Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03098 Eucalyptus grandis HOM05D001396 ORTHO05D000493 9.6e-89 330.1 163 100.0
Eucgr.C03126 Eucalyptus grandis HOM05D001396 ORTHO05D000493 1.2e-46 190.3 170 62.4
Eucgr.C03109 Eucalyptus grandis HOM05D001396 ORTHO05D000493 7.0e-39 164.5 114 75.4
Eucgr.C03091 Eucalyptus grandis HOM05D001396 ORTHO05D000493 5.5e-36 154.8 162 55.6
ClCG02G018220 Citrullus lanatus HOM05D001396 ORTHO05D000493 5.0e-29 131.7 147 50.3
Haze_13435 Corylus avellana HOM05D001396 ORTHO05D000493 5.0e-29 131.7 151 51.0
CsaV3_6G015600 Cucumis sativus L. HOM05D001396 ORTHO05D000493 3.6e-27 125.6 148 50.7
Hma1.2p1_0106F.1_g051000 Hydrangea macrophylla HOM05D021965 ORTHO05D000493 1.7e-24 116.7 153 44.4
Sed0000946 Sechium edule HOM05D001396 ORTHO05D000493 2.2e-24 116.3 149 46.3
Sed0009684 Sechium edule HOM05D001396 ORTHO05D000493 2.8e-24 115.9 165 43.0
COL.COLO4_04774 Corchorus olitorius HOM05D001396 ORTHO05D000493 4.9e-24 115.2 164 40.9
COL.COLO4_36556 Corchorus olitorius HOM05D001396 ORTHO05D000493 9.2e-23 110.9 169 40.2
COL.COLO4_33627 Corchorus olitorius HOM05D001396 ORTHO05D000493 5.0e-21 105.1 166 38.6
Hma1.2p1_0106F.1_g050960 Hydrangea macrophylla HOM05D021965 ORTHO05D000493 1.5e-20 103.6 132 44.7
TAR624G0037 Trochodendron aralioides HOM05D001396 ORTHO05D000493 2.1e-19 99.8 147 42.9
MELO3C000031.2 Cucumis melo HOM05D021965 ORTHO05D000493 8.9e-18 94.4 103 51.5
TAR624G1446 Trochodendron aralioides HOM05D001396 ORTHO05D000493 2.6e-17 92.8 146 41.1
TAR624G0459 Trochodendron aralioides HOM05D001396 ORTHO05D000493 4.4e-17 92.0 141 40.4
Thecc.01G155300 Theobroma cacao HOM05D001396 ORTHO05D000493 7.5e-17 91.3 151 42.4
Nn4g26661 Nelumbo nucifera HOM05D001396 ORTHO05D000493 6.4e-16 88.2 143 39.9
TAR624G0688 Trochodendron aralioides HOM05D001396 ORTHO05D000493 6.4e-16 88.2 138 41.3
Dinv40491 Davidia involucrata HOM05D001396 ORTHO05D000493 2.0e-14 83.2 168 35.7
Dinv23709 Davidia involucrata HOM05D000051 ORTHO05D000493 1.7e-13 80.1 163 36.8
Peaxi162Scf00132g00721 Petunia axillaris HOM05D001396 ORTHO05D000493 2.3e-13 79.7 163 30.7
Rhsim06G0150600 Rhododendron simsii HOM05D001396 ORTHO05D000493 3.9e-13 79.0 146 32.2
TAR624G0204 Trochodendron aralioides HOM05D001396 ORTHO05D000493 3.3e-12 75.9 143 39.2
Hma1.2p1_0565F.1_g179460 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 5.6e-12 75.1 163 35.6
Dinv23707 Davidia involucrata HOM05D001396 ORTHO05D000493 2.8e-11 72.8 161 34.8
Rhsim06G0150800 Rhododendron simsii HOM05D001396 ORTHO05D000493 2.8e-11 72.8 146 31.5
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 6.2e-11 71.6 162 35.8
SGA_v2.0_scaffold305G47973 Striga asiatica HOM05D001396 ORTHO05D000493 6.2e-11 71.6 159 30.8
Eucgr.A01780 Eucalyptus grandis HOM05D001396 ORTHO05D000493 1.1e-10 70.9 146 32.9
PGR042G3181 Punica granatum HOM05D001396 ORTHO05D000493 3.1e-10 69.3 146 30.8
Rhsim06G0150700 Rhododendron simsii HOM05D001396 ORTHO05D000493 8.9e-10 67.8 162 30.2
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 1.5e-09 67.0 110 40.0
COL.COLO4_33625 Corchorus olitorius HOM05D001396 ORTHO05D000493 2.6e-09 66.2 91 41.8
Potri.001G322900 Populus trichocarpa HOM05D001396 ORTHO05D000493 2.6e-09 66.2 153 35.3
Nn5g27912 Nelumbo nucifera HOM05D005918 ORTHO05D008619 3.4e-09 65.9 135 36.3
GSVIVG01003199001 Vitis vinifera HOM05D001396 ORTHO05D000493 3.4e-09 65.9 159 35.2
CAN.G248.54 Capsicum annuum HOM05D001396 ORTHO05D000493 4.4e-09 65.5 167 28.1
Aqoxy7G01129 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 1.7e-08 63.5 144 36.8
Eucgr.A01849 Eucalyptus grandis HOM05D001396 ORTHO05D000493 4.9e-08 62.0 146 31.5
Hma1.2p1_0144F.1_g064650 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 4.9e-08 62.0 153 35.9
Dinv40489 Davidia involucrata HOM05D001396 ORTHO05D000493 8.3e-08 61.2 149 34.9
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 4.1e-07 58.9 144 36.1
QL03p053101 Quercus lobata HOM05D001396 ORTHO05D000493 4.1e-07 58.9 150 31.3
QL05p081980 Quercus lobata HOM05D001396 ORTHO05D000493 4.1e-07 58.9 150 31.3
CSS0005570 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 7.1e-07 58.2 94 39.4
HPP92_016299 Vanilla planifolia HOM05D005918 ORTHO05D008619 7.1e-07 58.2 171 28.1
CAN.G248.55 Capsicum annuum HOM05D001396 ORTHO05D000493 9.2e-07 57.8 159 27.7
Nitab4.5_0000190g0130 Nicotiana tabacum HOM05D001396 ORTHO05D000493 9.2e-07 57.8 164 31.1
HPP92_016317 Vanilla planifolia HOM05D000051 ORTHO05D000493 9.2e-07 57.8 171 28.1
Dinv40493 Davidia involucrata HOM05D001396 ORTHO05D000493 1.6e-06 57.0 164 30.5
Nitab4.5_0003574g0060 Nicotiana tabacum HOM05D001396 ORTHO05D000493 2.7e-06 56.2 163 30.7
Aqoxy7G01133 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 3.5e-06 55.8 93 40.9
Dinv39821 Davidia involucrata HOM05D001396 ORTHO05D000493 3.5e-06 55.8 103 38.8
Hma1.2p1_2867F.1_g329620 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 4.6e-06 55.5 149 36.2
Psat6g076920 Pisum sativum HOM05D003087 ORTHO05D003312 4.6e-06 55.5 99 28.3


User provided reference genes

Program Settings