Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 9.2e-311 1069.3 518 100.0
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.4e-303 1044.6 518 97.9
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.2e-280 968.4 518 91.5
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 8.5e-256 886.7 526 84.2
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 5.0e-232 807.7 516 74.8
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 9.4e-231 803.5 505 76.0
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.2e-227 792.3 518 73.0
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.2e-227 792.3 518 73.0
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 8.3e-227 790.4 509 75.6
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.6e-225 786.2 504 74.0
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 2.9e-224 781.9 505 74.1
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 3.8e-224 781.6 507 72.6
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 5.0e-224 781.2 503 74.8
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 6.5e-224 780.8 504 73.8
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 8.5e-224 780.4 511 72.2
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.2e-223 778.5 492 75.4
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 4.0e-221 771.5 506 74.3
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 3.4e-220 768.5 514 72.6
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 3.4e-220 768.5 508 71.9
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 4.4e-220 768.1 507 72.0
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 3.7e-219 765.0 505 73.3
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.4e-218 762.3 503 72.4
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 5.4e-218 761.1 503 72.6
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 9.2e-218 760.4 509 72.9
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 3.5e-217 758.4 497 70.6
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 5.9e-217 757.7 509 72.1
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 7.7e-217 757.3 503 72.0
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 6.6e-216 754.2 487 73.1
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 3.3e-215 751.9 508 70.7
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 3.3e-215 751.9 485 72.8
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 5.6e-215 751.1 509 71.3
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 7.3e-215 750.7 519 70.5
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 9.5e-215 750.4 507 70.6
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.6e-214 749.6 482 72.2
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 2.8e-214 748.8 503 71.2
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.6e-214 748.4 505 70.7
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 6.1e-214 747.7 501 71.1
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 6.1e-214 747.7 518 69.7
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 8.0e-214 747.3 509 70.3
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.0e-213 746.9 490 71.8
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.8e-213 746.1 497 70.6
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 4.0e-213 745.0 486 71.6
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 5.2e-213 744.6 492 73.0
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 5.2e-213 744.6 478 74.3
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 8.9e-213 743.8 503 72.0
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.2e-212 743.4 509 70.1
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 2.0e-212 742.7 508 70.7
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 2.0e-212 742.7 491 70.3
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 7.5e-212 740.7 493 71.0
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 2.2e-211 739.2 493 71.0
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.1e-210 736.9 503 70.8
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 1.1e-210 736.9 501 69.5
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.1e-210 736.9 482 71.8
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.4e-210 735.7 503 70.4
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 9.2e-210 733.8 539 66.6
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 1.2e-209 733.4 501 68.9
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 2.0e-209 732.6 501 70.1
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.7e-209 732.3 491 69.9
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 7.8e-209 730.7 489 71.0
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 3.9e-208 728.4 491 69.5
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 8.6e-208 727.2 455 76.3
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 3.3e-207 725.3 495 68.9
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 4.3e-207 724.9 489 69.3
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 1.2e-206 723.4 471 72.6
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.0e-205 720.3 487 69.2
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.2e-204 716.8 463 73.9
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 1.3e-203 713.4 484 69.6
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 4.9e-203 711.4 509 66.8
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 6.4e-203 711.1 488 70.1
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 7.0e-202 707.6 496 68.1
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.5e-201 705.3 509 66.4
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 4.6e-201 704.9 502 68.3
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.7e-200 703.0 503 68.0
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 2.3e-200 702.6 508 67.5
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 5.0e-200 701.4 518 66.2
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 6.6e-200 701.0 495 67.1
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.5e-199 699.9 511 66.3
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 2.1e-198 696.0 499 67.9
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 3.6e-198 695.3 502 67.7
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 8.1e-198 694.1 495 66.7
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.4e-197 693.3 477 67.1
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 4.0e-197 691.8 505 65.7
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 5.2e-197 691.4 502 66.9
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 5.2e-197 691.4 502 67.1
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 5.2e-197 691.4 502 66.9
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.9e-195 685.6 491 65.8
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 1.9e-194 682.9 459 71.2
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.0e-192 677.2 483 67.7
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 2.1e-190 669.5 510 62.7
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 6.2e-190 667.9 549 61.9
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 5.8e-188 661.4 501 63.3
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 5.4e-186 654.8 499 65.5
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.0e-184 650.6 523 61.0
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 8.1e-182 641.0 489 64.8
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 1.2e-172 610.5 500 57.6
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 1.3e-168 597.0 495 60.2
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 2.9e-155 552.7 380 68.9
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 8.7e-152 541.2 372 70.2
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-150 537.3 500 59.2
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 1.1e-143 514.2 356 67.7
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 1.6e-142 510.4 358 69.6
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 6.9e-133 478.4 356 63.2
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.1e-113 413.7 303 65.0
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 9.8e-111 404.8 312 61.9
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 4.9e-94 349.4 240 64.2
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 4.6e-84 316.2 219 63.0
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 6.6e-67 259.2 178 69.7
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 3.3e-66 256.9 183 63.4
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 8.1e-57 225.7 142 74.6
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 4.2e-53 213.4 148 62.8
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 2.7e-20 104.4 124 46.8
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.2e-13 80.9 52 69.2
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.3e-11 74.7 83 48.2
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 1.4e-08 65.5 79 44.3


User provided reference genes

Program Settings