Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.6e-124 448.7 231 100.0
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.1e-121 439.1 231 98.7
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 1.2e-87 327.0 231 71.0
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 1.4e-85 320.1 231 72.3
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 3.1e-85 318.9 231 71.9
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 1.2e-84 317.0 232 71.6
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 1.6e-84 316.6 232 71.1
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 2.0e-84 316.2 232 71.6
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 2.3e-83 312.8 231 68.0
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 5.0e-83 311.6 231 67.5
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 4.2e-82 308.5 231 67.5
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 4.2e-82 308.5 231 69.3
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 9.5e-82 307.4 233 67.0
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 9.5e-82 307.4 231 70.1
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 2.1e-81 306.2 231 67.5
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 2.8e-81 305.8 231 66.7
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 2.8e-81 305.8 233 69.1
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 2.8e-81 305.8 232 68.1
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 3.6e-81 305.4 224 69.2
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 8.0e-81 304.3 231 67.5
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.8e-80 303.1 231 68.4
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 2.3e-80 302.8 231 68.4
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 4.0e-80 302.0 231 68.4
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 4.0e-80 302.0 231 68.4
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 6.8e-80 301.2 231 67.5
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 6.8e-80 301.2 231 66.2
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 1.5e-79 300.1 233 69.1
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 2.0e-79 299.7 224 68.3
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 2.0e-79 299.7 233 67.0
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 5.7e-79 298.1 224 67.9
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 1.3e-78 297.0 227 67.0
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 3.7e-78 295.4 232 68.1
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 4.9e-78 295.0 227 68.3
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 6.3e-78 294.7 231 66.7
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 6.3e-78 294.7 232 64.7
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 1.8e-77 293.1 233 67.0
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 1.8e-77 293.1 231 64.5
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 1.8e-77 293.1 231 64.5
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 1.8e-77 293.1 231 64.9
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 4.1e-77 292.0 234 67.5
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 2.7e-76 289.3 227 67.8
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 2.7e-76 289.3 232 65.5
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 4.5e-76 288.5 231 68.0
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 5.9e-76 288.1 232 64.7
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 2.9e-75 285.8 231 63.6
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.1e-74 283.9 233 65.2
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.9e-74 283.1 231 66.7
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 2.8e-73 279.3 231 61.9
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 4.7e-73 278.5 231 62.8
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 6.1e-73 278.1 224 65.2
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 8.0e-73 277.7 231 62.3
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 1.4e-72 276.9 224 66.1
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 1.8e-72 276.6 231 61.9
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 2.3e-72 276.2 231 64.1
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 8.9e-72 274.2 231 60.2
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 1.2e-71 273.9 232 61.2
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 1.2e-71 273.9 231 65.4
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 2.6e-71 272.7 231 60.6
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 2.6e-71 272.7 231 61.5
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 4.4e-71 271.9 231 62.3
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 4.4e-71 271.9 231 59.3
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 5.8e-71 271.6 224 65.2
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 6.4e-70 268.1 224 65.2
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 1.9e-69 266.5 224 61.6
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 2.4e-69 266.2 232 59.9
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 4.1e-69 265.4 231 61.9
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 1.0e-67 260.8 236 61.9
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.0e-67 260.8 281 52.7
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 1.7e-67 260.0 224 61.6
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 3.0e-67 259.2 223 60.1
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 3.9e-67 258.8 235 58.3
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 5.0e-67 258.5 231 60.2
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 6.6e-67 258.1 230 60.4
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 8.6e-67 257.7 231 58.4
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 1.1e-66 257.3 243 59.3
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 2.5e-66 256.1 235 57.9
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 4.3e-66 255.4 231 60.2
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 4.3e-66 255.4 231 60.2
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 3.6e-65 252.3 224 64.3
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 4.7e-65 251.9 224 60.3
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 1.1e-64 250.8 231 56.3
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.8e-64 250.0 236 59.7
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 3.1e-64 249.2 238 58.4
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 5.2e-64 248.4 217 60.4
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 6.8e-64 248.1 212 60.8
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 3.4e-63 245.7 227 58.6
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.3e-62 243.8 231 58.0
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 4.1e-61 238.8 231 54.5
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.2e-60 237.3 231 53.7
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 1.1e-58 230.7 255 51.4
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 6.2e-57 224.9 238 52.1
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 1.4e-56 223.8 257 49.4
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 6.8e-56 221.5 212 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 4.9e-54 215.3 233 50.6
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 4.9e-54 215.3 224 54.0
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 1.9e-53 213.4 236 49.2
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 7.1e-53 211.5 234 48.3
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 2.1e-52 209.9 166 66.9
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 3.5e-52 209.1 241 46.9
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.9e-51 205.7 166 65.1
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 8.6e-51 204.5 228 48.7
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 5.6e-50 201.8 232 52.2
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 7.3e-50 201.4 189 55.6
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 3.6e-49 199.1 229 45.9
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 4.7e-49 198.7 224 50.9
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 8.1e-49 198.0 231 49.4
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 3.8e-46 189.1 159 63.5
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 8.4e-46 188.0 221 50.2
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 8.7e-43 177.9 162 57.4
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 4.0e-32 142.5 108 64.8
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-32 141.7 262 34.7
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 4.2e-29 132.5 92 71.7
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 1.6e-28 130.6 231 37.2
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.3e-27 127.5 194 43.8
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 6.7e-27 125.2 146 53.4
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 2.5e-26 123.2 93 63.4
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.3e-26 122.9 95 63.2
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 1.3e-25 120.9 87 66.7
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 3.1e-24 116.3 274 31.0
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 1.4e-21 107.5 90 58.9
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 1.9e-21 107.1 90 57.8
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 2.5e-21 106.7 198 36.4
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 4.2e-21 105.9 90 57.8
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 6.0e-20 102.1 90 56.7
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 3.9e-19 99.4 74 70.3
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 1.9e-18 97.1 168 40.5
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.9e-18 97.1 168 40.5
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 1.3e-17 94.4 63 71.4
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 2.0e-15 87.0 92 57.6
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 4.9e-14 82.4 77 50.6
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.2e-13 79.3 75 56.0
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 1.8e-11 73.9 60 65.0
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 1.8e-11 73.9 54 70.4
SGA_v2.0_scaffold100G29569 Striga asiatica HOM05D005809 ORTHO05D007259 8.5e-06 55.1 79 45.6


User provided reference genes

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