7 141 31.9
Dinv40489 Davidia involucrata HOM05D001396 ORTHO05D000493 2.7e-10 69.3 155 33.5
Nitab4.5_0005380g0030 Nicotiana tabacum HOM05D001396 ORTHO05D000493 4.7e-10 68.6 142 30.3
SGA_v2.0_scaffold305G47973 Striga asiatica HOM05D001396 ORTHO05D000493 1.8e-09 66.6 145 33.1
QL03p053101 Quercus lobata HOM05D001396 ORTHO05D000493 3.0e-09 65.9 153 30.7
QL05p081980 Quercus lobata HOM05D001396 ORTHO05D000493 3.0e-09 65.9 153 30.7
TAR624G0204 Trochodendron aralioides HOM05D001396 ORTHO05D000493 3.0e-09 65.9 137 37.2
Aqoxy7G01129 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 5.2e-09 65.1 134 37.3
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 6.7e-09 64.7 141 35.5
SGA_v2.0_scaffold305G47979 Striga asiatica HOM05D001396 ORTHO05D000493 2.0e-08 63.2 146 29.5
Nn5g27912 Nelumbo nucifera HOM05D005918 ORTHO05D008619 3.3e-08 62.4 161 32.3
Sopen07g028310 Solanum pennellii HOM05D001396 ORTHO05D000493 4.4e-08 62.0 102 40.2
Dinv40493 Davidia involucrata HOM05D001396 ORTHO05D000493 5.7e-08 61.6 146 33.6
Solyc07g054370.3 Solanum lycopersicum HOM05D001396 ORTHO05D000493 5.7e-08 61.6 102 39.2
CSS0017467 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 9.7e-08 60.8 101 38.6
CAN.G248.55 Capsicum annuum HOM05D001396 ORTHO05D000493 9.7e-08 60.8 136 31.6
QL04p018567 Quercus lobata HOM05D001396 ORTHO05D000493 1.3e-07 60.5 154 29.9
Sabra16G0204800 Salix brachista HOM05D001396 ORTHO05D000493 1.3e-07 60.5 160 32.5
vmacro03815 Vaccinium macrocarpon HOM05D001396 ORTHO05D000493 1.3e-07 60.5 139 36.7
CDE05G1832 Ceratophyllum demersum HOM05D000051 ORTHO05D000493 2.2e-07 59.7 159 30.8
TAR629G2966 Trochodendron aralioides HOM05D017481 ORTHO05D011342 2.8e-07 59.3 77 44.2
Aqoxy7G01133 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 3.7e-07 58.9 126 35.7
Dinv39821 Davidia involucrata HOM05D001396 ORTHO05D000493 3.7e-07 58.9 106 37.7
QL04p018599 Quercus lobata HOM05D001396 ORTHO05D000493 3.7e-07 58.9 155 30.3
Oeu029444.1 Olea europaea HOM05D005918 ORTHO05D008619 4.8e-07 58.5 149 26.8
Psat6g076920 Pisum sativum HOM05D003087 ORTHO05D003312 4.8e-07 58.5 121 32.2
QL04p018347 Quercus lobata HOM05D001396 ORTHO05D000493 4.8e-07 58.5 114 36.8
QL05p072819 Quercus lobata HOM05D001396 ORTHO05D000493 4.8e-07 58.5 126 29.4
Hma1.2p1_0144F.1_g064650 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 6.3e-07 58.2 144 34.7
CSS0005570 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.1e-06 57.4 99 38.4
HPP92_016317 Vanilla planifolia HOM05D000051 ORTHO05D000493 1.8e-06 56.6 113 35.4
HPP92_016299 Vanilla planifolia HOM05D005918 ORTHO05D008619 2.4e-06 56.2 95 38.9
Lj2A948G37 Lonicera japonica HOM05D000051 ORTHO05D000015 4.1e-06 55.5 95 35.8
Cc05_g05630 Coffea canephora HOM05D005918 ORTHO05D008619 9.1e-06 54.3 149 26.8
COL.COLO4_33625 Corchorus olitorius HOM05D001396 ORTHO05D000493 9.1e-06 54.3 84 41.7
QL04p018553 Quercus lobata HOM05D001396 ORTHO05D000493 9.1e-06 54.3 159 28.3


User provided reference genes

Program Settings