Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.0e-62 241.5 108 100.0
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.0e-62 241.5 108 100.0
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.3e-51 204.1 109 80.7
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.2e-50 203.0 109 80.7
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.7e-41 172.6 101 76.2
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 1.3e-28 129.8 106 56.6
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 6.9e-27 124.0 103 51.5
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 7.7e-26 120.6 104 50.0
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-25 120.2 105 50.5
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 2.9e-25 118.6 110 48.2
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 2.9e-25 118.6 110 48.2
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 3.8e-25 118.2 104 47.1
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 8.5e-25 117.1 109 47.7
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 1.1e-24 116.7 110 47.3
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 2.5e-24 115.5 103 53.4
Ciclev10010365m.g Citrus clementina HOM05D006945 ORTHO05D005549 3.2e-24 115.2 105 47.6
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 5.5e-24 114.4 105 46.7
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 5.5e-24 114.4 104 50.0
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 9.4e-24 113.6 103 50.5
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.1e-23 112.5 103 47.6
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.9e-22 108.2 110 49.1
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-21 106.7 107 50.5
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 1.1e-21 106.7 107 50.5
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.6e-21 105.5 103 47.6
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 7.4e-21 104.0 109 48.6
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 7.4e-21 104.0 107 45.8
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 1.7e-20 102.8 108 43.5
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.7e-20 101.7 101 44.6
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 4.8e-20 101.3 107 46.7
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 1.1e-19 100.1 104 47.1
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 1.4e-19 99.8 105 45.7
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 1.4e-19 99.8 105 45.7
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 3.1e-19 98.6 105 45.7
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 3.1e-19 98.6 105 45.7
Eucgr.L01935 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.1e-19 98.6 72 61.1
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 4.1e-19 98.2 105 45.7
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 4.1e-19 98.2 105 45.7
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 4.1e-19 98.2 105 45.7
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 5.3e-19 97.8 95 49.5
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 6.9e-19 97.4 111 48.6
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 6.9e-19 97.4 104 45.2
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 9.1e-19 97.1 105 45.7
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 9.1e-19 97.1 105 45.7
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-18 96.7 105 44.8
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 1.2e-18 96.7 101 48.5
MELO3C003988.2 Cucumis melo HOM05D006945 ORTHO05D005549 1.5e-18 96.3 108 44.4
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 1.5e-18 96.3 101 48.5
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 2.6e-18 95.5 105 44.8
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 3.4e-18 95.1 101 43.6
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.4e-18 95.1 106 43.4
CsaV3_2G008640 Cucumis sativus L. HOM05D006945 ORTHO05D005549 5.9e-18 94.4 108 42.6
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.3e-17 93.2 102 46.1
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.9e-17 92.0 105 47.6
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 3.8e-17 91.7 101 40.6
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 8.5e-17 90.5 106 45.3
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 5.5e-16 87.8 101 40.6
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 5.5e-16 87.8 101 40.6
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 9.4e-16 87.0 101 45.5
Ah.05g178690 Amaranthus hybridus HOM05D006945 ORTHO05D005549 1.2e-15 86.7 95 49.5
TPR.G38489 Trifolium pratense HOM05D014986 ORTHO05D014232 1.6e-15 86.3 116 43.1
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 2.1e-15 85.9 104 39.4
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.7e-15 85.5 96 40.6
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 3.6e-15 85.1 101 38.6
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 3.6e-15 85.1 104 40.4
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 3.6e-15 85.1 104 40.4
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 6.1e-15 84.3 109 42.2
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 1.8e-14 82.8 101 38.6
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 1.5e-13 79.7 102 46.1
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 2.6e-13 79.0 103 42.7
Eucgr.L01934 Eucalyptus grandis HOM05D006945 ORTHO05D005549 7.4e-13 77.4 70 52.9
EL10Ac6g13469 Beta vulgaris HOM05D006945 ORTHO05D005549 4.8e-12 74.7 87 46.0
Eucgr.C02234 Eucalyptus grandis HOM05D006945 ORTHO05D005549 4.8e-12 74.7 46 58.7
Eucgr.C02235 Eucalyptus grandis HOM05D006945 ORTHO05D005549 4.8e-12 74.7 46 58.7
Eucgr.C02268 Eucalyptus grandis HOM05D006945 ORTHO05D005549 4.8e-12 74.7 46 58.7
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 5.3e-11 71.2 101 36.6
Prupe.1G079900 Prunus persica HOM05D009688 ORTHO05D005549 1.2e-10 70.1 114 37.7
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.6e-10 69.7 69 42.0
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.3e-09 66.6 116 36.2
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.3e-09 66.6 87 36.8
Medtr2g037250 Medicago truncatula HOM05D009822 ORTHO05D011160 6.5e-09 64.3 108 35.2
TPR.G30277 Trifolium pratense HOM05D009822 ORTHO05D011160 2.5e-08 62.4 109 35.8
Medtr2g037380 Medicago truncatula HOM05D009822 ORTHO05D011160 6.1e-07 57.8 110 39.1
Gohir.A08G018300 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.8e-06 56.2 109 34.9
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.8e-06 56.2 87 36.8
Glyma.15G164300 Glycine max HOM05D014986 ORTHO05D014232 3.0e-06 55.5 58 48.3
Prupe.1G078000 Prunus persica HOM05D006945 ORTHO05D005549 3.0e-06 55.5 78 33.3
THA.LOC104803953 Tarenaya hassleriana HOM05D006945 ORTHO05D005549 3.0e-06 55.5 48 47.9
Thecc.09G180000 Theobroma cacao HOM05D009688 ORTHO05D005549 3.0e-06 55.5 111 35.1
EL10Ac1g00148 Beta vulgaris HOM05D006945 ORTHO05D005549 4.0e-06 55.1 64 43.8
Psat1g144880 Pisum sativum HOM05D009822 ORTHO05D011160 8.8e-06 53.9 107 34.6


User provided reference genes

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