Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 6.7e-193 677.2 339 100.0
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 4.7e-138 495.0 332 73.5
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 3.7e-135 485.3 332 73.2
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 6.3e-135 484.6 333 71.5
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 1.4e-134 483.4 333 72.4
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.4e-134 483.4 332 73.2
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 2.4e-134 482.6 333 72.7
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 5.4e-134 481.5 332 72.0
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 3.5e-133 478.8 333 71.5
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 1.0e-132 477.2 333 71.2
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 1.0e-132 477.2 333 71.2
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.7e-132 476.5 333 71.5
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 1.7e-132 476.5 333 72.4
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 1.7e-132 476.5 333 70.3
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 2.3e-132 476.1 332 71.7
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 2.3e-132 476.1 333 69.4
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 2.3e-132 476.1 332 72.3
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 5.0e-132 474.9 333 71.8
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 5.0e-132 474.9 332 71.1
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 8.6e-132 474.2 333 69.7
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 8.6e-132 474.2 332 69.9
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.1e-131 473.8 333 71.5
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 3.3e-131 472.2 333 70.0
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 7.3e-131 471.1 333 70.0
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 1.2e-130 470.3 333 69.4
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 2.1e-130 469.5 332 68.7
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 2.8e-130 469.2 313 73.2
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 6.1e-130 468.0 332 70.2
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 4.0e-129 465.3 333 68.8
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 5.2e-129 464.9 333 68.5
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 6.8e-129 464.5 333 70.0
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 6.8e-129 464.5 333 70.3
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.0e-128 463.0 332 69.3
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 2.6e-128 462.6 332 69.0
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 2.6e-128 462.6 332 69.0
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 9.8e-128 460.7 332 68.7
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.3e-127 460.3 334 70.4
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 1.3e-127 460.3 333 69.1
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 2.2e-127 459.5 332 69.3
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.2e-127 459.5 332 69.3
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 2.9e-127 459.1 333 68.8
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 3.7e-127 458.8 332 68.7
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 3.7e-127 458.8 333 68.8
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 4.9e-127 458.4 332 69.3
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 8.3e-127 457.6 334 68.6
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 3.2e-126 455.7 332 70.8
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 3.2e-126 455.7 332 68.7
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 3.2e-126 455.7 332 68.4
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 4.1e-126 455.3 333 68.5
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 4.1e-126 455.3 331 68.9
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 5.4e-126 454.9 332 70.2
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 9.2e-126 454.1 334 69.5
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 1.2e-125 453.8 332 68.7
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 1.2e-125 453.8 332 68.7
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.0e-125 453.0 332 68.1
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 2.7e-125 452.6 333 67.0
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 4.6e-125 451.8 350 65.7
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 4.6e-125 451.8 330 69.1
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 6.0e-125 451.4 332 68.4
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 6.0e-125 451.4 332 68.1
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 6.0e-125 451.4 332 68.1
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 7.8e-125 451.1 332 67.5
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 7.8e-125 451.1 332 67.5
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 7.8e-125 451.1 334 69.2
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 1.0e-124 450.7 334 68.9
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 2.3e-124 449.5 332 67.8
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 3.0e-124 449.1 332 67.2
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 3.0e-124 449.1 334 69.2
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 3.9e-124 448.7 332 68.1
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 3.9e-124 448.7 328 68.6
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 5.0e-124 448.4 332 67.2
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.5e-123 446.8 377 60.5
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 1.5e-123 446.8 332 67.8
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 3.3e-123 445.7 332 67.8
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 4.3e-123 445.3 332 67.5
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 5.6e-123 444.9 332 67.5
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.6e-122 443.4 332 68.4
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.6e-122 443.4 335 66.9
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 2.1e-122 443.0 333 67.0
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.1e-122 443.0 333 67.3
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.3e-121 439.5 363 62.8
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 6.8e-121 438.0 345 64.9
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.5e-120 436.8 383 60.3
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.2e-119 433.0 334 67.4
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 1.2e-117 427.2 333 64.3
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 1.7e-116 423.3 332 63.6
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 1.9e-115 419.9 313 66.5
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 9.5e-115 417.5 333 61.9
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 1.1e-113 414.1 289 70.6
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 4.0e-113 412.1 332 62.0
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 5.2e-113 411.8 344 62.2
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.2e-104 384.0 332 60.8
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 3.4e-104 382.5 288 67.7
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 8.4e-103 377.9 334 57.5
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 2.5e-99 366.3 335 54.9
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 8.1e-98 361.3 332 55.1
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 4.6e-93 345.5 334 53.3
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 1.6e-74 283.9 353 46.2
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 3.8e-71 272.7 185 71.9
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 4.2e-70 269.2 332 43.7
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 1.9e-67 260.4 402 39.8
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 4.6e-61 239.2 174 69.5
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 1.1e-57 228.0 267 48.3
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 1.3e-55 221.1 322 43.8
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 3.8e-55 219.5 137 76.6
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.7e-42 177.6 136 66.2
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 5.3e-41 172.6 116 73.3
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.1e-38 164.9 116 69.0
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.4e-30 135.2 102 64.7
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.6e-27 127.1 201 39.8
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.3e-20 104.0 68 73.5
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.1e-17 95.1 68 67.6
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.4e-17 94.0 68 70.6
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 4.0e-12 76.6 69 59.4


User provided reference genes

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