Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.1e-74 283.1 138 100.0
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 3.7e-73 278.1 138 97.8
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 2.5e-45 185.7 111 74.8
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 5.5e-45 184.5 110 77.3
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 1.2e-44 183.3 112 74.1
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 1.2e-44 183.3 112 74.1
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 1.0e-43 180.3 114 71.9
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 1.4e-43 179.9 112 73.2
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 1.8e-40 169.5 114 67.5
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 4.1e-40 168.3 114 67.5
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 5.4e-40 167.9 110 68.2
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 5.4e-40 167.9 110 68.2
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 5.4e-40 167.9 114 67.5
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 7.0e-40 167.5 110 69.1
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.2e-39 166.8 112 66.1
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 2.0e-39 166.0 114 66.7
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 2.7e-39 165.6 114 65.8
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.7e-39 165.6 110 67.3
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 3.5e-39 165.2 110 66.4
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 4.5e-39 164.9 110 68.2
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 1.3e-38 163.3 110 70.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.7e-38 162.9 109 68.8
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 2.2e-38 162.5 110 65.5
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 2.9e-38 162.2 112 68.8
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 2.9e-38 162.2 114 65.8
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 3.8e-38 161.8 110 66.4
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.5e-38 161.0 113 64.6
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 8.5e-38 160.6 111 66.7
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 8.5e-38 160.6 112 65.2
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 8.5e-38 160.6 112 64.3
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.1e-37 160.2 112 65.2
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 1.5e-37 159.8 108 65.7
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.5e-37 159.8 108 65.7
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.5e-37 159.8 112 65.2
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 1.9e-37 159.5 102 71.6
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 1.9e-37 159.5 110 66.4
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 1.9e-37 159.5 110 65.5
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 1.9e-37 159.5 102 73.5
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.9e-37 159.5 103 68.9
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.5e-37 159.1 112 64.3
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 2.5e-37 159.1 96 74.0
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 3.2e-37 158.7 110 67.3
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 4.2e-37 158.3 114 63.2
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 7.2e-37 157.5 105 68.6
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 7.2e-37 157.5 115 64.3
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 9.4e-37 157.1 99 72.7
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 1.2e-36 156.8 99 71.7
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 2.1e-36 156.0 99 72.7
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 2.1e-36 156.0 107 67.3
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 3.6e-36 155.2 99 70.7
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 8.0e-36 154.1 100 69.0
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 8.0e-36 154.1 100 69.0
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 8.0e-36 154.1 100 69.0
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 8.0e-36 154.1 110 62.7
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 8.0e-36 154.1 110 62.7
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 1.0e-35 153.7 102 67.6
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 1.0e-35 153.7 99 68.7
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.4e-35 153.3 110 62.7
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 4.0e-35 151.8 99 70.7
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 6.8e-35 151.0 110 60.9
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.5e-34 149.8 124 60.5
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 2.0e-34 149.4 111 63.1
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 2.0e-34 149.4 110 61.8
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 2.6e-34 149.1 114 59.6
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 2.6e-34 149.1 99 67.7
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 3.4e-34 148.7 114 59.6
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 4.4e-34 148.3 105 62.9
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 9.8e-34 147.1 101 67.3
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 1.3e-33 146.7 98 67.3
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 1.3e-33 146.7 98 68.4
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.7e-33 146.4 97 68.0
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 1.7e-33 146.4 99 66.7
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 1.7e-33 146.4 102 68.6
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 2.8e-33 145.6 99 64.6
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 2.8e-33 145.6 116 59.5
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 2.8e-33 145.6 119 60.5
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 3.7e-33 145.2 110 60.9
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 3.7e-33 145.2 99 66.7
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 3.7e-33 145.2 121 57.0
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 4.9e-33 144.8 97 66.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 4.9e-33 144.8 92 69.6
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 6.3e-33 144.4 97 66.0
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 6.3e-33 144.4 99 68.7
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 6.3e-33 144.4 99 64.6
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 8.3e-33 144.1 99 66.7
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.1e-32 143.7 97 63.9
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.8e-32 142.9 98 67.3
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 2.4e-32 142.5 98 64.3
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 3.1e-32 142.1 101 66.3
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.1e-32 141.7 134 52.2
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 5.4e-32 141.4 112 59.8
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 7.0e-32 141.0 95 66.3
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 9.1e-32 140.6 99 63.6
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 9.1e-32 140.6 99 63.6
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 1.6e-31 139.8 99 62.6
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.7e-31 139.0 126 55.6
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 2.7e-31 139.0 89 69.7
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 3.5e-31 138.7 99 63.6
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 4.5e-31 138.3 110 59.1
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 4.5e-31 138.3 107 60.7
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 4.5e-31 138.3 99 64.6
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 5.9e-31 137.9 98 64.3
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.3e-30 136.7 89 66.3
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 5.5e-29 131.3 99 59.6
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 3.6e-28 128.6 81 72.8
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 8.0e-28 127.5 89 64.0
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 2.3e-27 125.9 84 71.4
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 6.8e-27 124.4 86 64.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 8.9e-27 124.0 92 59.8
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.9e-27 124.0 100 55.0
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.2e-26 123.6 89 60.7
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 1.5e-26 123.2 107 52.3
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.7e-26 121.3 105 55.2
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.3e-25 117.5 105 54.3
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.1e-24 117.1 103 54.4
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.8e-24 116.3 95 55.8
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 2.3e-22 109.4 72 66.7
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 5.0e-22 108.2 87 58.6
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.2e-20 103.6 101 49.5
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 1.2e-20 103.6 93 51.6
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.6e-20 103.2 74 63.5
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 4.0e-19 98.6 75 57.3
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 2.2e-17 92.8 64 64.1
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 2.4e-16 89.4 63 60.3
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 7.0e-16 87.8 66 60.6
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 1.6e-15 86.7 59 61.0
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 9.5e-13 77.4 65 63.1
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.1e-12 74.3 60 55.0
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 6.4e-09 64.7 69 46.4
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 1.1e-08 63.9 40 72.5
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 4.1e-08 62.0 78 39.7


User provided reference genes

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