Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.4e-221 771.9 401 100.0
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.3e-167 592.0 335 94.0
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.5e-147 524.6 401 74.6
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.2e-100 370.9 276 77.9
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.0e-99 367.9 211 93.8
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 8.5e-70 268.5 366 47.3
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 3.3e-66 256.5 353 43.9
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 2.6e-63 246.9 344 44.2
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 2.2e-62 243.8 321 44.2
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 3.8e-62 243.0 231 60.2
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 3.6e-60 236.5 286 49.0
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 3.9e-59 233.0 355 40.6
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 2.6e-58 230.3 344 43.6
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 3.7e-57 226.5 323 45.2
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 6.3e-57 225.7 351 41.3
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.8e-56 224.2 354 40.1
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 4.1e-56 223.0 219 56.6
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 4.5e-55 219.5 350 39.7
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 2.2e-54 217.2 278 46.8
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 5.5e-53 212.6 282 45.0
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 9.4e-53 211.8 219 55.3
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.0e-51 208.4 207 56.0
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 3.9e-51 206.5 207 55.1
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 2.0e-50 204.1 164 67.1
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 3.3e-50 203.4 207 54.6
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 7.4e-50 202.2 231 50.6
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 4.8e-49 199.5 348 37.6
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 6.3e-49 199.1 217 55.3
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 2.4e-48 197.2 221 54.3
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 1.2e-47 194.9 198 56.6
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 7.7e-47 192.2 370 36.8
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 1.0e-46 191.8 224 50.9
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 3.8e-46 189.9 206 54.4
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 6.5e-46 189.1 204 53.4
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 1.1e-45 188.3 265 44.5
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 2.5e-45 187.2 194 56.2
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.5e-45 187.2 211 52.6
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 3.2e-45 186.8 217 49.8
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.2e-45 186.4 211 52.1
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.2e-45 186.4 211 52.1
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 5.5e-45 186.0 219 51.1
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 5.5e-45 186.0 207 54.6
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 7.2e-45 185.7 231 48.1
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 9.4e-45 185.3 198 54.0
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 1.2e-44 184.9 168 62.5
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.6e-44 184.5 203 52.7
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 2.1e-44 184.1 193 54.9
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 2.7e-44 183.7 210 51.9
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.6e-44 183.3 211 51.7
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 1.4e-43 181.4 203 51.7
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 1.8e-43 181.0 233 48.1
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 2.3e-43 180.6 204 51.5
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 1.2e-42 178.3 146 67.8
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 1.2e-42 178.3 211 51.2
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 1.5e-42 177.9 224 48.7
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.0e-42 177.6 205 52.2
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 2.6e-42 177.2 204 52.9
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 2.6e-42 177.2 207 51.2
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 3.3e-42 176.8 204 52.5
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 3.3e-42 176.8 204 52.5
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 7.5e-42 175.6 204 52.5
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 6.3e-41 172.6 348 34.5
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 1.1e-40 171.8 161 61.5
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.1e-40 171.8 202 50.0
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 5.3e-40 169.5 232 47.8
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 2.7e-39 167.2 195 49.7
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 7.7e-39 165.6 195 51.3
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 1.0e-38 165.2 232 44.0
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 2.2e-38 164.1 203 48.8
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 2.2e-38 164.1 232 47.0
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 2.9e-38 163.7 345 37.1
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 5.0e-38 162.9 202 49.0
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 8.5e-38 162.2 202 49.0
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 2.7e-36 157.1 203 45.8
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 1.0e-35 155.2 216 45.4
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.8e-35 154.5 204 47.5
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 2.3e-35 154.1 196 46.4
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 5.2e-35 152.9 197 48.2
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.5e-34 151.4 148 58.1
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 4.4e-34 149.8 187 48.7
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 5.7e-34 149.4 147 55.8
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 2.7e-31 140.6 212 39.6
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 1.7e-30 137.9 428 28.0
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 6.5e-30 136.0 195 42.6
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 1.4e-27 128.3 235 41.3
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 1.8e-27 127.9 104 63.5
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 8.3e-25 119.0 220 37.7
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 8.9e-19 99.0 210 39.0
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 2.9e-17 94.0 125 41.6
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 9.2e-16 89.0 273 27.8
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 2.7e-15 87.4 87 55.2
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.0e-14 85.5 128 39.1
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 1.3e-14 85.1 121 44.6
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 1.4e-11 75.1 86 44.2
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 9.2e-08 62.4 41 73.2


User provided reference genes

Program Settings