Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 1.5e-50 203.0 139 100.0
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 1.6e-36 156.4 138 79.0
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 6.2e-36 154.5 137 67.2
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.4e-35 153.3 135 81.5
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.4e-35 153.3 137 64.2
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.1e-35 152.1 137 66.4
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 3.1e-35 152.1 136 83.1
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 4.0e-35 151.8 137 63.5
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 4.0e-35 151.8 138 60.9
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 5.2e-35 151.4 135 85.2
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 6.8e-35 151.0 137 81.8
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 8.9e-35 150.6 138 69.6
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 1.5e-34 149.8 137 61.3
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.5e-34 149.8 137 76.6
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 2.0e-34 149.4 133 80.5
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 4.4e-34 148.3 134 61.2
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 5.8e-34 147.9 138 81.2
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 5.8e-34 147.9 134 72.4
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 9.8e-34 147.1 139 82.7
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.3e-33 146.7 134 60.4
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 2.2e-33 146.0 138 81.2
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.9e-33 145.6 139 79.1
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 8.3e-33 144.1 139 81.3
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 8.3e-33 144.1 139 81.3
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 1.4e-32 143.3 139 57.6
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 1.9e-32 142.9 135 77.8
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 2.4e-32 142.5 136 79.4
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 2.4e-32 142.5 135 63.7
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 2.4e-32 142.5 134 84.3
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 2.4e-32 142.5 135 82.2
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 4.1e-32 141.7 135 64.4
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 7.1e-32 141.0 136 68.4
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 9.2e-32 140.6 138 57.2
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 2.7e-31 139.0 143 55.2
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 2.7e-31 139.0 139 77.7
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 3.5e-31 138.7 131 58.8
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 6.0e-31 137.9 136 58.8
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 7.8e-31 137.5 137 78.8
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 1.7e-30 136.3 136 77.2
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.0e-30 135.6 137 70.1
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 8.6e-30 134.0 139 71.9
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 8.6e-30 134.0 136 72.8
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 8.6e-30 134.0 135 74.8
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 8.6e-30 134.0 141 79.4
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 1.1e-29 133.7 136 68.4
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 1.9e-29 132.9 138 60.9
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 3.3e-29 132.1 138 79.0
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 4.3e-29 131.7 143 72.7
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 5.6e-29 131.3 134 55.2
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 1.2e-28 130.2 137 74.5
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 4.7e-28 128.3 137 76.6
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 4.7e-28 128.3 138 76.8
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.1e-27 127.1 134 55.2
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 1.1e-27 127.1 135 62.2
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 4.0e-27 125.2 143 59.4
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 5.2e-27 124.8 141 70.9
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 6.8e-27 124.4 138 58.7
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 1.2e-26 123.6 132 68.2
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 2.0e-26 122.9 130 53.1
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 2.6e-26 122.5 143 59.4
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 1.3e-25 120.2 142 65.5
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 2.9e-25 119.0 135 73.3
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 4.9e-25 118.2 121 75.2
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.4e-24 116.7 138 58.7
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 1.9e-24 116.3 138 52.9
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 1.9e-24 116.3 136 65.4
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 2.4e-24 115.9 75 84.0
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 3.2e-24 115.5 74 79.7
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 4.1e-24 115.2 134 49.3
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 1.2e-23 113.6 136 65.4
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 2.1e-23 112.8 136 68.4
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 3.5e-23 112.1 135 71.9
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 4.6e-23 111.7 138 72.5
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 6.0e-23 111.3 132 50.8
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 6.0e-23 111.3 119 54.6
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 6.0e-23 111.3 138 52.9
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 1.7e-22 109.8 138 69.6
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 1.7e-22 109.8 138 66.7
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 3.0e-22 109.0 120 57.5
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 3.9e-22 108.6 136 66.9
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 3.9e-22 108.6 141 45.4
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 1.1e-21 107.1 136 66.9
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 1.1e-21 107.1 138 52.9
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 4.3e-21 105.1 75 74.7
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 4.3e-21 105.1 75 74.7
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 5.6e-21 104.8 75 74.7
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 1.6e-20 103.2 75 72.0
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 2.1e-20 102.8 75 72.0
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 2.1e-20 102.8 123 54.5
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 4.7e-20 101.7 138 50.7
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 1.4e-19 100.1 137 50.4
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 1.8e-19 99.8 119 52.1
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 4.0e-19 98.6 141 47.5
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 2.6e-18 95.9 141 63.8
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 1.3e-17 93.6 93 61.3
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 2.9e-17 92.4 127 63.8
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 1.2e-15 87.0 133 42.1
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 1.3e-14 83.6 52 90.4
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 8.7e-14 80.9 138 50.7
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 8.1e-12 74.3 81 85.2
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 4.0e-11 72.0 131 43.5
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 7.6e-10 67.8 60 63.3
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 6.0e-07 58.2 87 70.1
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 1.0e-06 57.4 119 40.3


User provided reference genes

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