Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.9e-71 271.2 119 100.0
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.4e-57 225.3 101 95.0
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.5e-56 221.5 101 94.1
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.2e-42 175.6 101 76.2
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.2e-42 175.6 101 76.2
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 2.2e-26 122.5 128 50.0
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 5.5e-25 117.9 104 50.0
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.2e-25 117.5 102 50.0
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 2.7e-24 115.5 101 51.5
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 7.9e-24 114.0 107 44.9
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.3e-23 112.5 104 46.2
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 3.0e-23 112.1 104 48.1
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 3.0e-23 112.1 104 48.1
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 5.1e-23 111.3 104 48.1
Ciclev10010365m.g Citrus clementina HOM05D006945 ORTHO05D005549 6.7e-23 110.9 104 46.2
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-22 110.2 103 48.5
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 3.3e-22 108.6 102 47.1
Ah.05g178690 Amaranthus hybridus HOM05D006945 ORTHO05D005549 2.2e-21 105.9 91 53.8
Eucgr.L01935 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.2e-21 105.9 72 62.5
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 3.7e-21 105.1 130 41.5
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.4e-20 103.2 103 45.6
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 4.1e-20 101.7 131 41.2
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 5.3e-20 101.3 103 45.6
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 5.3e-20 101.3 107 43.0
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.3e-20 101.3 106 48.1
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.2e-19 100.1 96 46.9
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 2.6e-19 99.0 106 45.3
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 4.5e-19 98.2 101 43.6
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 4.5e-19 98.2 105 45.7
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 7.7e-19 97.4 105 44.8
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 7.7e-19 97.4 105 44.8
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-18 97.1 107 43.9
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 1.4e-17 93.2 102 45.1
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 2.5e-17 92.4 96 42.7
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 2.5e-17 92.4 133 37.6
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 5.5e-17 91.3 103 41.7
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 7.2e-17 90.9 108 39.8
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 9.4e-17 90.5 106 42.5
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 9.4e-17 90.5 106 42.5
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 9.4e-17 90.5 82 46.3
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 9.4e-17 90.5 106 42.5
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.2e-16 90.1 101 43.6
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 2.1e-16 89.4 100 42.0
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 2.1e-16 89.4 120 41.7
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 3.6e-16 88.6 120 41.7
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 6.1e-16 87.8 103 41.7
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 6.1e-16 87.8 103 41.7
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 7.9e-16 87.4 96 41.7
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 7.9e-16 87.4 96 41.7
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 7.9e-16 87.4 100 39.0
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-15 87.0 95 44.2
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.3e-15 85.9 132 40.9
Eucgr.L01934 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.0e-15 85.5 70 55.7
EL10Ac6g13469 Beta vulgaris HOM05D006945 ORTHO05D005549 5.1e-15 84.7 88 46.6
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-14 83.6 96 40.6
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.1e-14 83.6 96 42.7
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 1.5e-14 83.2 132 35.6
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 1.5e-14 83.2 132 35.6
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 1.5e-14 83.2 132 35.6
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 2.0e-14 82.8 100 45.0
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 3.3e-14 82.0 132 35.6
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 3.3e-14 82.0 132 35.6
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 3.3e-14 82.0 132 35.6
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 4.3e-14 81.6 132 35.6
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 4.3e-14 81.6 132 35.6
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.3e-14 81.6 99 40.4
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 9.7e-14 80.5 133 36.1
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 9.7e-14 80.5 133 36.1
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 1.3e-13 80.1 92 41.3
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 2.8e-13 79.0 132 34.8
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 3.7e-13 78.6 106 37.7
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 3.7e-13 78.6 106 37.7
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 3.7e-13 78.6 106 37.7
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 1.1e-12 77.0 106 37.7
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.4e-12 76.6 98 36.7
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 3.1e-12 75.5 126 38.1
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.0e-11 72.8 76 43.4
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 3.4e-11 72.0 96 35.4
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 5.9e-11 71.2 106 35.8
Eucgr.C02234 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.9e-11 71.2 75 42.7
Eucgr.C02235 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.9e-11 71.2 75 42.7
Eucgr.C02268 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.9e-11 71.2 75 42.7
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 2.9e-10 68.9 128 33.6
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 6.5e-10 67.8 102 35.3
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 8.5e-10 67.4 68 44.1
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.9e-09 66.2 69 44.9
EL10Ac1g00148 Beta vulgaris HOM05D006945 ORTHO05D005549 3.2e-09 65.5 64 46.9
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 3.2e-09 65.5 100 36.0
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 7.2e-09 64.3 101 32.7
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 9.4e-09 63.9 91 36.3
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.7e-08 62.4 109 34.9
Medtr2g037250 Medicago truncatula HOM05D009822 ORTHO05D011160 4.7e-08 61.6 101 38.6
Thecc.09G180000 Theobroma cacao HOM05D009688 ORTHO05D005549 1.4e-07 60.1 115 34.8
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 5.1e-07 58.2 80 37.5
Gohir.A08G018400 Gossypium hirsutum HOM05D009688 ORTHO05D005549 6.7e-07 57.8 90 36.7
Psat6g103440 Pisum sativum HOM05D009822 ORTHO05D011160 8.8e-07 57.4 101 34.7
Psat1g144880 Pisum sativum HOM05D009822 ORTHO05D011160 2.0e-06 56.2 130 27.7
TPR.G30277 Trifolium pratense HOM05D009822 ORTHO05D011160 3.3e-06 55.5 92 34.8
Gohir.A08G018300 Gossypium hirsutum HOM05D009688 ORTHO05D005549 7.4e-06 54.3 90 35.6


User provided reference genes

Program Settings