Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03091 Eucalyptus grandis HOM05D001396 ORTHO05D000493 4.3e-83 311.2 152 100.0
Eucgr.C03126 Eucalyptus grandis HOM05D001396 ORTHO05D000493 5.7e-43 177.9 145 68.3
Eucgr.C03098 Eucalyptus grandis HOM05D001396 ORTHO05D000493 1.5e-35 153.3 162 55.6
Haze_13435 Corylus avellana HOM05D001396 ORTHO05D000493 4.8e-34 148.3 181 47.5
COL.COLO4_04774 Corchorus olitorius HOM05D001396 ORTHO05D000493 8.5e-31 137.5 177 43.5
ClCG02G018220 Citrullus lanatus HOM05D001396 ORTHO05D000493 1.2e-29 133.7 176 44.9
Eucgr.C03109 Eucalyptus grandis HOM05D001396 ORTHO05D000493 6.1e-29 131.3 85 80.0
CsaV3_6G015600 Cucumis sativus L. HOM05D001396 ORTHO05D000493 1.4e-28 130.2 177 45.2
COL.COLO4_36556 Corchorus olitorius HOM05D001396 ORTHO05D000493 5.7e-27 124.8 179 42.5
TAR624G0037 Trochodendron aralioides HOM05D001396 ORTHO05D000493 1.1e-25 120.6 174 46.0
Hma1.2p1_0106F.1_g051000 Hydrangea macrophylla HOM05D021965 ORTHO05D000493 7.0e-25 117.9 177 41.2
Eucgr.A01780 Eucalyptus grandis HOM05D001396 ORTHO05D000493 2.2e-23 112.8 159 39.6
Sed0000946 Sechium edule HOM05D001396 ORTHO05D000493 5.0e-23 111.7 178 41.0
Sed0009684 Sechium edule HOM05D001396 ORTHO05D000493 4.2e-22 108.6 163 44.2
Dinv23709 Davidia involucrata HOM05D000051 ORTHO05D000493 8.0e-21 104.4 184 39.1
Nn4g26661 Nelumbo nucifera HOM05D001396 ORTHO05D000493 2.3e-20 102.8 162 40.1
Rhsim06G0150800 Rhododendron simsii HOM05D001396 ORTHO05D000493 3.0e-20 102.4 163 38.7
Dinv23707 Davidia involucrata HOM05D001396 ORTHO05D000493 5.2e-20 101.7 178 38.2
COL.COLO4_33627 Corchorus olitorius HOM05D001396 ORTHO05D000493 1.5e-19 100.1 181 37.6
Eucgr.A01849 Eucalyptus grandis HOM05D001396 ORTHO05D000493 2.6e-19 99.4 158 38.0
Hma1.2p1_0565F.1_g179460 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 2.6e-19 99.4 183 37.7
Nitab4.5_0001090g0020 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.7e-18 96.7 163 35.6
CAN.G248.54 Capsicum annuum HOM05D001396 ORTHO05D000493 2.2e-18 96.3 165 35.2
TAR624G1446 Trochodendron aralioides HOM05D001396 ORTHO05D000493 3.7e-18 95.5 165 40.0
Rhsim06G0150600 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.8e-17 93.2 163 34.4
Thecc.01G155300 Theobroma cacao HOM05D001396 ORTHO05D000493 1.8e-17 93.2 167 40.7
PGR042G3181 Punica granatum HOM05D001396 ORTHO05D000493 2.4e-17 92.8 165 33.3
Peaxi162Scf00132g00721 Petunia axillaris HOM05D001396 ORTHO05D000493 3.1e-17 92.4 163 35.0
Nitab4.5_0001090g0080 Nicotiana tabacum HOM05D001396 ORTHO05D000493 4.1e-17 92.0 163 34.4
TAR624G0459 Trochodendron aralioides HOM05D001396 ORTHO05D000493 1.6e-16 90.1 163 37.4
SGA_v2.0_scaffold305G47973 Striga asiatica HOM05D001396 ORTHO05D000493 4.5e-16 88.6 155 36.8
CAN.G248.55 Capsicum annuum HOM05D001396 ORTHO05D000493 1.0e-15 87.4 149 34.2
Dinv15484 Davidia involucrata HOM05D001396 ORTHO05D000493 1.7e-15 86.7 57 66.7
Rhsim06G0150700 Rhododendron simsii HOM05D001396 ORTHO05D000493 2.9e-15 85.9 191 31.4
TAR624G0688 Trochodendron aralioides HOM05D001396 ORTHO05D000493 6.6e-15 84.7 152 39.5
PGSC0003DMG400018317 Solanum tuberosum HOM05D001396 ORTHO05D000493 8.6e-15 84.3 161 32.9
GSVIVG01003199001 Vitis vinifera HOM05D001396 ORTHO05D000493 8.6e-15 84.3 170 36.5
Nitab4.5_0005380g0030 Nicotiana tabacum HOM05D001396 ORTHO05D000493 3.3e-14 82.4 157 33.1
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 7.3e-14 81.3 177 33.9
Hma1.2p1_0106F.1_g050960 Hydrangea macrophylla HOM05D021965 ORTHO05D000493 9.5e-14 80.9 100 49.0
Sopen07g028290 Solanum pennellii HOM05D001396 ORTHO05D000493 2.1e-13 79.7 160 31.2
Solyc07g054330.4 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.4e-12 77.0 160 30.6
SGA_v2.0_scaffold305G47979 Striga asiatica HOM05D001396 ORTHO05D000493 5.2e-12 75.1 164 32.3
MELO3C000031.2 Cucumis melo HOM05D021965 ORTHO05D000493 6.8e-12 74.7 97 49.5
TAR624G0204 Trochodendron aralioides HOM05D001396 ORTHO05D000493 6.8e-12 74.7 157 40.8
QL03p053101 Quercus lobata HOM05D001396 ORTHO05D000493 8.9e-12 74.3 183 30.6
QL05p081980 Quercus lobata HOM05D001396 ORTHO05D000493 8.9e-12 74.3 183 30.6
Potri.001G322900 Populus trichocarpa HOM05D001396 ORTHO05D000493 2.6e-11 72.8 176 31.2
Sopen07g028310 Solanum pennellii HOM05D001396 ORTHO05D000493 3.4e-11 72.4 129 34.9
Solyc07g054370.3 Solanum lycopersicum HOM05D001396 ORTHO05D000493 4.4e-11 72.0 129 34.1
SGA_v2.0_scaffold305G47974 Striga asiatica HOM05D001396 ORTHO05D000493 4.4e-11 72.0 159 33.3
Dinv40491 Davidia involucrata HOM05D001396 ORTHO05D000493 1.3e-10 70.5 170 31.8
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 1.3e-10 70.5 137 36.5
Nitab4.5_0003574g0060 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.7e-10 70.1 161 32.9
Nitab4.5_0003574g0030 Nicotiana tabacum HOM05D001396 ORTHO05D000493 2.9e-10 69.3 156 32.1
Dinv39826 Davidia involucrata HOM05D001396 ORTHO05D000493 3.7e-10 68.9 148 35.1
QL05p072819 Quercus lobata HOM05D001396 ORTHO05D000493 3.7e-10 68.9 177 31.6
Rhsim13G0172800 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.1e-09 67.4 163 33.7
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 1.8e-09 66.6 166 34.9
Nitab4.5_0000190g0140 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.8e-09 66.6 154 32.5
Dinv18997 Davidia involucrata HOM05D001396 ORTHO05D000493 2.4e-09 66.2 176 29.5
Dinv40493 Davidia involucrata HOM05D001396 ORTHO05D000493 2.4e-09 66.2 158 34.8
QL04p018553 Quercus lobata HOM05D001396 ORTHO05D000493 2.4e-09 66.2 184 30.4
Dinv39823 Davidia involucrata HOM05D001396 ORTHO05D000493 3.2e-09 65.9 150 32.0
Nitab4.5_0000190g0130 Nicotiana tabacum HOM05D001396 ORTHO05D000493 4.1e-09 65.5 160 33.1
QL04p018599 Quercus lobata HOM05D001396 ORTHO05D000493 4.1e-09 65.5 165 32.1
QL04p018567 Quercus lobata HOM05D001396 ORTHO05D000493 5.4e-09 65.1 165 32.7
Dinv18995 Davidia involucrata HOM05D001396 ORTHO05D000493 7.0e-09 64.7 148 35.8
Eucgr.K01152 Eucalyptus grandis HOM05D000051 ORTHO05D000493 1.2e-08 63.9 61 50.8
Aqoxy7G01133 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 1.6e-08 63.5 157 32.5
CAN.G1834.6 Capsicum annuum HOM05D001396 ORTHO05D000493 1.6e-08 63.5 163 32.5
Rhsim06G0151100 Rhododendron simsii HOM05D001396 ORTHO05D000493 2.0e-08 63.2 55 49.1
Sabra16G0204800 Salix brachista HOM05D001396 ORTHO05D000493 2.7e-08 62.8 188 28.7
Solyc08g005320.3 Solanum lycopersicum HOM05D001396 ORTHO05D000493 3.5e-08 62.4 154 31.2
Aqoxy7G01129 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 4.6e-08 62.0 163 36.2
Dinv18998 Davidia involucrata HOM05D001396 ORTHO05D000493 4.6e-08 62.0 148 31.8
Dinv40489 Davidia involucrata HOM05D001396 ORTHO05D000493 4.6e-08 62.0 188 30.3
EL10Ac6g13713 Beta vulgaris HOM05D024594 ORTHO05D023822 7.8e-08 61.2 127 36.2
COL.COLO4_33625 Corchorus olitorius HOM05D001396 ORTHO05D000493 7.8e-08 61.2 88 43.2
Dinv18996 Davidia involucrata HOM05D001396 ORTHO05D000493 7.8e-08 61.2 145 35.2
QL04p018347 Quercus lobata HOM05D001396 ORTHO05D000493 1.3e-07 60.5 134 34.3
Peaxi162Scf00588g01218 Petunia axillaris HOM05D001396 ORTHO05D000493 2.3e-07 59.7 148 33.1
Sopen12g025910 Solanum pennellii HOM05D001396 ORTHO05D000493 3.0e-07 59.3 142 31.0
CAN.G1181.31 Capsicum annuum HOM05D001396 ORTHO05D000493 5.0e-07 58.5 170 28.8
vmacro03815 Vaccinium macrocarpon HOM05D001396 ORTHO05D000493 6.6e-07 58.2 192 31.8
CSS0005570 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.1e-06 57.4 129 34.1
CSS0035376 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.5e-06 57.0 136 33.8
Dinv39819 Davidia involucrata HOM05D001396 ORTHO05D000493 1.9e-06 56.6 120 40.0
Hma1.2p1_0144F.1_g064650 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 3.3e-06 55.8 167 34.1
Nn5g27912 Nelumbo nucifera HOM05D005918 ORTHO05D008619 3.3e-06 55.8 168 31.5
vmacro03814 Vaccinium macrocarpon HOM05D001396 ORTHO05D000493 3.3e-06 55.8 165 33.3
COL.COLO4_33628 Corchorus olitorius HOM05D030164 ORTHO05D000493 9.5e-06 54.3 94 40.4


User provided reference genes

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