Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02308 Eucalyptus grandis HOM05D003020 ORTHO05D003226 1.6e-138 496.1 253 100.0
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 7.5e-40 168.3 278 43.9
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 1.7e-36 157.1 254 44.1
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 1.2e-34 151.0 253 45.1
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 2.1e-34 150.2 253 44.3
Manes.14G153500 Manihot esculenta HOM05D003020 ORTHO05D003226 1.8e-33 147.1 243 44.4
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 5.2e-33 145.6 285 40.4
Eucgr.C00156 Eucalyptus grandis HOM05D003020 ORTHO05D003226 8.9e-33 144.8 251 42.2
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 8.9e-33 144.8 273 40.7
Potri.018G092800 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.4e-30 137.5 237 44.7
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.0e-30 135.2 254 38.6
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 2.0e-29 133.7 237 41.4
Potri.006G168400 Populus trichocarpa HOM05D003020 ORTHO05D003226 4.6e-29 132.5 237 43.5
Manes.14G153400 Manihot esculenta HOM05D003020 ORTHO05D003226 6.0e-29 132.1 222 42.3
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.3e-28 130.2 241 39.0
Sabra18G0080000 Salix brachista HOM05D003020 ORTHO05D003226 3.0e-28 129.8 212 48.1
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 3.9e-28 129.4 222 38.7
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 5.0e-28 129.0 248 40.7
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 5.0e-28 129.0 259 37.8
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 6.6e-28 128.6 259 39.8
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 1.1e-27 127.9 242 40.9
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 1.5e-27 127.5 262 38.5
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 2.5e-27 126.7 270 37.8
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 4.3e-27 125.9 259 37.5
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 4.3e-27 125.9 261 35.6
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 5.6e-27 125.6 239 40.6
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 7.3e-27 125.2 259 37.1
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 9.5e-27 124.8 259 37.1
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.2e-26 124.4 253 40.7
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.2e-26 124.4 248 38.3
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 1.6e-26 124.0 252 37.7
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 1.6e-26 124.0 254 41.3
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 4.7e-26 122.5 242 40.5
FAN22G0428 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.1e-25 121.3 260 34.6
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 1.1e-25 121.3 251 41.0
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.4e-25 120.9 260 34.6
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.4e-25 120.9 277 36.5
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 1.8e-25 120.6 253 37.9
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 8.9e-25 118.2 266 36.8
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 8.9e-25 118.2 248 39.5
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 1.2e-24 117.9 252 36.9
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.2e-24 117.9 243 39.9
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 3.4e-24 116.3 261 39.1
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.8e-24 115.5 264 36.4
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 1.3e-23 114.4 251 36.7
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 2.2e-23 113.6 245 36.3
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 2.2e-23 113.6 245 36.3
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 1.9e-22 110.5 256 38.3
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 2.4e-22 110.2 258 36.4
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 3.2e-22 109.8 272 34.9
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 1.2e-21 107.8 255 38.4
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 1.2e-21 107.8 266 36.8
Lj9C24T7 Lonicera japonica HOM05D003020 ORTHO05D003226 2.1e-21 107.1 254 38.2
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.1e-21 107.1 259 34.0
Ciclev10010819m.g Citrus clementina HOM05D003020 ORTHO05D003226 2.7e-21 106.7 271 37.6
Lj9A26T13 Lonicera japonica HOM05D003020 ORTHO05D003226 7.8e-21 105.1 252 37.3
Sp7g28110 Schrenkiella parvula HOM05D003020 ORTHO05D003226 7.8e-21 105.1 265 35.5
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.0e-20 104.8 281 38.8
Thhalv10026023m.g Eutrema salsugineum HOM05D003020 ORTHO05D003226 1.0e-20 104.8 240 36.7
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 1.0e-20 104.8 251 36.7
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 1.7e-20 104.0 239 36.4
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 3.0e-20 103.2 243 36.2
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 3.9e-20 102.8 215 36.7
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 3.9e-20 102.8 254 37.0
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.1e-20 102.4 258 32.9
Sabra06G0129900 Salix brachista HOM05D003020 ORTHO05D003226 6.6e-20 102.1 189 44.4
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 1.1e-19 101.3 243 35.4
Dinv42724 Davidia involucrata HOM05D003020 ORTHO05D003226 1.5e-19 100.9 250 34.8
Dinv43377 Davidia involucrata HOM05D003020 ORTHO05D003226 1.5e-19 100.9 250 34.8
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 1.5e-19 100.9 239 37.2
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 1.9e-19 100.5 259 34.0
CARHR238140 Cardamine hirsuta HOM05D003020 ORTHO05D003226 4.3e-19 99.4 197 36.0
AT4G30230 Arabidopsis thaliana HOM05D003020 ORTHO05D003226 7.3e-19 98.6 267 34.1
Lj4g0004544 Lotus japonicus HOM05D003020 ORTHO05D003226 7.3e-19 98.6 246 35.0
MBI14_g17368_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 7.3e-19 98.6 225 34.7
A01p07910 Brassica napus HOM05D003020 ORTHO05D003226 2.1e-18 97.1 242 35.5
BraA01t00737Z Brassica rapa HOM05D003020 ORTHO05D003226 2.1e-18 97.1 242 35.5
THA.LOC104803497 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 2.1e-18 97.1 256 33.6
TWI63G1498 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 3.6e-18 96.3 253 35.2
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.6e-18 96.3 242 31.8
BcaC09g51805 Brassica carinata HOM05D003020 ORTHO05D003226 6.2e-18 95.5 246 35.0
C01p08830 Brassica napus HOM05D003020 ORTHO05D003226 6.2e-18 95.5 246 35.0
BolC1t00873H Brassica oleracea HOM05D003020 ORTHO05D003226 6.2e-18 95.5 246 35.0
SalBow6G2220 Salvia bowleyana HOM05D003020 ORTHO05D003226 6.2e-18 95.5 250 37.6
BcaNung03008 Brassica carinata HOM05D003020 ORTHO05D003226 2.4e-17 93.6 246 34.6
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 4.0e-17 92.8 261 34.9
TPR.G5404 Trifolium pratense HOM05D003020 ORTHO05D003226 4.0e-17 92.8 278 33.5
DCAR_017969 Daucus carota HOM05D003020 ORTHO05D003226 6.8e-17 92.0 238 30.7
AL7G21920 Arabidopsis lyrata HOM05D003020 ORTHO05D003226 1.2e-16 91.3 241 34.4
Oeu004196.1 Olea europaea HOM05D003020 ORTHO05D003226 2.0e-16 90.5 241 35.7
Gorai.004G099800 Gossypium raimondii HOM05D003020 ORTHO05D003226 2.6e-16 90.1 150 40.7
DCAR_014702 Daucus carota HOM05D003020 ORTHO05D003226 3.4e-16 89.7 267 32.2
SGA_v2.0_scaffold17G07929 Striga asiatica HOM05D003020 ORTHO05D003226 3.4e-16 89.7 237 33.8
Lsat_1_v5_gn_7_54521 Lactuca sativa HOM05D003020 ORTHO05D003226 4.4e-16 89.4 255 33.7
Lsat_1_v5_gn_5_84881 Lactuca sativa HOM05D003020 ORTHO05D003226 5.8e-16 89.0 254 34.3
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 5.8e-16 89.0 271 32.1
Carub.0007s1038 Capsella rubella HOM05D003020 ORTHO05D003226 3.8e-15 86.3 250 32.8
Lalb_Chr07g0180461 Lupinus albus HOM05D003020 ORTHO05D003226 4.9e-15 85.9 236 33.5
A03p59690 Brassica napus HOM05D003020 ORTHO05D003226 6.4e-15 85.5 265 32.1
BraA03t15021Z Brassica rapa HOM05D003020 ORTHO05D003226 8.4e-15 85.1 269 32.7
ECA234G3857 Erigeron canadensis HOM05D003020 ORTHO05D003226 1.9e-14 84.0 249 32.5
TWI34G0269 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.9e-14 84.0 263 33.5
C07p57710 Brassica napus HOM05D003020 ORTHO05D003226 7.1e-14 82.0 255 32.2
BolC7t46232H Brassica oleracea HOM05D003020 ORTHO05D003226 7.1e-14 82.0 255 32.2
PSO170G3450 Papaver somniferum HOM05D003020 ORTHO05D003226 7.1e-14 82.0 278 30.2
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.6e-13 80.9 262 32.4
THA.LOC104819978 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 2.1e-13 80.5 218 33.5
MSTRG.6214 Avicennia marina HOM05D003020 ORTHO05D003226 6.0e-13 79.0 218 34.9
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.8e-13 78.6 259 30.9
ECA240G3460 Erigeron canadensis HOM05D003020 ORTHO05D003226 1.7e-12 77.4 256 32.0
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 5.1e-12 75.9 259 28.6
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.5e-11 74.3 262 33.6
Aa31LG2G20290 Aethionema arabicum HOM05D003020 ORTHO05D003226 7.3e-11 72.0 214 30.4
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 1.2e-10 71.2 260 28.5
Ciclev10010534m.g Citrus clementina HOM05D003020 ORTHO05D003226 2.1e-10 70.5 268 32.8
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.6e-10 69.7 260 28.1
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 6.2e-10 68.9 247 27.5
AUR62021300 Chenopodium quinoa HOM05D003020 ORTHO05D003226 8.1e-10 68.6 180 35.0
Potri.008G043300 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.1e-09 68.2 259 28.2
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.8e-09 67.4 260 26.9
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 1.8e-09 67.4 233 29.6
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 2.4e-09 67.0 244 29.1
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 3.1e-09 66.6 221 29.4
BcaNung00532 Brassica carinata HOM05D003020 ORTHO05D003226 4.0e-09 66.2 226 31.9
AUR62033218 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.6e-08 63.5 177 33.3
Sabra08G0029900 Salix brachista HOM05D003020 ORTHO05D003226 7.6e-08 62.0 265 26.8
Potri.010G218300 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.7e-07 60.8 255 26.7
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 2.9e-07 60.1 267 25.8
RcHm_v2.0_Chr1g0364021 Rosa chinensis HOM05D003020 ORTHO05D003226 2.9e-07 60.1 267 26.2
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 2.9e-07 60.1 247 25.1
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 8.4e-07 58.5 235 28.9
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 1.1e-06 58.2 112 33.9
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 1.1e-06 58.2 246 30.5
HanXRQChr09g0244991 Helianthus annuus HOM05D003020 ORTHO05D003226 1.4e-06 57.8 159 34.6
ATR0580G303 Amborella trichopoda HOM05D003020 ORTHO05D003226 1.9e-06 57.4 244 28.3
Oeu026427.1 Olea europaea HOM05D011460 ORTHO05D010383 7.1e-06 55.5 263 27.4
Actinidia07721 Actinidia chinensis HOM05D003020 ORTHO05D003226 9.3e-06 55.1 234 28.2
Ah.09g229890 Amaranthus hybridus HOM05D003020 ORTHO05D003226 9.3e-06 55.1 182 30.2


User provided reference genes

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