Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 2.4e-69 265.4 136 100.0
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 2.5e-29 132.5 76 86.8
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 4.2e-29 131.7 76 85.5
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 4.2e-29 131.7 76 85.5
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 9.3e-29 130.6 76 82.9
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 2.1e-28 129.4 76 85.5
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 3.5e-28 128.6 76 81.6
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 3.5e-28 128.6 76 82.9
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 4.6e-28 128.3 77 81.8
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 4.6e-28 128.3 95 71.6
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 6.0e-28 127.9 76 82.9
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 7.9e-28 127.5 75 84.0
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 7.9e-28 127.5 79 78.5
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 1.3e-27 126.7 76 82.9
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 1.8e-27 126.3 76 81.6
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.8e-27 126.3 76 80.3
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 1.8e-27 126.3 76 81.6
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 3.0e-27 125.6 76 80.3
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 3.0e-27 125.6 76 81.6
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 3.0e-27 125.6 76 81.6
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 5.1e-27 124.8 89 71.9
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 5.1e-27 124.8 76 78.9
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 5.1e-27 124.8 76 78.9
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 6.7e-27 124.4 76 80.3
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 6.7e-27 124.4 76 78.9
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 8.7e-27 124.0 76 77.6
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 8.7e-27 124.0 75 81.3
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 8.7e-27 124.0 75 81.3
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.1e-26 123.6 75 81.3
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.1e-26 123.6 76 81.6
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 1.5e-26 123.2 76 81.6
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.5e-26 123.2 75 81.3
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 1.9e-26 122.9 75 78.7
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.9e-26 122.9 76 80.3
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 1.9e-26 122.9 74 81.1
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 1.9e-26 122.9 76 80.3
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 3.3e-26 122.1 76 77.6
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 3.3e-26 122.1 76 77.6
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 4.3e-26 121.7 74 81.1
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 5.7e-26 121.3 116 58.6
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 7.4e-26 120.9 74 81.1
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 9.7e-26 120.6 75 77.3
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 9.7e-26 120.6 76 77.6
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 9.7e-26 120.6 76 78.9
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.3e-25 120.2 75 80.0
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.6e-25 119.8 76 80.3
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 1.6e-25 119.8 74 78.4
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 1.6e-25 119.8 76 78.9
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 2.2e-25 119.4 76 78.9
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 2.2e-25 119.4 74 79.7
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.2e-25 119.4 76 77.6
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 2.8e-25 119.0 75 78.7
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 2.8e-25 119.0 76 77.6
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 2.8e-25 119.0 74 78.4
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 2.8e-25 119.0 76 75.0
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 2.8e-25 119.0 76 77.6
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 3.7e-25 118.6 76 77.6
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 3.7e-25 118.6 76 76.3
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 3.7e-25 118.6 76 75.0
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 4.8e-25 118.2 87 70.1
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 4.8e-25 118.2 76 77.6
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 4.8e-25 118.2 75 76.0
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 6.3e-25 117.9 76 76.3
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 8.2e-25 117.5 76 77.6
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.1e-24 117.1 74 79.7
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 1.4e-24 116.7 77 71.4
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 1.4e-24 116.7 76 76.3
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 1.4e-24 116.7 76 75.0
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.8e-24 116.3 76 76.3
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.8e-24 116.3 74 74.3
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 2.4e-24 115.9 74 78.4
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 2.4e-24 115.9 94 66.0
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 3.1e-24 115.5 74 77.0
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 3.1e-24 115.5 76 73.7
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 4.1e-24 115.2 76 72.4
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 5.3e-24 114.8 75 73.3
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 5.3e-24 114.8 76 75.0
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 6.9e-24 114.4 74 75.7
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 6.9e-24 114.4 76 72.4
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 9.0e-24 114.0 74 75.7
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 9.0e-24 114.0 74 75.7
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 9.0e-24 114.0 74 78.4
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 9.0e-24 114.0 76 73.7
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 1.2e-23 113.6 74 77.0
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 1.2e-23 113.6 76 73.7
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 1.2e-23 113.6 76 73.7
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 1.5e-23 113.2 76 73.7
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 1.5e-23 113.2 88 67.0
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 1.5e-23 113.2 76 72.4
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 2.0e-23 112.8 74 74.3
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 2.0e-23 112.8 75 76.0
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 2.6e-23 112.5 75 73.3
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 2.6e-23 112.5 74 75.7
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 4.5e-23 111.7 77 71.4
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 4.5e-23 111.7 74 75.7
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 1.3e-22 110.2 74 71.6
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 1.3e-22 110.2 75 69.3
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 2.2e-22 109.4 75 74.7
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 2.9e-22 109.0 76 71.1
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 2.5e-21 105.9 74 67.6
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 7.9e-20 100.9 64 73.4
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.0e-19 100.5 77 64.9
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 1.0e-19 100.5 75 64.0
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 6.7e-19 97.8 73 63.0
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 8.8e-19 97.4 75 62.7
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.1e-18 97.1 74 70.3
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 2.8e-17 92.4 74 62.2
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 3.7e-17 92.0 64 71.9
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.8e-16 89.7 76 57.9
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 9.1e-16 87.4 62 74.2
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 2.6e-15 85.9 78 55.1
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 3.8e-14 82.0 75 56.0
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 3.8e-14 82.0 73 60.3
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 3.8e-14 82.0 75 57.3
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 3.9e-11 72.0 77 51.9
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 3.7e-09 65.5 81 48.1
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 1.8e-08 63.2 61 50.8
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 1.5e-07 60.1 38 68.4
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 3.8e-06 55.5 36 77.8


User provided reference genes

Program Settings