Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 5.7e-93 344.4 187 100.0
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 5.2e-38 161.8 195 53.3
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 1.3e-36 157.1 198 54.5
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 4.9e-36 155.2 137 59.1
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 4.9e-36 155.2 189 56.1
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 1.1e-35 154.1 194 50.5
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 2.4e-35 152.9 190 53.2
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 3.2e-35 152.5 186 51.1
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 4.1e-35 152.1 132 63.6
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 5.4e-35 151.8 133 63.2
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 7.0e-35 151.4 127 65.4
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 9.2e-35 151.0 132 63.6
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 2.0e-34 149.8 196 50.0
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 3.5e-34 149.1 197 50.3
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 4.6e-34 148.7 193 49.2
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 4.6e-34 148.7 197 49.7
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 7.8e-34 147.9 192 50.5
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 7.8e-34 147.9 192 51.0
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 7.8e-34 147.9 174 52.9
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 1.3e-33 147.1 198 51.0
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 1.3e-33 147.1 195 51.3
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 3.0e-33 146.0 157 56.1
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 3.9e-33 145.6 198 50.5
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 3.9e-33 145.6 197 49.7
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 5.0e-33 145.2 205 48.8
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 8.6e-33 144.4 127 63.0
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 8.6e-33 144.4 149 52.3
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.5e-32 143.7 197 48.2
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 1.9e-32 143.3 132 58.3
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 2.5e-32 142.9 132 58.3
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 4.3e-32 142.1 175 49.1
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 5.6e-32 141.7 194 49.0
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 5.6e-32 141.7 126 61.1
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 5.6e-32 141.7 128 62.5
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 7.3e-32 141.4 195 50.8
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 9.5e-32 141.0 130 60.8
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 1.2e-31 140.6 139 56.1
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 1.2e-31 140.6 133 60.2
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.8e-31 139.4 195 48.7
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 3.6e-31 139.0 195 50.3
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 3.6e-31 139.0 195 48.2
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 8.0e-31 137.9 195 48.2
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 1.4e-30 137.1 143 58.0
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 2.3e-30 136.3 111 64.0
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 3.1e-30 136.0 132 56.8
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 3.1e-30 136.0 132 56.1
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 4.0e-30 135.6 167 49.1
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 4.0e-30 135.6 172 49.4
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 4.0e-30 135.6 171 49.7
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 4.0e-30 135.6 180 46.1
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 6.8e-30 134.8 196 47.4
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 1.2e-29 134.0 194 46.4
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 1.2e-29 134.0 183 49.2
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 1.5e-29 133.7 173 49.1
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 1.5e-29 133.7 173 49.1
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 1.5e-29 133.7 203 43.3
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 2.0e-29 133.3 179 46.9
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 2.0e-29 133.3 130 63.8
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 2.6e-29 132.9 127 60.6
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 2.6e-29 132.9 105 64.8
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 3.4e-29 132.5 175 50.3
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 4.4e-29 132.1 131 64.1
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 4.4e-29 132.1 167 49.1
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 4.4e-29 132.1 110 61.8
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 5.8e-29 131.7 105 62.9
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 1.7e-28 130.2 167 46.7
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 2.2e-28 129.8 194 47.4
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 2.9e-28 129.4 201 45.3
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 3.7e-28 129.0 189 47.6
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 4.9e-28 128.6 162 50.6
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 8.3e-28 127.9 129 59.7
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.1e-27 127.5 133 54.9
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 1.1e-27 127.5 144 56.2
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 7.0e-27 124.8 194 47.4
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 4.6e-26 122.1 128 59.4
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 1.3e-25 120.6 134 57.5
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 1.7e-25 120.2 155 53.5
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 3.0e-25 119.4 144 50.0
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 3.0e-25 119.4 179 49.2
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 3.9e-25 119.0 186 42.5
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 3.3e-24 115.9 167 46.7
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 4.3e-24 115.5 128 57.8
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 1.2e-23 114.0 105 57.1
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 2.3e-22 109.8 130 48.5
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 6.8e-22 108.2 147 47.6
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 5.8e-21 105.1 240 39.2
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 2.9e-20 102.8 146 49.3
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 4.3e-16 89.0 54 81.5
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 3.1e-14 82.8 143 42.0
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 8.9e-14 81.3 133 42.9
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 4.4e-13 79.0 56 67.9
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 4.9e-12 75.5 119 42.9
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 3.2e-11 72.8 85 51.8
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 3.2e-11 72.8 83 50.6
Ca_22684_v3 Cicer arietinum L. HOM05D007485 ORTHO05D009437 2.4e-06 56.6 54 63.0
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 3.1e-06 56.2 53 52.8
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 5.2e-06 55.5 147 36.7
Cre16.g687200 Chlamydomonas reinhardtii HOM05D007485 ORTHO05D009437 8.9e-06 54.7 113 38.9


User provided reference genes

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