Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02487 Eucalyptus grandis HOM05D000081 ORTHO05D007129 1.6e-62 242.7 127 100.0
Eucgr.C02545 Eucalyptus grandis HOM05D000081 ORTHO05D007129 6.0e-54 214.2 112 98.2
Eucgr.C02481 Eucalyptus grandis HOM05D000081 ORTHO05D007129 1.0e-53 213.4 112 97.3
Haze_19208 Corylus avellana HOM05D000081 ORTHO05D007129 2.1e-43 179.1 112 83.0
QL02p093197 Quercus lobata HOM05D000081 ORTHO05D007129 6.2e-43 177.6 111 82.0
Glyma.02G203800 Glycine max HOM05D000081 ORTHO05D007129 8.1e-43 177.2 112 82.1
CiPaw.16G111300 Carya illinoinensis HOM05D000081 ORTHO05D007129 1.4e-42 176.4 112 82.1
Duzib168G1343 Durio zibethinus HOM05D000081 ORTHO05D007129 1.4e-42 176.4 112 80.4
Glyma.17G074000 Glycine max HOM05D000081 ORTHO05D007129 1.8e-42 176.0 112 81.2
CANSAT11G0934 Cannabis sativa HOM05D000081 ORTHO05D007129 3.1e-42 175.3 112 80.4
Prupe.7G262600 Prunus persica HOM05D000081 ORTHO05D007129 6.9e-42 174.1 112 78.6
Atru.chr7.53 Acer truncatum HOM05D000081 ORTHO05D007129 1.5e-41 172.9 112 79.5
ClCG06G012400 Citrullus lanatus HOM05D000081 ORTHO05D007129 1.5e-41 172.9 112 79.5
Thecc.09G031100 Theobroma cacao HOM05D000081 ORTHO05D007129 1.5e-41 172.9 112 79.5
Phvul.003G156300 Phaseolus vulgaris HOM05D000081 ORTHO05D007129 2.0e-41 172.6 112 79.5
VMungo1215G1089 Vigna mungo HOM05D000081 ORTHO05D007129 3.4e-41 171.8 112 79.5
TWI32G1130 Tripterygium wilfordii HOM05D000081 ORTHO05D007129 4.5e-41 171.4 112 77.7
Ciclev10008135m.g Citrus clementina HOM05D000081 ORTHO05D007129 2.9e-40 168.7 112 78.6
Lj4g0001781 Lotus japonicus HOM05D000081 ORTHO05D007129 2.9e-40 168.7 112 77.7
Ca_21125_v3 Cicer arietinum L. HOM05D000081 ORTHO05D007129 3.8e-40 168.3 112 78.6
Sabra18G0091200 Salix brachista HOM05D000081 ORTHO05D007129 4.9e-40 167.9 114 78.1
Gohir.A06G097400 Gossypium hirsutum HOM05D000081 ORTHO05D007129 8.4e-40 167.2 112 75.9
Gohir.D06G098100 Gossypium hirsutum HOM05D000081 ORTHO05D007129 8.4e-40 167.2 112 75.9
TPR.G24876 Trifolium pratense HOM05D000081 ORTHO05D007129 8.4e-40 167.2 112 77.7
TWI34G0929 Tripterygium wilfordii HOM05D000081 ORTHO05D007129 1.4e-39 166.4 113 77.0
arahy.Tifrunner.gnm1.ann1.5041YP Arachis hypogaea HOM05D000081 ORTHO05D007129 1.9e-39 166.0 113 77.9
MD02G1007900 Malus domestica HOM05D000081 ORTHO05D007129 1.9e-39 166.0 112 76.8
Gorai.010G113000 Gossypium raimondii HOM05D000081 ORTHO05D007129 2.4e-39 165.6 112 75.0
Potri.018G107000 Populus trichocarpa HOM05D000081 ORTHO05D007129 3.2e-39 165.2 114 77.2
GSVIVG01023600001 Vitis vinifera HOM05D000081 ORTHO05D007129 3.2e-39 165.2 112 75.9
CsaV3_1G028960 Cucumis sativus L. HOM05D000081 ORTHO05D007129 4.2e-39 164.9 113 78.8
Gohir.A07G026900 Gossypium hirsutum HOM05D000081 ORTHO05D007129 5.4e-39 164.5 112 76.8
TWI63G0304 Tripterygium wilfordii HOM05D000081 ORTHO05D007129 9.3e-39 163.7 112 75.0
MELO3C010223.2 Cucumis melo HOM05D000081 ORTHO05D007129 1.2e-38 163.3 113 77.9
Duzib150G1372 Durio zibethinus HOM05D000081 ORTHO05D007129 1.2e-38 163.3 112 75.9
Gohir.D07G030900 Gossypium hirsutum HOM05D000081 ORTHO05D007129 3.5e-38 161.8 112 75.9
Gorai.001G032200 Gossypium raimondii HOM05D000081 ORTHO05D007129 3.5e-38 161.8 112 75.9
Psat4g109320 Pisum sativum HOM05D000081 ORTHO05D007129 3.5e-38 161.8 113 77.0
Sed0002449 Sechium edule HOM05D000081 ORTHO05D007129 6.0e-38 161.0 112 75.9
Dinv41382 Davidia involucrata HOM05D000081 ORTHO05D007129 1.3e-37 159.8 112 73.2
Lj7A458T48 Lonicera japonica HOM05D000081 ORTHO05D007129 1.3e-37 159.8 112 72.3
Manes.14G112740 Manihot esculenta HOM05D000081 ORTHO05D007129 1.3e-37 159.8 114 74.6
COL.COLO4_18806 Corchorus olitorius HOM05D000081 ORTHO05D007129 2.3e-37 159.1 132 65.9
Duzib187G0632 Durio zibethinus HOM05D000081 ORTHO05D007129 3.9e-37 158.3 111 74.8
PGR102G0610 Punica granatum HOM05D000081 ORTHO05D007129 3.9e-37 158.3 112 73.2
Dinv42858 Davidia involucrata HOM05D000081 ORTHO05D007129 1.1e-36 156.8 112 71.4
Dinv43242 Davidia involucrata HOM05D000081 ORTHO05D007129 1.1e-36 156.8 112 71.4
Hma1.2p1_0222F.1_g093530 Hydrangea macrophylla HOM05D000081 ORTHO05D007129 1.1e-36 156.8 112 71.4
Lalb_Chr23g0275691 Lupinus albus HOM05D000081 ORTHO05D007129 1.1e-36 156.8 112 69.6
Potri.006G184800 Populus trichocarpa HOM05D000081 ORTHO05D007129 1.5e-36 156.4 115 74.8
Nitab4.5_0005653g0010 Nicotiana tabacum HOM05D000081 ORTHO05D007129 1.9e-36 156.0 112 70.5
Phvul.009G195200 Phaseolus vulgaris HOM05D000081 ORTHO05D007129 1.9e-36 156.0 112 72.3
Actinidia38324 Actinidia chinensis HOM05D000081 ORTHO05D007129 2.5e-36 155.6 112 71.4
PGSC0003DMG400011186 Solanum tuberosum HOM05D000081 ORTHO05D007129 4.3e-36 154.8 112 69.6
Cc06_g15010 Coffea canephora HOM05D000081 ORTHO05D007129 5.6e-36 154.5 112 72.3
Glyma.06G219800 Glycine max HOM05D000081 ORTHO05D007129 7.4e-36 154.1 112 70.5
Nitab4.5_0001571g0040 Nicotiana tabacum HOM05D000081 ORTHO05D007129 9.6e-36 153.7 112 70.5
Glyma.12G152600 Glycine max HOM05D000081 ORTHO05D007129 1.3e-35 153.3 112 70.5
Lj6g0010249 Lotus japonicus HOM05D000081 ORTHO05D007129 1.3e-35 153.3 112 72.3
Actinidia04298 Actinidia chinensis HOM05D000081 ORTHO05D007129 1.6e-35 152.9 112 70.5
Lalb_Chr08g0234161 Lupinus albus HOM05D000081 ORTHO05D007129 1.6e-35 152.9 120 68.3
Solyc07g005650.4 Solanum lycopersicum HOM05D000081 ORTHO05D007129 3.7e-35 151.8 112 67.9
CSS0035298 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D007129 4.8e-35 151.4 112 72.3
Sopen07g001750 Solanum pennellii HOM05D000081 ORTHO05D007129 2.4e-34 149.1 112 67.9
Rhsim01G0033600 Rhododendron simsii HOM05D000081 ORTHO05D007129 4.0e-34 148.3 113 70.8
RcHm_v2.0_Chr2g0085691 Rosa chinensis HOM05D000081 ORTHO05D007129 4.0e-34 148.3 151 57.6
FvH4_1g00960 Fragaria vesca HOM05D000081 ORTHO05D007129 6.9e-34 147.5 125 64.8
FAN28G0131 Fragaria x ananassa HOM05D000081 ORTHO05D007129 6.9e-34 147.5 125 64.8
FAN23G2601 Fragaria x ananassa HOM05D000081 ORTHO05D007129 9.0e-34 147.1 125 64.8
FAN26G1513 Fragaria x ananassa HOM05D000081 ORTHO05D007129 9.0e-34 147.1 125 64.8
Eucgr.C00348 Eucalyptus grandis HOM05D000081 ORTHO05D007129 2.0e-33 146.0 110 65.5
Peaxi162Scf00401g00087 Petunia axillaris HOM05D000081 ORTHO05D007129 2.0e-33 146.0 112 67.0
arahy.Tifrunner.gnm1.ann1.A6JJY3 Arachis hypogaea HOM05D000081 ORTHO05D007129 4.5e-33 144.8 113 69.9
CSS0019008 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D007129 2.9e-32 142.1 122 64.8
CAN.G160.57 Capsicum annuum HOM05D000081 ORTHO05D007129 8.4e-32 140.6 113 68.1
Aa31LG2G19410 Aethionema arabicum HOM05D000081 ORTHO05D007129 1.8e-29 132.9 112 64.3
AL7G21150 Arabidopsis lyrata HOM05D000081 ORTHO05D007129 3.9e-29 131.7 113 65.5
VMungo1309G0985 Vigna mungo HOM05D000081 ORTHO05D007129 5.1e-29 131.3 108 67.6
CARHR238830 Cardamine hirsuta HOM05D000081 ORTHO05D007129 8.7e-29 130.6 112 61.6
Nn2g12372 Nelumbo nucifera HOM05D000081 ORTHO05D007129 8.7e-29 130.6 113 62.8
Sp7g28810 Schrenkiella parvula HOM05D000081 ORTHO05D007129 1.9e-28 129.4 113 64.6
TAR383G0044 Trochodendron aralioides HOM05D000081 ORTHO05D007129 1.9e-28 129.4 111 62.2
AT4G30935 Arabidopsis thaliana HOM05D000081 ORTHO05D007129 7.4e-28 127.5 113 63.7
Carub.0007s0961 Capsella rubella HOM05D000081 ORTHO05D007129 3.7e-27 125.2 112 59.8
Thhalv10025126m.g Eutrema salsugineum HOM05D000081 ORTHO05D007129 8.2e-27 124.0 113 62.8
THA.LOC104819904 Tarenaya hassleriana HOM05D000081 ORTHO05D007129 1.8e-26 122.9 112 62.5
Oeu012296.1 Olea europaea HOM05D000081 ORTHO05D007129 4.0e-26 121.7 112 58.9
BcaB03g12667 Brassica carinata HOM05D000081 ORTHO05D007129 9.0e-26 120.6 112 59.8
BraA08t33862Z Brassica rapa HOM05D000081 ORTHO05D007129 1.2e-25 120.2 114 60.5
Migut.K00328 Erythranthe guttata HOM05D000081 ORTHO05D007129 1.2e-25 120.2 130 53.8
BcaC01g01130 Brassica carinata HOM05D000081 ORTHO05D007129 2.6e-25 119.0 112 59.8
C03p88430 Brassica napus HOM05D000081 ORTHO05D007129 2.6e-25 119.0 112 59.8
BolC3t21152H Brassica oleracea HOM05D000081 ORTHO05D007129 2.6e-25 119.0 112 59.8
Nn8g39887 Nelumbo nucifera HOM05D000081 ORTHO05D007129 3.4e-25 118.6 111 57.7
A08p19010 Brassica napus HOM05D000081 ORTHO05D007129 5.8e-25 117.9 113 58.4
MSTRG.6136 Avicennia marina HOM05D000081 ORTHO05D007129 2.9e-24 115.5 112 56.2
GSVIVG01035965001 Vitis vinifera HOM05D000081 ORTHO05D007129 1.9e-23 112.8 111 55.0
Medtr4g130900 Medicago truncatula HOM05D000081 ORTHO05D007129 5.5e-23 111.3 111 57.7
PSO561G0055 Papaver somniferum HOM05D000081 ORTHO05D007129 9.3e-23 110.5 110 52.7
Aqoxy7G03408 Aquilegia oxysepala HOM05D000081 ORTHO05D007129 5.1e-21 104.8 113 52.2
MD15G1152100 Malus domestica HOM05D000081 ORTHO05D007129 8.7e-21 104.0 55 90.9
SGA_v2.0_scaffold12G05993 Striga asiatica HOM05D000081 ORTHO05D007129 1.1e-20 103.6 112 54.5
TAR625G1281 Trochodendron aralioides HOM05D000081 ORTHO05D007129 3.3e-20 102.1 97 57.7
Migut.J01340 Erythranthe guttata HOM05D000081 ORTHO05D007129 2.2e-19 99.4 110 48.2
Manes.03G008900 Manihot esculenta HOM05D000081 ORTHO05D007129 6.3e-19 97.8 112 50.9
Manes.16G129500 Manihot esculenta HOM05D000081 ORTHO05D007129 8.2e-19 97.4 113 47.8
TAR626G1338 Trochodendron aralioides HOM05D000081 ORTHO05D007129 8.2e-19 97.4 95 55.8
Ah.16g105050 Amaranthus hybridus HOM05D000081 ORTHO05D007129 3.4e-17 92.0 112 44.6
Potri.006G264000 Populus trichocarpa HOM05D000081 ORTHO05D007129 1.0e-16 90.5 121 43.0
Sc23g0006360 Simmondsia chinensis HOM05D000081 ORTHO05D007129 1.3e-16 90.1 113 46.9
EL10Ac2g04110 Beta vulgaris HOM05D000081 ORTHO05D007129 3.8e-16 88.6 112 46.4
Sabra18G0021700 Salix brachista HOM05D000688 ORTHO05D004737 1.9e-15 86.3 111 45.9
MSTRG.26278 Avicennia marina HOM05D000081 ORTHO05D007129 3.2e-15 85.5 94 50.0
Sabra06G0206400 Salix brachista HOM05D000081 ORTHO05D007129 5.5e-15 84.7 113 46.9
CDE04G0578 Ceratophyllum demersum HOM05D000081 ORTHO05D000036 5.1e-13 78.2 105 44.8
AUR62009363 Chenopodium quinoa HOM05D000081 ORTHO05D007129 8.8e-13 77.4 147 34.7
Oeu050492.2 Olea europaea HOM05D000081 ORTHO05D007129 4.3e-12 75.1 64 54.7
A03p60410 Brassica napus HOM05D000081 ORTHO05D007129 7.4e-12 74.3 83 51.8
BraA03t15081Z Brassica rapa HOM05D000081 ORTHO05D007129 7.4e-12 74.3 83 51.8
BcaNung01553 Brassica carinata HOM05D000081 ORTHO05D007129 9.7e-12 73.9 71 53.5
BcaNung02732 Brassica carinata HOM05D000081 ORTHO05D007129 1.3e-11 73.6 84 51.2
AUR62023044 Chenopodium quinoa HOM05D000081 ORTHO05D007129 3.7e-11 72.0 146 34.9
Oeu039988.2 Olea europaea HOM05D000081 ORTHO05D007129 3.7e-11 72.0 56 60.7
SGA_v2.0_scaffold265G46108 Striga asiatica HOM05D001252 ORTHO05D007129 8.2e-11 70.9 56 60.7
C07p58270 Brassica napus HOM05D003775 ORTHO05D004314 3.1e-10 68.9 84 48.8
BolC7t46286H Brassica oleracea HOM05D002576 ORTHO05D002696 3.1e-10 68.9 84 48.8
Zm00001eb176740 Zea mays HOM05D000081 ORTHO05D000036 1.2e-09 67.0 115 37.4
HanXRQChr03g0064891 Helianthus annuus HOM05D000081 ORTHO05D007129 3.4e-09 65.5 56 53.6
CDE02G3144 Ceratophyllum demersum HOM05D000081 ORTHO05D000036 4.5e-09 65.1 120 36.7
ECA240G1749 Erigeron canadensis HOM05D000081 ORTHO05D007129 1.0e-08 63.9 60 50.0
HanXRQChr09g0244621 Helianthus annuus HOM05D000081 ORTHO05D007129 1.3e-08 63.5 68 47.1
TAR626G0614 Trochodendron aralioides HOM05D060692 ORTHO05D051488 1.1e-07 60.5 57 56.1
Sc06g0009830 Simmondsia chinensis HOM05D000081 ORTHO05D000036 4.2e-07 58.5 84 39.3
Lsat_1_v5_gn_7_49760 Lactuca sativa HOM05D000081 ORTHO05D007129 1.2e-06 57.0 56 51.8


User provided reference genes

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