Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02723 Eucalyptus grandis HOM05D001921 ORTHO05D001784 4.0e-83 311.6 184 100.0
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 7.7e-18 94.7 187 40.1
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 8.5e-17 91.3 187 38.5
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 1.1e-16 90.9 191 40.8
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.9e-16 90.1 191 40.8
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 2.5e-16 89.7 191 40.3
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 7.2e-16 88.2 190 37.9
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 1.2e-15 87.4 190 38.4
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.1e-15 86.7 191 39.8
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 8.8e-14 81.3 204 42.2
Cpa.g.sc127.3 Carica papaya HOM05D001921 ORTHO05D001784 2.0e-13 80.1 183 36.6
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 3.3e-13 79.3 183 35.0
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 7.4e-13 78.2 190 35.8
PGR044G0696 Punica granatum HOM05D001921 ORTHO05D001784 1.3e-12 77.4 206 40.3
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.8e-12 76.3 192 34.9
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.8e-12 76.3 119 45.4
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 3.7e-12 75.9 119 42.9
Glyma.06G064500 Glycine max HOM05D001921 ORTHO05D001784 3.7e-12 75.9 184 32.1
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 3.7e-12 75.9 126 40.5
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 4.8e-12 75.5 127 40.2
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 6.3e-12 75.1 217 40.1
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 6.3e-12 75.1 126 40.5
Gorai.001G036300 Gossypium raimondii HOM05D001921 ORTHO05D001784 8.2e-12 74.7 123 43.9
SabraUnG0005100 Salix brachista HOM05D001921 ORTHO05D001784 1.1e-11 74.3 189 35.4
AUR62031574 Chenopodium quinoa HOM05D000017 ORTHO05D000013 1.4e-11 73.9 119 37.8
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.4e-11 73.9 123 43.9
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 3.1e-11 72.8 122 44.3
Sabra06G0203000 Salix brachista HOM05D001921 ORTHO05D001784 3.1e-11 72.8 189 34.9
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 3.1e-11 72.8 204 34.8
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 9.1e-11 71.2 121 41.3
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 1.2e-10 70.9 187 33.2
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.6e-10 70.5 122 41.0
CiPaw.08G008000 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.6e-10 69.7 198 35.9
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 2.6e-10 69.7 195 35.9
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 3.5e-10 69.3 198 33.3
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 3.5e-10 69.3 207 31.9
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 5.9e-10 68.6 133 40.6
THA.LOC104804502 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 5.9e-10 68.6 183 34.4
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 7.7e-10 68.2 123 42.3
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.0e-09 67.8 124 42.7
CARHR239920 Cardamine hirsuta HOM05D001921 ORTHO05D001784 1.3e-09 67.4 205 31.7
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 1.3e-09 67.4 133 39.8
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 1.3e-09 67.4 194 33.0
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 1.7e-09 67.0 128 41.4
Potri.018G022400 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.7e-09 67.0 192 37.0
Potri.006G260000 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.2e-09 66.6 123 41.5
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 2.2e-09 66.6 137 40.9
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.9e-09 66.2 170 31.2
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 2.9e-09 66.2 121 42.1
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 2.9e-09 66.2 121 42.1
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 2.9e-09 66.2 116 37.9
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 5.0e-09 65.5 168 35.1
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 5.0e-09 65.5 116 37.9
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 8.5e-09 64.7 129 38.8
Thhalv10026353m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 8.5e-09 64.7 198 32.8
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 1.1e-08 64.3 189 33.3
CiPaw.16G117000 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.1e-08 64.3 197 31.0
THA.LOC104803850 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 1.1e-08 64.3 211 37.4
Sc23g0006510 Simmondsia chinensis HOM05D001921 ORTHO05D001784 1.5e-08 63.9 119 44.5
Sabra18G0025100 Salix brachista HOM05D001921 ORTHO05D001784 1.9e-08 63.5 194 32.5
Glyma.04G063200 Glycine max HOM05D001921 ORTHO05D001784 2.5e-08 63.2 191 30.4
Hma1.2p1_0511F.1_g169240 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 2.5e-08 63.2 194 34.5
Cfa013095 Carpinus fangiana HOM05D001921 ORTHO05D001784 3.2e-08 62.8 189 33.3
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 3.2e-08 62.8 135 40.0
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 3.2e-08 62.8 133 37.6
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 5.5e-08 62.0 189 35.4
PGSC0003DMG400029898 Solanum tuberosum HOM05D001921 ORTHO05D001784 5.5e-08 62.0 117 38.5
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 5.5e-08 62.0 120 36.7
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 5.5e-08 62.0 122 38.5
PGSC0003DMG401013517 Solanum tuberosum HOM05D001921 ORTHO05D001784 7.2e-08 61.6 49 63.3
Sp7g29820 Schrenkiella parvula HOM05D001921 ORTHO05D001784 9.4e-08 61.2 121 39.7
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 9.4e-08 61.2 123 43.1
BcaC07g40877 Brassica carinata HOM05D018780 ORTHO05D001784 1.2e-07 60.8 183 41.5
BcaC07g40878 Brassica carinata HOM05D018780 ORTHO05D001784 1.2e-07 60.8 183 41.5
BraA03t15157Z Brassica rapa HOM05D001921 ORTHO05D001784 1.6e-07 60.5 193 32.6
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.6e-07 60.5 207 31.4
Lsat_1_v5_gn_6_115320 Lactuca sativa HOM05D001921 ORTHO05D001784 1.6e-07 60.5 234 28.6
Manes.03G011300 Manihot esculenta HOM05D001921 ORTHO05D001784 1.6e-07 60.5 197 33.0
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 1.6e-07 60.5 197 31.0
Aa31sc859G10 Aethionema arabicum HOM05D001921 ORTHO05D001784 2.7e-07 59.7 116 37.9
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 2.7e-07 59.7 137 39.4
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.7e-07 59.7 137 39.4
Lj4g0015946 Lotus japonicus HOM05D001921 ORTHO05D001784 2.7e-07 59.7 128 42.2
Oeu030377.1 Olea europaea HOM05D001921 ORTHO05D001784 2.7e-07 59.7 201 29.9
A03p61190 Brassica napus HOM05D001921 ORTHO05D001784 3.6e-07 59.3 194 33.5
C07p59050 Brassica napus HOM05D001921 ORTHO05D001784 3.6e-07 59.3 195 33.8
DCAR_017895 Daucus carota HOM05D001921 ORTHO05D001784 3.6e-07 59.3 124 39.5
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 3.6e-07 59.3 172 32.0
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 4.7e-07 58.9 130 36.2
DCAR_014829 Daucus carota HOM05D001921 ORTHO05D001784 4.7e-07 58.9 122 40.2
THA.LOC104818602 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 6.1e-07 58.5 117 35.9
BolC7t46353H Brassica oleracea HOM05D001921 ORTHO05D001784 8.0e-07 58.2 198 34.3
Carub.0007s0853 Capsella rubella HOM05D001921 ORTHO05D001784 8.0e-07 58.2 213 30.5
CARHR116380 Cardamine hirsuta HOM05D001921 ORTHO05D001784 8.0e-07 58.2 188 31.9
Thhalv10000356m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 8.0e-07 58.2 186 34.4
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 8.0e-07 58.2 137 39.4
Lalb_Chr11g0072831 Lupinus albus HOM05D001921 ORTHO05D001784 8.0e-07 58.2 130 41.5
Actinidia32376 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.0e-06 57.8 173 33.5
A01p06280 Brassica napus HOM05D001921 ORTHO05D001784 1.0e-06 57.8 128 35.2
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 1.0e-06 57.8 119 38.7
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.0e-06 57.8 191 30.4
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.0e-06 57.8 131 36.6
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 1.4e-06 57.4 188 31.9
SGA_v2.0_scaffold57G20294 Striga asiatica HOM05D001921 ORTHO05D001784 1.4e-06 57.4 129 38.0
Actinidia38704 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.8e-06 57.0 177 31.1
Ca_21607_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 1.8e-06 57.0 131 39.7
Hma1.2p1_0228F.1_g096620 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.8e-06 57.0 121 37.2
Aa31LG2G18040 Aethionema arabicum HOM05D001921 ORTHO05D001784 2.3e-06 56.6 193 34.2
BcaB08g35169 Brassica carinata HOM05D018780 ORTHO05D001784 2.3e-06 56.6 183 32.2
Hma1.2p1_0643F.1_g194540 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 2.3e-06 56.6 128 35.9
Medtr4g116830 Medicago truncatula HOM05D001921 ORTHO05D001784 2.3e-06 56.6 121 39.7
QL06p006408 Quercus lobata HOM05D001921 ORTHO05D001784 2.3e-06 56.6 119 38.7
Sed0007577 Sechium edule HOM05D001921 ORTHO05D001784 2.3e-06 56.6 117 40.2
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 3.0e-06 56.2 120 38.3
Sed0017709 Sechium edule HOM05D001921 ORTHO05D001784 3.0e-06 56.2 129 40.3
Ah.16g104850 Amaranthus hybridus HOM05D001921 ORTHO05D001784 4.0e-06 55.8 126 36.5
AL7G19870 Arabidopsis lyrata HOM05D001921 ORTHO05D001784 4.0e-06 55.8 121 37.2
Glyma.17G104300 Glycine max HOM05D001921 ORTHO05D001784 4.0e-06 55.8 124 39.5
Lalb_Chr08g0244291 Lupinus albus HOM05D001921 ORTHO05D001784 4.0e-06 55.8 184 29.3
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 4.0e-06 55.8 122 39.3
Oeu022233.1 Olea europaea HOM05D001921 ORTHO05D001784 4.0e-06 55.8 124 38.7
Peaxi162Scf00769g00001 Petunia axillaris HOM05D001921 ORTHO05D001784 4.0e-06 55.8 53 54.7
Nitab4.5_0002295g0070 Nicotiana tabacum HOM05D001921 ORTHO05D001784 5.2e-06 55.5 49 57.1
Nitab4.5_0009936g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 5.2e-06 55.5 49 57.1
MELO3C004451.2 Cucumis melo HOM05D001921 ORTHO05D001784 6.7e-06 55.1 132 37.1
CsaV3_6G005540 Cucumis sativus L. HOM05D001921 ORTHO05D001784 6.7e-06 55.1 117 38.5
unitig_32.g11745 Utricularia gibba HOM05D001921 ORTHO05D001784 6.7e-06 55.1 114 38.6
unitig_748.g8567 Utricularia gibba HOM05D001921 ORTHO05D001784 6.7e-06 55.1 195 32.3
VMungo1309G2915 Vigna mungo HOM05D001921 ORTHO05D001784 6.7e-06 55.1 200 30.5
AT2G25250 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 8.8e-06 54.7 193 30.1
MELO3C021383.2 Cucumis melo HOM05D001921 ORTHO05D001784 8.8e-06 54.7 117 38.5
TAR636G3386 Trochodendron aralioides HOM05D001921 ORTHO05D001784 8.8e-06 54.7 202 30.2


User provided reference genes

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