Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.3e-157 559.7 290 100.0
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.6e-121 439.1 231 98.7
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 2.0e-89 333.2 231 71.4
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 3.6e-86 322.4 231 71.9
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 4.7e-86 322.0 232 72.4
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 4.7e-86 322.0 232 71.6
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 1.8e-85 320.1 231 72.3
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 2.3e-85 319.7 231 71.9
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 8.8e-85 317.8 231 68.0
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 1.7e-83 313.5 233 67.4
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 2.8e-83 312.8 231 68.0
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 6.3e-83 311.6 231 68.0
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 6.3e-83 311.6 231 68.0
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 6.3e-83 311.6 231 69.7
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 5.3e-82 308.5 232 68.5
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 7.0e-82 308.1 231 66.7
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 9.1e-82 307.8 224 69.2
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 9.1e-82 307.8 231 70.1
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 9.1e-82 307.8 233 69.1
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 2.0e-81 306.6 231 67.5
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 2.0e-81 306.6 231 70.1
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 2.6e-81 306.2 231 68.8
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.6e-81 306.2 231 68.8
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 3.5e-81 305.8 231 68.8
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 7.7e-81 304.7 233 67.4
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 1.0e-80 304.3 231 66.7
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.3e-80 303.9 224 68.3
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 3.8e-80 302.4 231 67.5
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 5.0e-80 302.0 224 68.3
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 8.5e-80 301.2 232 69.0
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 8.5e-80 301.2 233 69.1
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 4.2e-79 298.9 227 67.0
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 7.2e-79 298.1 227 68.7
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 1.6e-78 297.0 231 66.7
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 1.6e-78 297.0 232 64.7
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 3.6e-78 295.8 233 65.2
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 6.1e-78 295.0 232 65.5
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 8.0e-78 294.7 234 67.5
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 5.2e-77 292.0 231 64.1
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 5.2e-77 292.0 231 64.1
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 1.5e-76 290.4 232 65.5
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 2.6e-76 289.7 228 67.5
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 3.3e-76 289.3 231 68.0
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 3.3e-76 289.3 232 64.7
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 3.7e-75 285.8 231 63.6
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 4.8e-75 285.4 233 65.7
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.4e-74 283.9 231 66.7
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 9.1e-74 281.2 242 60.7
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 1.2e-73 280.8 226 65.9
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 1.6e-73 280.4 224 65.6
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 4.5e-73 278.9 231 61.9
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 7.7e-73 278.1 231 62.3
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 7.7e-73 278.1 231 62.3
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 7.7e-73 278.1 231 63.2
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 2.2e-72 276.6 234 61.1
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 6.5e-72 275.0 231 66.2
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 8.5e-72 274.6 231 60.2
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 1.1e-71 274.2 224 65.6
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 1.1e-71 274.2 231 61.9
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 1.5e-71 273.9 233 62.2
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 3.2e-71 272.7 231 61.5
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 2.1e-70 270.0 231 58.9
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 4.7e-70 268.9 224 65.2
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 8.0e-70 268.1 232 60.3
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 1.4e-69 267.3 233 61.8
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 2.3e-69 266.5 224 61.6
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.2e-69 265.4 281 53.4
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 3.4e-68 262.7 223 60.5
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 3.4e-68 262.7 236 61.9
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 5.7e-68 261.9 232 60.8
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 1.3e-67 260.8 224 61.6
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 2.2e-67 260.0 231 58.4
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 2.8e-67 259.6 230 60.4
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 4.8e-67 258.8 231 60.2
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 1.1e-66 257.7 243 59.3
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 1.4e-66 257.3 233 60.1
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 1.4e-66 257.3 231 58.0
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 2.4e-66 256.5 231 60.2
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 4.1e-66 255.8 224 63.4
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 1.6e-65 253.8 224 60.3
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 2.7e-65 253.1 236 60.2
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 7.7e-65 251.5 231 56.3
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 1.3e-64 250.8 238 58.4
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 2.9e-64 249.6 217 60.4
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 1.9e-63 246.9 212 60.4
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 2.5e-63 246.5 231 58.4
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 4.2e-63 245.7 227 59.5
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 4.0e-61 239.2 231 54.5
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 6.8e-61 238.4 231 53.7
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 2.2e-59 233.4 255 52.5
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 1.2e-57 227.6 234 53.0
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 1.0e-56 224.6 257 50.6
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 2.9e-56 223.0 212 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 7.3e-55 218.4 233 51.1
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 2.1e-54 216.9 224 54.0
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 8.0e-54 214.9 166 68.1
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 1.0e-53 214.5 236 49.2
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 4.0e-53 212.6 234 49.1
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 5.7e-52 208.8 166 65.7
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 9.8e-52 208.0 234 48.7
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.3e-51 207.6 189 56.6
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 4.9e-51 205.7 228 49.6
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.1e-50 202.6 232 52.2
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 2.7e-49 199.9 224 50.9
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 3.5e-49 199.5 231 49.8
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.3e-48 197.6 222 47.7
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 7.3e-47 191.8 159 64.2
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 4.7e-46 189.1 229 48.9
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 4.4e-44 182.6 186 53.8
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-33 146.7 262 35.1
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 8.6e-32 141.7 108 64.8
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 3.1e-29 133.3 102 65.7
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 6.8e-29 132.1 231 36.8
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 7.6e-28 128.6 146 54.1
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.3e-27 127.9 194 43.8
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 3.2e-26 123.2 93 63.4
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.1e-26 122.9 95 63.2
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 7.1e-26 122.1 87 67.8
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 3.9e-24 116.3 274 31.0
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 1.2e-20 104.8 90 57.8
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 1.5e-20 104.4 90 56.7
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 1.5e-20 104.4 199 36.7
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 3.4e-20 103.2 90 56.7
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.9e-19 100.1 74 70.3
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 4.9e-19 99.4 90 55.6
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 2.4e-18 97.1 168 40.5
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.4e-18 97.1 168 40.5
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 1.2e-17 94.7 63 71.4
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 3.3e-15 86.7 92 57.6
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.1e-13 80.1 75 56.0
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 4.0e-13 79.7 77 49.4
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 9.9e-12 75.1 60 65.0
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 2.2e-11 73.9 54 70.4
SGA_v2.0_scaffold100G29569 Striga asiatica HOM05D005809 ORTHO05D007259 8.1e-06 55.5 79 45.6


User provided reference genes

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