Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.8e-98 362.5 168 100.0
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.8e-98 362.5 168 100.0
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 5.3e-90 334.3 168 89.3
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 6.9e-90 334.0 168 89.3
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 4.4e-89 331.3 168 89.9
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 7.6e-89 330.5 168 89.9
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 7.6e-89 330.5 168 89.9
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 7.6e-89 330.5 165 89.1
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.3e-88 329.7 168 88.1
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 1.3e-88 329.7 168 89.3
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 1.3e-88 329.7 165 90.3
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.7e-88 329.3 168 88.7
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 1.7e-88 329.3 168 88.7
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 2.2e-88 328.9 168 87.5
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.1e-87 326.6 168 88.1
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.1e-87 326.6 168 86.9
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 1.4e-87 326.2 168 86.9
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 1.9e-87 325.9 165 87.9
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.9e-87 325.9 168 88.1
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 2.4e-87 325.5 168 86.9
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 2.4e-87 325.5 168 88.1
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 3.2e-87 325.1 168 86.3
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 3.2e-87 325.1 168 86.3
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 4.2e-87 324.7 168 86.3
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 9.3e-87 323.6 168 86.9
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 1.6e-86 322.8 168 86.3
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 2.7e-86 322.0 166 87.3
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 2.7e-86 322.0 168 87.5
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 3.5e-86 321.6 168 85.7
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 3.5e-86 321.6 168 85.1
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.6e-86 321.2 168 86.3
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 6.0e-86 320.9 166 86.1
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 6.0e-86 320.9 164 87.2
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 7.9e-86 320.5 165 86.7
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 7.9e-86 320.5 166 85.5
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 7.9e-86 320.5 166 86.1
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.0e-85 320.1 162 89.5
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 1.0e-85 320.1 167 85.6
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 1.0e-85 320.1 168 85.1
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 1.3e-85 319.7 170 84.7
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.3e-85 319.7 167 85.0
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.3e-85 319.7 167 85.0
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 1.3e-85 319.7 165 86.7
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.3e-85 319.7 168 85.1
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.3e-85 319.7 165 86.1
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 1.7e-85 319.3 161 88.2
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 3.0e-85 318.5 168 85.7
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 3.9e-85 318.2 169 85.8
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 3.9e-85 318.2 165 85.5
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 5.1e-85 317.8 170 84.7
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 5.1e-85 317.8 168 83.9
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 6.6e-85 317.4 168 84.5
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 8.7e-85 317.0 170 84.1
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 8.7e-85 317.0 168 85.1
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 1.1e-84 316.6 168 85.1
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.1e-84 316.6 168 85.7
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 1.5e-84 316.2 156 91.0
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.5e-84 316.2 166 85.5
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 1.9e-84 315.8 160 88.1
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.9e-84 315.8 168 85.1
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.9e-84 315.8 168 85.1
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 2.5e-84 315.5 168 83.9
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.5e-84 315.5 168 83.9
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.5e-84 315.5 168 83.9
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 3.3e-84 315.1 168 84.5
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 4.3e-84 314.7 165 84.8
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.6e-83 312.8 174 80.5
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.8e-83 312.0 162 86.4
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 2.8e-83 312.0 166 84.9
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 4.8e-83 311.2 167 84.4
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 4.8e-83 311.2 167 84.4
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 6.2e-83 310.8 174 80.5
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 6.2e-83 310.8 157 89.2
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 1.1e-82 310.1 174 79.9
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 1.1e-82 310.1 172 80.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 2.4e-82 308.9 174 79.9
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 3.1e-82 308.5 161 83.2
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 5.3e-82 307.8 163 84.0
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 6.9e-82 307.4 161 83.2
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 6.9e-82 307.4 161 83.2
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 6.9e-82 307.4 161 83.2
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 6.9e-82 307.4 161 83.2
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 6.9e-82 307.4 161 83.2
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 6.9e-82 307.4 165 83.6
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 9.0e-82 307.0 162 85.2
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 9.0e-82 307.0 162 84.6
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.2e-81 306.6 163 84.7
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 1.2e-81 306.6 162 84.6
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 2.0e-81 305.8 163 81.6
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 3.4e-81 305.1 165 83.0
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 4.5e-81 304.7 168 82.1
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 9.9e-81 303.5 160 83.1
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 3.8e-80 301.6 160 84.4
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 1.1e-79 300.1 163 79.1
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 2.4e-79 298.9 183 76.5
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 4.2e-79 298.1 166 80.1
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 1.8e-77 292.7 185 73.0
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 6.5e-72 274.2 144 87.5
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.7e-64 249.6 166 69.3
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 9.3e-63 243.8 120 91.7
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 2.2e-59 232.6 160 63.1
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 7.2e-55 217.6 122 77.9
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.2e-51 206.1 110 83.6
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.7e-46 189.1 101 79.2
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 4.4e-36 155.2 113 60.2
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.6e-30 136.7 69 91.3
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.8e-26 123.2 66 87.9
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 5.5e-23 111.7 62 79.0
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.8e-18 96.7 50 88.0
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.2e-17 94.0 52 78.8


User provided reference genes

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