Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02193 Eucalyptus grandis HOM05D006926 ORTHO05D008863 5.0e-116 422.9 748 100.0
QL06p009008 Quercus lobata HOM05D006926 ORTHO05D008863 3.1e-41 174.5 149 61.7
Atru.chr4.2848 Acer truncatum HOM05D006926 ORTHO05D008863 1.2e-40 172.6 149 60.4
Gohir.A09G238600 Gossypium hirsutum HOM05D006926 ORTHO05D008863 7.6e-40 169.9 149 57.0
Manes.03G195800 Manihot esculenta HOM05D006926 ORTHO05D008863 7.6e-40 169.9 149 60.4
Haze_01195 Corylus avellana HOM05D006926 ORTHO05D008863 1.0e-39 169.5 149 58.4
Gohir.D09G239500 Gossypium hirsutum HOM05D006926 ORTHO05D008863 1.3e-39 169.1 149 57.0
Gorai.006G262300 Gossypium raimondii HOM05D006926 ORTHO05D008863 1.3e-39 169.1 149 57.0
Rhsim04G0222900 Rhododendron simsii HOM05D006926 ORTHO05D008863 2.2e-39 168.3 149 58.4
Cfa015391 Carpinus fangiana HOM05D006926 ORTHO05D008863 2.9e-39 167.9 149 57.7
Duzib151G0724 Durio zibethinus HOM05D006926 ORTHO05D008863 3.8e-39 167.5 149 57.7
Nitab4.5_0005852g0010 Nicotiana tabacum HOM05D006926 ORTHO05D008863 4.9e-39 167.2 149 59.7
CSS0040550 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 8.4e-39 166.4 148 58.1
PGR031G3585 Punica granatum HOM05D006926 ORTHO05D008863 1.1e-38 166.0 149 57.0
PGSC0003DMG400006295 Solanum tuberosum HOM05D006926 ORTHO05D008863 2.5e-38 164.9 149 59.1
Peaxi162Scf01123g00213 Petunia axillaris HOM05D006926 ORTHO05D008863 3.2e-38 164.5 149 59.7
CSS0048032 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 4.2e-38 164.1 147 59.2
Nitab4.5_0000059g0440 Nicotiana tabacum HOM05D006926 ORTHO05D008863 5.5e-38 163.7 149 59.1
Thecc.04G285300 Theobroma cacao HOM05D006926 ORTHO05D008863 7.1e-38 163.3 148 56.8
Prupe.1G135500 Prunus persica HOM05D006926 ORTHO05D008863 1.2e-37 162.5 148 57.4
vmacro08158 Vaccinium macrocarpon HOM05D006926 ORTHO05D008863 1.2e-37 162.5 149 55.7
Psat2g008440 Pisum sativum HOM05D006926 ORTHO05D008863 6.0e-37 160.2 149 54.4
Solyc01g080720.4 Solanum lycopersicum HOM05D006926 ORTHO05D008863 6.0e-37 160.2 148 58.1
Lj9C380T3 Lonicera japonica HOM05D006926 ORTHO05D008863 7.9e-37 159.8 149 56.4
MD08G1066700 Malus domestica HOM05D006926 ORTHO05D008863 7.9e-37 159.8 149 55.0
TWI09G0560 Tripterygium wilfordii HOM05D006926 ORTHO05D008863 7.9e-37 159.8 149 55.0
FvH4_4g18230 Fragaria vesca HOM05D006926 ORTHO05D008863 1.0e-36 159.5 149 54.4
FAN12G2558 Fragaria x ananassa HOM05D006926 ORTHO05D008863 1.0e-36 159.5 149 54.4
FAN12G4333 Fragaria x ananassa HOM05D006926 ORTHO05D008863 1.0e-36 159.5 149 54.4
Sabra10G0009000 Salix brachista HOM05D006926 ORTHO05D008863 1.3e-36 159.1 149 57.7
Medtr5g095130 Medicago truncatula HOM05D006926 ORTHO05D008863 1.8e-36 158.7 149 55.0
THA.LOC104818923 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 2.3e-36 158.3 149 55.0
FAN17G0573 Fragaria x ananassa HOM05D006926 ORTHO05D008863 5.1e-36 157.1 149 53.0
CAN.G185.37 Capsicum annuum HOM05D006926 ORTHO05D008863 8.7e-36 156.4 149 57.0
COL.COLO4_13863 Corchorus olitorius HOM05D006926 ORTHO05D008863 8.7e-36 156.4 149 55.0
TAR365G0466 Trochodendron aralioides HOM05D006926 ORTHO05D008863 8.7e-36 156.4 149 57.0
HanXRQChr05g0150001 Helianthus annuus HOM05D006926 ORTHO05D008863 1.5e-35 155.6 149 51.7
Cc01_g06580 Coffea canephora HOM05D006926 ORTHO05D008863 1.9e-35 155.2 149 56.4
ECA233G5048 Erigeron canadensis HOM05D006926 ORTHO05D008863 4.3e-35 154.1 149 52.3
Hund12224 Selenicereus undatus HOM05D006926 ORTHO05D008863 4.3e-35 154.1 149 54.4
RcHm_v2.0_Chr4g0422371 Rosa chinensis HOM05D006926 ORTHO05D008863 5.7e-35 153.7 148 52.7
Cpa.g.sc16.177 Carica papaya HOM05D006926 ORTHO05D008863 7.4e-35 153.3 147 55.8
Potri.010G014100 Populus trichocarpa HOM05D006926 ORTHO05D008863 7.4e-35 153.3 149 56.4
ClCG05G006130 Citrullus lanatus HOM05D006926 ORTHO05D008863 9.7e-35 152.9 149 57.0
arahy.Tifrunner.gnm1.ann1.R7Y0VJ Arachis hypogaea HOM05D006926 ORTHO05D008863 1.3e-34 152.5 142 56.3
Cc00_g07570 Coffea canephora HOM05D006926 ORTHO05D008863 1.3e-34 152.5 149 55.7
DCAR_006643 Daucus carota HOM05D006926 ORTHO05D008863 1.6e-34 152.1 148 52.7
Actinidia40273 Actinidia chinensis HOM05D006926 ORTHO05D008863 2.2e-34 151.8 134 59.0
CANSAT78G1021 Cannabis sativa HOM05D006926 ORTHO05D008863 3.7e-34 151.0 148 53.4
Oeu029705.1 Olea europaea HOM05D006926 ORTHO05D008863 6.3e-34 150.2 152 52.0
AUR62035127 Chenopodium quinoa HOM05D006926 ORTHO05D008863 1.4e-33 149.1 149 51.0
Sed0000576 Sechium edule HOM05D006926 ORTHO05D008863 3.1e-33 147.9 140 57.1
AUR62040613 Chenopodium quinoa HOM05D006926 ORTHO05D008863 5.3e-33 147.1 149 50.3
MSTRG.10097 Avicennia marina HOM05D006926 ORTHO05D008863 6.9e-33 146.7 152 52.6
Sc10g0006430 Simmondsia chinensis HOM05D006926 ORTHO05D008863 6.9e-33 146.7 149 51.7
Thhalv10020026m.g Eutrema salsugineum HOM05D006926 ORTHO05D008863 1.2e-32 146.0 145 52.4
VMungo0647G0525 Vigna mungo HOM05D006926 ORTHO05D008863 1.2e-32 146.0 146 52.7
AT3G06920 Arabidopsis thaliana HOM05D006926 ORTHO05D008863 2.6e-32 144.8 145 51.0
Lalb_Chr17g0348851 Lupinus albus HOM05D006926 ORTHO05D008863 3.4e-32 144.4 142 52.8
arahy.Tifrunner.gnm1.ann1.DI2NU4 Arachis hypogaea HOM05D006926 ORTHO05D008863 4.5e-32 144.1 136 55.9
EL10Ac1g01925 Beta vulgaris HOM05D006926 ORTHO05D008863 4.5e-32 144.1 147 49.0
CARHR081530 Cardamine hirsuta HOM05D006926 ORTHO05D008863 4.5e-32 144.1 145 52.4
TPR.G14143 Trifolium pratense HOM05D006926 ORTHO05D008863 7.6e-32 143.3 149 50.3
AL3G18040 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.7e-31 142.1 145 51.0
AL3G18070 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.7e-31 142.1 145 51.0
AL3G18090 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.7e-31 142.1 145 51.0
MBI01_g30450_MAGBIO Magnolia biondii HOM05D006926 ORTHO05D008863 1.7e-31 142.1 142 52.8
SalBow1G7679 Salvia bowleyana HOM05D006926 ORTHO05D008863 3.8e-31 141.0 152 50.0
Ah.00g000960 Amaranthus hybridus HOM05D006926 ORTHO05D008863 5.0e-31 140.6 149 49.0
TPR.G14145 Trifolium pratense HOM05D006926 ORTHO05D008863 8.5e-31 139.8 149 49.7
THA.LOC104827343 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 1.4e-30 139.0 142 52.8
A03p34960 Brassica napus HOM05D006926 ORTHO05D008863 1.9e-30 138.7 150 48.7
CsaV3_3G014680 Cucumis sativus L. HOM05D006926 ORTHO05D008863 2.5e-30 138.3 134 56.7
Nn6g34671 Nelumbo nucifera HOM05D006926 ORTHO05D008863 3.2e-30 137.9 148 49.3
Aqoxy5G00729 Aquilegia oxysepala HOM05D004412 ORTHO05D005316 4.2e-30 137.5 151 47.7
BraA03t12676Z Brassica rapa HOM05D006926 ORTHO05D008863 7.2e-30 136.7 150 48.0
C03p42540 Brassica napus HOM05D006926 ORTHO05D008863 9.4e-30 136.3 151 47.7
AL159U10010 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.6e-29 135.6 145 49.7
Nn1g09562 Nelumbo nucifera HOM05D006926 ORTHO05D008863 1.6e-29 135.6 147 49.0
Sp3g05870 Schrenkiella parvula HOM05D006926 ORTHO05D008863 3.6e-29 134.4 134 52.2
Aa31LG5G17490 Aethionema arabicum HOM05D006926 ORTHO05D008863 4.6e-29 134.0 133 51.9
Migut.G00155 Erythranthe guttata HOM05D006926 ORTHO05D008863 7.9e-29 133.3 152 48.7
Sopen01g030780 Solanum pennellii HOM05D006926 ORTHO05D008863 1.8e-28 132.1 130 54.6
SHI00269 Sapria himalayana HOM05D006926 ORTHO05D008863 2.3e-28 131.7 150 48.7
BolC3t16524H Brassica oleracea HOM05D006926 ORTHO05D008863 1.1e-27 129.4 135 48.1
PSO302G0177 Papaver somniferum HOM05D006926 ORTHO05D008863 1.1e-27 129.4 147 50.3
Nn2g14325 Nelumbo nucifera HOM05D006926 ORTHO05D008863 4.3e-27 127.5 149 45.0
Eucgr.B01739 Eucalyptus grandis HOM05D006926 ORTHO05D008863 1.5e-24 119.0 73 82.2
LjContig00081g0009495 Lotus japonicus HOM05D006926 ORTHO05D008863 4.5e-24 117.5 108 54.6
CiPaw.01G148200 Carya illinoinensis HOM05D006926 ORTHO05D008863 1.0e-23 116.3 86 61.6
Ca_06384_v3 Cicer arietinum L. HOM05D006926 ORTHO05D008863 2.2e-23 115.2 117 51.3
Ca_29965_v3 Cicer arietinum L. HOM05D006926 ORTHO05D008863 2.2e-23 115.2 117 51.3
Lalb_Chr10g0107371 Lupinus albus HOM05D006926 ORTHO05D008863 3.6e-21 107.8 115 47.0
Glyma.02G298900 Glycine max HOM05D006926 ORTHO05D008863 6.1e-21 107.1 107 51.4
CDE01G0787 Ceratophyllum demersum HOM05D006926 ORTHO05D008863 1.4e-20 105.9 135 43.7
CDE11G0294 Ceratophyllum demersum HOM05D006926 ORTHO05D008863 1.3e-18 99.4 130 39.2
Dinv26449 Davidia involucrata HOM05D006926 ORTHO05D008863 1.3e-18 99.4 89 61.8
Phvul.008G277600 Phaseolus vulgaris HOM05D006926 ORTHO05D008863 2.2e-18 98.6 86 51.2
SGA_v2.0_scaffold67G22630 Striga asiatica HOM05D006926 ORTHO05D008863 2.2e-15 88.6 152 38.2
Ciclev10007037m.g Citrus clementina HOM05D006926 ORTHO05D008863 5.0e-15 87.4 50 84.0
GSVIVG01017733001 Vitis vinifera HOM05D006926 ORTHO05D008863 5.0e-15 87.4 51 86.3
ATR0796G196 Amborella trichopoda HOM05D006926 ORTHO05D008863 3.2e-14 84.7 115 39.1
TAR365G0845 Trochodendron aralioides HOM05D006926 ORTHO05D008863 9.4e-14 83.2 47 87.2
Carub.0003s0644 Capsella rubella HOM05D006926 ORTHO05D008863 8.0e-13 80.1 51 74.5
Lsat_1_v5_gn_8_31281 Lactuca sativa HOM05D006926 ORTHO05D008863 4.8e-10 70.9 48 68.8
Zm00001eb304410 Zea mays HOM05D006926 ORTHO05D008863 6.3e-10 70.5 46 71.7
Os07g0249100 Oryza sativa ssp. japonica HOM05D006926 ORTHO05D008863 1.8e-09 68.9 44 75.0
HPP92_015997 Vanilla planifolia HOM05D006926 ORTHO05D008863 4.5e-08 64.3 117 34.2
Sed0021384 Sechium edule HOM05D006926 ORTHO05D008863 1.1e-06 59.7 46 60.9
TAR624G0614 Trochodendron aralioides HOM05D005337 ORTHO05D006567 3.2e-06 58.2 131 31.3
Lsat_1_v5_gn_4_106880 Lactuca sativa HOM05D004079 ORTHO05D005437 4.2e-06 57.8 84 28.6
TAR624G0918 Trochodendron aralioides HOM05D005337 ORTHO05D006567 4.2e-06 57.8 131 30.5
PSO832G1391 Papaver somniferum HOM05D004079 ORTHO05D005437 9.4e-06 56.6 78 33.3
SGA_v2.0_scaffold56G20067 Striga asiatica HOM05D004079 ORTHO05D005437 9.4e-06 56.6 86 32.6


User provided reference genes

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