Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02738 Eucalyptus grandis HOM05D003533 ORTHO05D004009 2.0e-29 132.1 86 100.0
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 8.8e-17 90.1 86 59.3
Cfa019066 Carpinus fangiana HOM05D003533 ORTHO05D004009 7.0e-14 80.5 86 72.1
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 7.7e-13 77.0 88 50.0
PGR083G0433 Punica granatum HOM05D003533 ORTHO05D004009 1.0e-12 76.6 88 62.5
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.6e-12 73.6 87 52.9
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 1.5e-11 72.8 86 47.7
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 1.9e-11 72.4 86 48.8
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 2.5e-11 72.0 87 48.3
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 7.2e-11 70.5 86 45.3
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 2.1e-10 68.9 87 50.6
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 8.0e-10 67.0 86 44.2
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 8.0e-10 67.0 87 47.1
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 1.0e-09 66.6 75 49.3
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 1.4e-09 66.2 87 49.4
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.8e-09 65.9 87 46.0
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.3e-09 65.5 87 46.0
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.3e-09 65.5 87 46.0
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 2.3e-09 65.5 82 47.6
Potri.012G075800 Populus trichocarpa HOM05D003533 ORTHO05D004009 4.0e-09 64.7 86 66.3
Ciclev10023101m.g Citrus clementina HOM05D003533 ORTHO05D004009 5.2e-09 64.3 87 57.5
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 6.8e-09 63.9 82 45.1
Potri.015G070700 Populus trichocarpa HOM05D003533 ORTHO05D004009 8.9e-09 63.5 86 61.6
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 8.9e-09 63.5 87 44.8
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.5e-08 62.8 87 44.8
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 2.0e-08 62.4 87 47.1
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 2.6e-08 62.0 81 46.9
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 2.6e-08 62.0 86 45.3
Eucgr.K02881 Eucalyptus grandis HOM05D003533 ORTHO05D004009 3.4e-08 61.6 79 41.8
Sabra15G0095000 Salix brachista HOM05D003533 ORTHO05D004009 5.7e-08 60.8 86 59.3
Sabra15G0095900 Salix brachista HOM05D003533 ORTHO05D004009 5.7e-08 60.8 86 59.3
MD16G1084900 Malus domestica HOM05D003533 ORTHO05D004009 7.5e-08 60.5 81 43.2
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 9.8e-08 60.1 86 41.9
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 9.8e-08 60.1 86 41.9
Gohir.D05G321600 Gossypium hirsutum HOM05D003533 ORTHO05D004009 1.3e-07 59.7 84 42.9
Gorai.009G345100 Gossypium raimondii HOM05D003533 ORTHO05D004009 1.3e-07 59.7 84 42.9
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.3e-07 59.7 77 45.5
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.3e-07 59.7 87 43.7
Prupe.1G261100 Prunus persica HOM05D003533 ORTHO05D004009 2.2e-07 58.9 82 52.4
Haze_07436 Corylus avellana HOM05D003533 ORTHO05D004009 2.8e-07 58.5 86 61.6
Gohir.A05G319400 Gossypium hirsutum HOM05D003533 ORTHO05D004009 2.8e-07 58.5 84 41.7
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 2.8e-07 58.5 77 44.2
Sabra12G0053900 Salix brachista HOM05D003533 ORTHO05D004009 2.8e-07 58.5 86 62.8
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.8e-07 58.5 79 41.8
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 3.7e-07 58.2 84 42.9
CsaV3_1G001820 Cucumis sativus L. HOM05D003533 ORTHO05D004009 3.7e-07 58.2 85 49.4
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 4.9e-07 57.8 86 43.0
Lalb_Chr12g0201351 Lupinus albus HOM05D003533 ORTHO05D004009 4.9e-07 57.8 55 54.5
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 4.9e-07 57.8 84 42.9
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 6.3e-07 57.4 77 45.5
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 8.3e-07 57.0 77 41.6
Cfa009093 Carpinus fangiana HOM05D003533 ORTHO05D004009 1.1e-06 56.6 91 51.6
CiPaw.11G032200 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.1e-06 56.6 91 41.8
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 1.4e-06 56.2 86 38.4
Sed0002579 Sechium edule HOM05D003533 ORTHO05D004009 1.4e-06 56.2 86 41.9
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 1.4e-06 56.2 77 45.5
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 1.8e-06 55.8 77 42.9
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 1.8e-06 55.8 53 54.7
Aqoxy3G03117 Aquilegia oxysepala HOM05D003533 ORTHO05D004009 2.4e-06 55.5 84 42.9
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 2.4e-06 55.5 79 44.3
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 4.1e-06 54.7 86 39.5
AT1G19020 Arabidopsis thaliana HOM05D003533 ORTHO05D004009 5.4e-06 54.3 84 40.5
Carub.0001s1865 Capsella rubella HOM05D003533 ORTHO05D004009 5.4e-06 54.3 84 56.0
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 5.4e-06 54.3 87 40.2
THA.LOC104821473 Tarenaya hassleriana HOM05D003533 ORTHO05D004009 5.4e-06 54.3 86 54.7
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 5.4e-06 54.3 84 42.9
BcaB03g14468 Brassica carinata HOM05D003533 ORTHO05D004009 7.0e-06 53.9 80 43.8
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 7.0e-06 53.9 90 41.1
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 9.2e-06 53.5 87 41.4
THA.LOC109116474 Tarenaya hassleriana HOM05D003533 ORTHO05D004009 9.2e-06 53.5 82 56.1


User provided reference genes

Program Settings