Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.8e-70 269.2 148 100.0
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.2e-67 258.5 148 96.6
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 1.6e-42 176.4 155 69.0
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 3.0e-41 172.2 151 67.5
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.2e-40 170.2 149 67.8
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.3e-39 166.8 133 69.9
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.7e-39 166.4 153 64.1
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 2.2e-39 166.0 153 66.0
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.8e-39 165.6 133 69.2
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 3.7e-39 165.2 150 64.7
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 6.3e-39 164.5 133 69.9
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 1.8e-38 162.9 154 67.5
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 2.4e-38 162.5 149 67.1
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 5.4e-38 161.4 154 67.5
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 1.6e-37 159.8 154 66.2
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 1.6e-37 159.8 153 61.4
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 5.9e-37 157.9 148 66.9
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 7.8e-37 157.5 149 65.1
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 7.8e-37 157.5 149 63.1
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 1.0e-36 157.1 160 61.9
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 1.3e-36 156.8 154 63.6
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.9e-36 155.6 149 63.1
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 2.9e-36 155.6 150 65.3
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 1.5e-35 153.3 152 63.8
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 1.9e-35 152.9 146 67.1
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 5.6e-35 151.4 148 60.8
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 5.6e-35 151.4 153 63.4
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 5.6e-35 151.4 145 65.5
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 7.3e-35 151.0 153 64.1
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 7.3e-35 151.0 153 62.7
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 9.5e-35 150.6 153 62.7
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 9.5e-35 150.6 148 60.1
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.2e-34 150.2 151 62.9
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.6e-34 149.8 153 60.8
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 2.8e-34 149.1 150 61.3
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 4.7e-34 148.3 150 62.0
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 1.0e-33 147.1 150 61.3
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 2.3e-33 146.0 149 61.1
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 2.3e-33 146.0 146 62.3
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 2.3e-33 146.0 146 62.3
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 3.0e-33 145.6 139 65.5
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 3.0e-33 145.6 149 61.1
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 3.0e-33 145.6 149 61.1
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 3.0e-33 145.6 149 61.1
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 3.0e-33 145.6 150 64.7
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 4.0e-33 145.2 139 65.5
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 4.0e-33 145.2 147 61.9
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 5.2e-33 144.8 147 61.9
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 6.8e-33 144.4 153 63.4
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 6.8e-33 144.4 148 60.1
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 6.8e-33 144.4 147 66.0
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 6.8e-33 144.4 155 61.3
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 8.9e-33 144.1 151 59.6
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.2e-32 143.7 141 61.7
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.2e-32 143.7 123 68.3
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.5e-32 143.3 147 61.9
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 3.4e-32 142.1 152 60.5
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 5.8e-32 141.4 147 61.2
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 5.8e-32 141.4 147 61.2
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 5.8e-32 141.4 149 61.1
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 7.5e-32 141.0 142 61.3
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.5e-32 141.0 148 62.2
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.5e-32 141.0 149 61.1
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.5e-32 141.0 149 61.1
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 9.8e-32 140.6 151 60.3
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 9.8e-32 140.6 145 62.1
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 1.3e-31 140.2 147 61.2
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 8.3e-31 137.5 153 61.4
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 8.3e-31 137.5 150 60.0
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.4e-30 136.7 140 62.9
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.9e-30 136.3 151 58.3
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.4e-30 136.0 152 59.9
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 3.2e-30 135.6 114 69.3
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 7.0e-30 134.4 148 58.1
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 7.0e-30 134.4 148 58.8
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 7.0e-30 134.4 148 57.4
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.6e-29 133.3 147 58.5
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.0e-29 132.9 146 60.3
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.5e-29 132.1 121 66.9
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 3.5e-29 132.1 148 58.1
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 4.6e-29 131.7 143 59.4
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 7.8e-29 131.0 153 60.8
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.3e-28 130.2 141 59.6
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.7e-28 129.8 153 56.9
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.3e-28 129.4 79 86.1
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 2.3e-28 129.4 94 76.6
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 3.0e-28 129.0 113 68.1
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 3.9e-28 128.6 112 67.0
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 6.6e-28 127.9 146 56.8
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 8.6e-28 127.5 108 65.7
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 8.6e-28 127.5 136 58.8
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 1.9e-27 126.3 138 62.3
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.5e-27 125.9 83 79.5
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 3.3e-27 125.6 70 91.4
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 4.3e-27 125.2 146 56.8
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 5.6e-27 124.8 155 59.4
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 5.6e-27 124.8 142 57.7
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 7.3e-27 124.4 146 55.5
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 9.5e-27 124.0 70 90.0
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 1.2e-26 123.6 148 56.8
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.6e-26 123.2 146 56.2
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 2.1e-26 122.9 146 56.2
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.5e-24 116.7 152 57.9
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 2.6e-24 115.9 125 54.4
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.6e-24 115.9 151 51.7
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 5.4e-22 108.2 128 57.8
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 2.1e-21 106.3 149 49.7
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 6.0e-21 104.8 144 48.6
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 6.0e-21 104.8 124 56.5
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.9e-19 99.8 124 57.3
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 8.1e-18 94.4 61 78.7
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.8e-17 93.2 125 56.0
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 3.1e-17 92.4 208 40.4
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 5.2e-17 91.7 165 44.8
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 5.2e-17 91.7 145 47.6
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 2.0e-16 89.7 141 48.2
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.9e-15 85.9 115 49.6
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 4.1e-14 82.0 126 52.4
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 9.5e-11 70.9 61 63.9
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 2.4e-09 66.2 101 47.5
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 4.0e-09 65.5 108 47.2
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.5e-08 63.5 83 45.8
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 1.7e-07 60.1 48 72.9
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.9e-07 59.3 101 45.5
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 6.4e-07 58.2 61 49.2


User provided reference genes

Program Settings