Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 5.2e-72 274.2 136 100.0
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 6.4e-38 161.0 139 65.5
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 7.9e-28 127.5 116 56.0
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.3e-27 126.7 137 51.1
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 1.8e-27 126.3 137 51.1
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.8e-27 126.3 137 51.1
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 3.9e-27 125.2 137 49.6
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.1e-26 123.6 130 53.1
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 5.7e-26 121.3 130 51.5
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 9.7e-26 120.6 136 49.3
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 2.8e-25 119.0 118 52.5
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 3.7e-25 118.6 110 54.5
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 4.8e-25 118.2 125 52.0
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.8e-24 116.3 116 52.6
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 1.8e-24 116.3 127 50.4
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 2.4e-24 115.9 117 50.4
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 4.1e-24 115.2 127 49.6
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 6.9e-24 114.4 146 47.9
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 9.0e-24 114.0 118 49.2
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 1.2e-23 113.6 125 48.8
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 1.5e-23 113.2 112 53.6
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 2.0e-23 112.8 112 53.6
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 2.6e-23 112.5 128 47.7
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 3.4e-23 112.1 126 48.4
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 4.5e-23 111.7 109 52.3
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 4.5e-23 111.7 109 52.3
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 4.5e-23 111.7 117 51.3
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 4.5e-23 111.7 117 48.7
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 5.9e-23 111.3 117 49.6
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 5.9e-23 111.3 118 50.0
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 5.9e-23 111.3 117 49.6
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 7.6e-23 110.9 103 53.4
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 7.6e-23 110.9 120 48.3
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.7e-22 109.8 133 49.6
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 1.7e-22 109.8 132 47.7
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 1.7e-22 109.8 118 50.8
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.7e-22 109.8 109 51.4
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 1.7e-22 109.8 128 45.3
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 1.7e-22 109.8 128 47.7
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 1.7e-22 109.8 128 47.7
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 1.7e-22 109.8 126 47.6
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 2.2e-22 109.4 117 48.7
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 2.2e-22 109.4 114 50.0
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 2.2e-22 109.4 102 53.9
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 3.8e-22 108.6 116 48.3
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 3.8e-22 108.6 116 48.3
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 5.0e-22 108.2 125 46.4
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 5.0e-22 108.2 133 48.9
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 5.0e-22 108.2 117 51.3
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 5.0e-22 108.2 117 50.4
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 6.5e-22 107.8 126 47.6
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 8.5e-22 107.5 66 75.8
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 8.5e-22 107.5 52 88.5
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 1.1e-21 107.1 61 77.0
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 1.1e-21 107.1 129 46.5
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 1.1e-21 107.1 61 73.8
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 1.4e-21 106.7 61 77.0
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 1.4e-21 106.7 61 77.0
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.4e-21 106.7 117 50.4
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 1.9e-21 106.3 61 77.0
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.9e-21 106.3 61 77.0
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 1.9e-21 106.3 61 77.0
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 1.9e-21 106.3 117 48.7
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 1.9e-21 106.3 117 48.7
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 1.9e-21 106.3 114 50.0
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 3.2e-21 105.5 72 70.8
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 4.2e-21 105.1 112 49.1
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 5.5e-21 104.8 117 46.2
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 7.2e-21 104.4 117 48.7
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 2.7e-20 102.4 114 48.2
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 3.6e-20 102.1 61 75.4
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 3.6e-20 102.1 64 75.0
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 3.6e-20 102.1 64 75.0
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 3.6e-20 102.1 61 77.0
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 3.6e-20 102.1 61 77.0
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 3.6e-20 102.1 61 72.1
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 6.1e-20 101.3 61 75.4
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 6.1e-20 101.3 61 75.4
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 1.4e-19 100.1 115 47.8
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 3.0e-19 99.0 99 50.5
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 6.7e-19 97.8 61 72.1
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.9e-18 96.3 56 75.0
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 2.5e-18 95.9 122 44.3
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 2.5e-18 95.9 114 46.5
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 3.3e-18 95.5 101 47.5
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 4.3e-18 95.1 124 41.1
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 5.7e-18 94.7 62 67.7
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 9.7e-18 94.0 113 46.9
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 1.7e-17 93.2 59 69.5
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 4.8e-17 91.7 117 46.2
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 6.3e-17 91.3 61 63.9
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 9.1e-16 87.4 112 42.0
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 2.2e-14 82.8 41 75.6
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 2.2e-14 82.8 50 68.0
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 3.8e-14 82.0 60 56.7
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 8.5e-14 80.9 145 38.6
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 4.2e-13 78.6 79 48.1
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 5.5e-13 78.2 46 71.7
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 5.5e-13 78.2 46 71.7
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 1.6e-12 76.6 42 66.7
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 6.1e-12 74.7 44 70.5
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 9.7e-10 67.4 100 40.0
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 9.7e-10 67.4 82 43.9
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 9.7e-10 67.4 42 71.4
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 2.2e-09 66.2 82 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 1.8e-08 63.2 42 54.8
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.8e-08 63.2 81 43.2
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 2.4e-08 62.8 52 51.9
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 2.0e-07 59.7 30 83.3
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 4.5e-07 58.5 30 83.3


User provided reference genes

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