Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 2.0e-265 918.7 507 100.0
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 8.7e-72 275.4 504 41.5
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 1.4e-66 258.1 586 37.4
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 5.7e-63 246.1 559 38.1
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 5.5e-58 229.6 526 36.9
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 3.6e-57 226.9 524 38.4
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 1.0e-56 225.3 494 39.3
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 2.0e-55 221.1 505 37.4
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 2.6e-55 220.7 510 37.8
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 7.4e-55 219.2 518 36.7
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 7.4e-55 219.2 507 39.6
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 1.8e-53 214.5 479 41.1
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 3.1e-53 213.8 498 39.8
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 9.1e-53 212.2 520 35.2
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 9.1e-53 212.2 544 37.5
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 4.5e-52 209.9 481 38.5
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.5e-52 209.9 491 35.8
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 5.9e-52 209.5 479 38.6
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 2.9e-51 207.2 490 36.1
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 5.0e-51 206.5 488 39.5
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 6.5e-51 206.1 481 37.4
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 6.5e-51 206.1 490 36.1
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 3.2e-50 203.8 487 39.0
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 4.2e-50 203.4 588 34.9
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 1.2e-49 201.8 487 39.0
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 3.6e-49 200.3 480 38.1
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 6.1e-49 199.5 494 37.4
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 1.4e-48 198.4 469 36.7
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.1e-47 195.3 465 36.8
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 3.3e-47 193.7 438 37.4
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 4.4e-47 193.4 482 35.1
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 4.4e-47 193.4 470 35.3
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.3e-46 191.8 516 35.7
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 8.2e-46 189.1 461 36.7
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.8e-45 188.0 381 40.2
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 2.4e-45 187.6 468 37.4
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.2e-44 185.3 497 36.6
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 4.5e-44 183.3 467 38.1
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 7.7e-44 182.6 468 35.5
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.3e-43 181.8 469 35.4
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.3e-43 181.8 505 37.2
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 2.2e-43 181.0 466 37.6
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 2.2e-43 181.0 500 34.4
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 2.2e-43 181.0 466 38.0
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 6.5e-43 179.5 515 33.8
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 8.5e-43 179.1 212 53.8
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.2e-41 175.3 515 33.4
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 1.2e-41 175.3 605 30.7
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.6e-41 174.9 545 32.5
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 4.7e-41 173.3 470 35.3
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.0e-40 172.2 376 38.6
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 1.4e-40 171.8 463 35.6
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 3.0e-40 170.6 340 38.2
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 5.2e-40 169.9 469 33.0
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 5.2e-40 169.9 467 34.9
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 5.2e-40 169.9 370 37.3
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 8.8e-40 169.1 192 53.6
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 2.0e-39 167.9 485 36.1
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 5.7e-39 166.4 468 35.5
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 5.7e-39 166.4 479 37.8
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 7.5e-39 166.0 465 36.8
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 7.5e-39 166.0 440 35.0
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 9.8e-39 165.6 475 32.8
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.7e-38 164.9 505 33.5
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 3.7e-38 163.7 482 32.4
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 8.3e-38 162.5 369 37.7
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 9.1e-37 159.1 485 31.5
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 3.5e-36 157.1 481 35.3
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 3.5e-36 157.1 466 37.3
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 5.9e-36 156.4 107 73.8
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 5.9e-36 156.4 456 33.6
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 7.7e-36 156.0 460 38.0
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 1.3e-35 155.2 467 33.0
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.3e-35 155.2 126 65.1
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 1.3e-35 155.2 464 37.1
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 5.0e-35 153.3 439 32.1
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 6.5e-35 152.9 220 47.3
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.5e-34 151.8 178 52.2
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 5.5e-34 149.8 518 34.9
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 9.4e-34 149.1 114 65.8
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 9.4e-34 149.1 87 79.3
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.2e-33 148.7 595 30.1
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 4.7e-33 146.7 486 31.7
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 6.1e-33 146.4 477 32.3
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 6.1e-33 146.4 109 67.9
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 1.0e-32 145.6 478 33.7
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 1.4e-32 145.2 484 34.9
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.8e-32 144.8 535 30.5
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 2.3e-32 144.4 438 34.2
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 6.8e-32 142.9 121 65.3
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 5.7e-31 139.8 126 58.7
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 5.7e-31 139.8 126 58.7
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 5.7e-31 139.8 126 58.7
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 7.5e-31 139.4 478 32.0
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.7e-30 138.3 124 61.3
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.7e-30 138.3 124 61.3
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.4e-29 135.2 485 29.7
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 9.2e-29 132.5 466 34.1
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 2.0e-28 131.3 476 30.0
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 4.5e-28 130.2 188 44.7
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 7.7e-28 129.4 221 42.1
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.3e-27 128.6 106 61.3
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 2.9e-27 127.5 478 32.4
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 2.9e-27 127.5 478 32.4
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 2.9e-27 127.5 478 32.4
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 3.8e-27 127.1 122 54.9
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 2.5e-26 124.4 477 32.1
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 2.5e-26 124.4 501 27.9
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 9.5e-26 122.5 87 69.0
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 1.2e-25 122.1 99 64.6
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 1.6e-25 121.7 496 31.2
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 2.8e-25 120.9 377 33.2
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 3.6e-25 120.6 479 32.6
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 1.8e-24 118.2 483 28.8
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 8.9e-24 115.9 481 29.5
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 3.7e-22 110.5 183 43.7
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 4.9e-22 110.2 99 59.6
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 4.9e-22 110.2 122 52.5
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 1.1e-21 109.0 435 29.0
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-21 107.8 73 69.9
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 4.1e-21 107.1 221 40.3
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 7.0e-21 106.3 412 30.6
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 3.5e-20 104.0 60 81.7
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 4.4e-15 87.0 483 28.4
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 4.4e-15 87.0 97 58.8
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 3.2e-13 80.9 425 27.5
Cpa.g.c33129.1 Carica papaya HOM05D005890 ORTHO05D006717 5.4e-13 80.1 122 47.5
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 4.6e-12 77.0 55 67.3
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 6.6e-11 73.2 380 29.5
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 1.9e-10 71.6 82 54.9
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.4e-08 65.5 34 88.2
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.4e-08 65.5 34 88.2
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 2.0e-07 61.6 165 36.4


User provided reference genes

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