Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 5.6e-164 580.9 294 100.0
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 1.9e-127 459.5 294 78.6
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.2e-126 456.8 297 78.1
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 8.0e-126 454.1 297 78.1
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 6.7e-125 451.1 297 77.4
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 6.7e-125 451.1 295 77.3
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 5.3e-122 441.4 293 78.2
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 7.0e-122 441.0 295 74.9
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 7.0e-122 441.0 295 74.9
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 7.0e-122 441.0 297 74.4
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.5e-121 438.3 297 74.7
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 4.5e-121 438.3 295 74.6
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 7.7e-121 437.6 297 74.7
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 2.9e-120 435.6 286 74.5
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.0e-120 434.9 297 74.4
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 8.5e-120 434.1 297 73.7
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.1e-119 433.7 297 75.4
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 4.2e-119 431.8 297 74.4
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 5.5e-119 431.4 293 76.1
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 2.1e-118 429.5 293 75.8
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 2.7e-118 429.1 295 73.2
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 2.7e-118 429.1 289 74.0
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 4.7e-118 428.3 293 77.1
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 8.0e-118 427.6 288 74.3
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 8.8e-117 424.1 293 76.1
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 5.7e-116 421.4 296 73.0
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.7e-116 421.4 283 73.9
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 2.8e-115 419.1 292 73.6
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 4.8e-115 418.3 295 70.8
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 4.8e-115 418.3 319 68.7
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 4.8e-115 418.3 296 72.6
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 6.3e-115 417.9 282 75.9
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 6.3e-115 417.9 293 73.0
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 6.3e-115 417.9 293 73.0
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 8.3e-115 417.5 295 71.2
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.1e-114 417.2 293 72.0
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 1.1e-114 417.2 293 75.1
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.1e-114 417.2 277 75.5
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.4e-114 416.8 296 71.3
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 2.4e-114 416.0 293 72.0
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 2.4e-114 416.0 277 74.7
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.4e-114 416.0 306 68.6
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.4e-114 416.0 294 72.4
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 4.1e-114 415.2 296 71.6
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.6e-113 413.3 297 71.7
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 2.0e-113 412.9 279 73.5
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 2.7e-113 412.5 281 74.0
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 3.5e-113 412.1 312 67.0
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 4.5e-113 411.8 296 71.6
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 4.5e-113 411.8 293 71.7
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.0e-112 410.6 282 74.8
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.0e-112 410.6 294 70.7
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.3e-112 410.2 295 70.8
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.7e-112 409.8 306 68.0
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 2.9e-112 409.1 295 70.5
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 5.0e-112 408.3 305 68.5
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 8.5e-112 407.5 295 69.2
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 8.5e-112 407.5 281 73.0
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 1.1e-111 407.1 299 69.6
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 1.1e-111 407.1 293 71.0
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 2.5e-111 406.0 307 67.4
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 3.2e-111 405.6 302 68.5
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 4.2e-111 405.2 310 66.1
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.5e-111 404.8 294 70.1
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.2e-110 403.7 293 70.6
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 1.6e-110 403.3 306 68.3
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 2.7e-110 402.5 284 73.6
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 3.6e-110 402.1 299 68.9
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 3.6e-110 402.1 298 68.8
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 1.8e-109 399.8 303 66.7
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.3e-109 399.4 281 71.2
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 3.0e-109 399.1 296 70.6
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.2e-108 397.1 310 66.1
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.2e-108 397.1 279 72.4
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 2.0e-108 396.4 279 72.8
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 4.4e-108 395.2 276 71.7
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 4.4e-108 395.2 297 68.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 5.7e-108 394.8 302 67.5
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 5.7e-108 394.8 295 69.8
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 7.5e-108 394.4 280 70.7
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 1.7e-107 393.3 448 51.6
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 2.2e-107 392.9 279 71.7
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.2e-107 392.9 294 69.4
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 2.2e-107 392.9 294 69.7
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 1.4e-106 390.2 294 67.0
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 1.8e-106 389.8 373 56.8
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.8e-106 389.8 278 71.6
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 5.4e-106 388.3 294 68.0
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 6.6e-104 381.3 294 65.6
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.5e-103 380.2 304 63.2
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 5.6e-103 378.3 299 68.2
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 2.3e-101 372.9 282 66.7
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 3.0e-101 372.5 294 65.3
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.7e-99 366.7 276 65.9
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 2.2e-99 366.3 272 68.8
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 2.4e-98 362.8 284 66.5
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 5.4e-98 361.7 287 65.9
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.3e-96 357.1 254 70.9
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 2.8e-94 349.4 283 66.8
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 6.2e-94 348.2 267 67.0
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 4.0e-93 345.5 246 71.5
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.0e-93 345.5 294 60.9
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.2e-92 344.0 294 60.9
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 4.4e-92 342.0 290 65.2
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 5.4e-90 335.1 257 68.5
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 4.7e-86 322.0 198 79.8
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 1.4e-85 320.5 292 56.8
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 5.2e-85 318.5 211 77.3
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 7.5e-84 314.7 205 76.6
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.6e-81 307.0 294 55.4
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 6.8e-77 291.6 277 58.8
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.2e-76 290.8 259 58.7
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.8e-75 285.8 294 54.4
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.2e-74 281.2 294 54.1
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 2.8e-70 269.6 274 52.2
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 3.6e-70 269.2 279 50.9
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 3.1e-69 266.2 253 61.3
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 5.8e-68 261.9 273 51.3
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 7.1e-66 255.0 268 48.9
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 9.3e-66 254.6 165 73.9
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 6.0e-65 251.9 275 50.2
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-61 240.7 169 72.2
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 1.3e-59 234.2 278 47.8
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.9e-59 233.0 275 47.3
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 4.9e-59 232.3 166 75.3
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-58 230.7 169 69.8
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 3.2e-58 229.6 265 54.7
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 2.3e-56 223.4 218 60.6
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.1e-38 163.7 117 67.5
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 2.9e-35 153.3 134 60.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.3e-32 144.4 138 58.7
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 4.5e-20 102.8 130 46.9
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 1.6e-17 94.4 240 37.9
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.0e-16 91.7 97 50.5
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 1.1e-10 71.6 177 37.3


User provided reference genes

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