Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.9e-79 298.5 155 100.0
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 4.0e-36 155.2 136 63.2
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.3e-34 150.2 117 65.0
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 3.8e-34 148.7 122 63.1
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 3.8e-34 148.7 100 76.0
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 3.8e-34 148.7 100 74.0
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 8.4e-34 147.5 104 74.0
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.1e-33 147.1 134 63.4
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.9e-33 146.4 105 70.5
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 2.4e-33 146.0 116 63.8
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 9.3e-33 144.1 114 65.8
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 1.6e-32 143.3 134 62.7
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.7e-32 142.5 134 62.7
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 2.7e-32 142.5 150 56.0
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 4.6e-32 141.7 104 71.2
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 4.6e-32 141.7 104 70.2
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 4.6e-32 141.7 100 75.0
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.0e-31 140.6 100 70.0
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 1.0e-31 140.6 144 58.3
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 1.3e-31 140.2 116 63.8
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 1.8e-31 139.8 100 71.0
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 1.8e-31 139.8 139 56.1
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 3.0e-31 139.0 100 69.0
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 3.9e-31 138.7 150 54.0
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 5.1e-31 138.3 104 68.3
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 8.7e-31 137.5 114 61.4
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 4.3e-30 135.2 150 52.7
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 4.3e-30 135.2 150 52.7
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 5.6e-30 134.8 139 53.2
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 7.4e-30 134.4 100 70.0
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 1.6e-29 133.3 104 64.4
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 6.2e-29 131.3 138 56.5
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 6.2e-29 131.3 147 55.1
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 8.1e-29 131.0 105 64.8
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.1e-28 130.6 100 68.0
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.4e-28 130.2 97 67.0
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 1.8e-28 129.8 100 66.0
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.8e-28 129.8 87 77.0
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 2.4e-28 129.4 117 62.4
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 3.1e-28 129.0 100 66.0
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 4.0e-28 128.6 116 59.5
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 4.0e-28 128.6 98 68.4
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 5.3e-28 128.3 119 55.5
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 9.0e-28 127.5 138 53.6
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 9.0e-28 127.5 115 59.1
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.2e-27 127.1 114 59.6
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.2e-27 127.1 99 65.7
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.5e-27 126.7 99 68.7
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 2.0e-27 126.3 151 51.7
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 2.0e-27 126.3 98 65.3
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.0e-27 126.3 101 65.3
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 2.6e-27 125.9 103 67.0
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 2.6e-27 125.9 101 66.3
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.6e-27 125.9 98 62.2
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 3.4e-27 125.6 140 50.0
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 4.5e-27 125.2 140 49.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 4.5e-27 125.2 114 58.8
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 4.5e-27 125.2 102 65.7
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 5.8e-27 124.8 100 65.0
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 5.8e-27 124.8 85 75.3
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 7.6e-27 124.4 116 57.8
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 7.6e-27 124.4 118 55.1
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 7.6e-27 124.4 116 57.8
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 1.0e-26 124.0 101 65.3
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 1.7e-26 123.2 114 57.9
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.7e-26 123.2 92 68.5
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 1.7e-26 123.2 113 56.6
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.2e-26 122.9 114 57.0
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 2.9e-26 122.5 115 55.7
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 2.9e-26 122.5 98 64.3
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 4.9e-26 121.7 116 56.0
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 6.5e-26 121.3 138 57.2
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 6.5e-26 121.3 92 67.4
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 8.4e-26 120.9 103 62.1
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 8.4e-26 120.9 114 57.0
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 1.1e-25 120.6 86 72.1
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 4.2e-25 118.6 109 56.0
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 7.1e-25 117.9 107 60.7
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 7.1e-25 117.9 102 63.7
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 9.3e-25 117.5 96 62.5
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 9.3e-25 117.5 88 69.3
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.2e-24 117.1 111 60.4
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.2e-24 117.1 146 52.7
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.6e-24 116.7 121 56.2
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 3.5e-24 115.5 101 59.4
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 6.0e-24 114.8 99 58.6
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 6.0e-24 114.8 86 66.3
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 1.0e-23 114.0 103 59.2
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 8.7e-23 110.9 86 62.8
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.9e-22 109.8 72 76.4
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 5.7e-22 108.2 84 67.9
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 7.4e-22 107.8 109 55.0
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.3e-21 107.1 85 63.5
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 1.3e-21 107.1 102 54.9
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 1.6e-21 106.7 100 56.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 2.8e-21 105.9 76 69.7
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.7e-21 105.5 74 75.7
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 4.8e-21 105.1 71 74.6
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 5.0e-18 95.1 90 56.7
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 6.5e-18 94.7 126 41.3
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 1.9e-17 93.2 68 70.6
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 4.2e-17 92.0 66 69.7
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 7.1e-17 91.3 71 67.6
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 3.5e-16 89.0 74 56.8
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.9e-14 83.2 80 53.8
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.3e-13 80.5 57 63.2
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 4.8e-13 78.6 49 75.5
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.7e-10 70.1 53 66.0


User provided reference genes

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