Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02102 Eucalyptus grandis HOM05D005678 ORTHO05D006894 1.0e-77 293.9 223 100.0
vmacro00604 Vaccinium macrocarpon HOM05D005678 ORTHO05D006894 1.6e-38 163.7 106 72.6
CiPaw.08G018100 Carya illinoinensis HOM05D005678 ORTHO05D006894 1.4e-37 160.6 89 85.4
GSVIVG01035539001 Vitis vinifera HOM05D005678 ORTHO05D006894 1.4e-37 160.6 87 86.2
THA.LOC104801628 Tarenaya hassleriana HOM05D005678 ORTHO05D006894 5.2e-37 158.7 105 74.3
Thecc.09G005500 Theobroma cacao HOM05D005678 ORTHO05D006894 6.9e-37 158.3 105 73.3
Actinidia03578 Actinidia chinensis HOM05D005678 ORTHO05D006894 1.2e-36 157.5 86 83.7
Dinv16205 Davidia involucrata HOM05D005678 ORTHO05D006894 1.2e-36 157.5 105 75.2
Manes.03G002700 Manihot esculenta HOM05D005678 ORTHO05D006894 3.4e-36 156.0 103 73.8
CiPaw.07G214300 Carya illinoinensis HOM05D005678 ORTHO05D006894 4.4e-36 155.6 89 79.8
Ciclev10009502m.g Citrus clementina HOM05D005678 ORTHO05D006894 2.9e-35 152.9 98 75.5
Duzib187G0563 Durio zibethinus HOM05D005678 ORTHO05D006894 3.8e-35 152.5 105 70.5
Gohir.A05G065600 Gossypium hirsutum HOM05D005678 ORTHO05D006894 4.9e-35 152.1 105 70.5
Hma1.2p1_0102F.1_g049830 Hydrangea macrophylla HOM05D005678 ORTHO05D006894 4.9e-35 152.1 85 80.0
TAR383G0152 Trochodendron aralioides HOM05D005678 ORTHO05D006894 6.4e-35 151.8 99 71.7
Cc08_g14330 Coffea canephora HOM05D005678 ORTHO05D006894 1.9e-34 150.2 108 66.7
THA.LOC104803592 Tarenaya hassleriana HOM05D005678 ORTHO05D006894 1.9e-34 150.2 105 68.6
QL12p024739 Quercus lobata HOM05D005678 ORTHO05D006894 3.2e-34 149.4 104 71.2
Nitab4.5_0001356g0020 Nicotiana tabacum HOM05D005678 ORTHO05D006894 4.2e-34 149.1 94 75.5
Sc09g0007960 Simmondsia chinensis HOM05D005678 ORTHO05D006894 4.2e-34 149.1 85 82.4
ClCG08G012760 Citrullus lanatus HOM05D005678 ORTHO05D006894 7.1e-34 148.3 111 68.5
Gohir.D05G068200 Gossypium hirsutum HOM05D005678 ORTHO05D006894 7.1e-34 148.3 105 69.5
Gorai.009G069000 Gossypium raimondii HOM05D005678 ORTHO05D006894 7.1e-34 148.3 105 69.5
Nitab4.5_0008905g0030 Nicotiana tabacum HOM05D005678 ORTHO05D006894 9.3e-34 147.9 98 72.4
Potri.018G004901 Populus trichocarpa HOM05D005678 ORTHO05D006894 9.3e-34 147.9 104 68.3
Prupe.1G462000 Prunus persica HOM05D005678 ORTHO05D006894 9.3e-34 147.9 89 77.5
CANSAT25G2809 Cannabis sativa HOM05D005678 ORTHO05D006894 1.2e-33 147.5 90 75.6
MELO3C011199.2 Cucumis melo HOM05D005678 ORTHO05D006894 1.6e-33 147.1 92 75.0
CsaV3_2G031490 Cucumis sativus L. HOM05D005678 ORTHO05D006894 2.1e-33 146.7 92 75.0
Lj5g0006596 Lotus japonicus HOM05D005678 ORTHO05D006894 3.5e-33 146.0 106 66.0
Aa31LG2G19000 Aethionema arabicum HOM05D005678 ORTHO05D006894 4.6e-33 145.6 89 74.2
CARHR117620 Cardamine hirsuta HOM05D005678 ORTHO05D006894 4.6e-33 145.6 86 76.7
BcaC09g51917 Brassica carinata HOM05D005678 ORTHO05D006894 6.0e-33 145.2 99 68.7
C01p07670 Brassica napus HOM05D005678 ORTHO05D006894 6.0e-33 145.2 99 68.7
BolC1t00747H Brassica oleracea HOM05D005678 ORTHO05D006894 6.0e-33 145.2 99 68.7
ECA246G1984 Erigeron canadensis HOM05D005678 ORTHO05D006894 7.8e-33 144.8 98 71.4
Oeu009186.1 Olea europaea HOM05D005678 ORTHO05D006894 7.8e-33 144.8 97 72.2
Sed0002806 Sechium edule HOM05D005678 ORTHO05D006894 7.8e-33 144.8 110 67.3
Carub.0007s0920 Capsella rubella HOM05D005678 ORTHO05D006894 1.0e-32 144.4 89 75.3
Cpa.g.sc244.11 Carica papaya HOM05D005678 ORTHO05D006894 1.0e-32 144.4 103 66.0
MD00G1173100 Malus domestica HOM05D005678 ORTHO05D006894 1.0e-32 144.4 90 73.3
MD08G1134200 Malus domestica HOM05D005678 ORTHO05D006894 1.0e-32 144.4 90 73.3
AL7G20710 Arabidopsis lyrata HOM05D005678 ORTHO05D006894 1.3e-32 144.1 90 73.3
Migut.A00794 Erythranthe guttata HOM05D005678 ORTHO05D006894 1.3e-32 144.1 97 69.1
PGR142G1712 Punica granatum HOM05D005678 ORTHO05D006894 1.3e-32 144.1 104 69.2
Sc09g0007970 Simmondsia chinensis HOM05D005678 ORTHO05D006894 1.3e-32 144.1 85 78.8
Sabra18G0010600 Salix brachista HOM05D005678 ORTHO05D006894 1.7e-32 143.7 99 69.7
A01p06940 Brassica napus HOM05D005678 ORTHO05D006894 2.3e-32 143.3 90 72.2
BraA01t00642Z Brassica rapa HOM05D005678 ORTHO05D006894 2.3e-32 143.3 90 72.2
HanXRQChr06g0173291 Helianthus annuus HOM05D005678 ORTHO05D006894 2.3e-32 143.3 90 71.1
Sp7g29220 Schrenkiella parvula HOM05D005678 ORTHO05D006894 3.0e-32 142.9 84 75.0
SGA_v2.0_scaffold146G36252 Striga asiatica HOM05D005678 ORTHO05D006894 3.0e-32 142.9 87 75.9
arahy.Tifrunner.gnm1.ann1.V3TD4F Arachis hypogaea HOM05D005678 ORTHO05D006894 3.9e-32 142.5 95 69.5
arahy.Tifrunner.gnm1.ann1.XT6XQE Arachis hypogaea HOM05D005678 ORTHO05D006894 3.9e-32 142.5 95 69.5
Duzib168G0107 Durio zibethinus HOM05D005678 ORTHO05D006894 6.6e-32 141.7 109 67.0
AT4G31360 Arabidopsis thaliana HOM05D005678 ORTHO05D006894 1.1e-31 141.0 90 72.2
HanXRQChr17g0536371 Helianthus annuus HOM05D005678 ORTHO05D006894 1.9e-31 140.2 98 67.3
A08p18690 Brassica napus HOM05D002168 ORTHO05D002277 3.3e-31 139.4 98 67.3
AT2G24440 Arabidopsis thaliana HOM05D005678 ORTHO05D006894 5.6e-31 138.7 84 76.2
PSO170G6167 Papaver somniferum HOM05D005678 ORTHO05D006894 5.6e-31 138.7 99 67.7
Glyma.14G133100 Glycine max HOM05D005678 ORTHO05D006894 7.3e-31 138.3 109 63.3
Lsat_1_v5_gn_3_22720 Lactuca sativa HOM05D005678 ORTHO05D006894 7.3e-31 138.3 85 75.3
PSO063G6472 Papaver somniferum HOM05D005678 ORTHO05D006894 7.3e-31 138.3 89 73.0
AL4G14870 Arabidopsis lyrata HOM05D005678 ORTHO05D006894 9.6e-31 137.9 84 75.0
Glyma.17G201900 Glycine max HOM05D005678 ORTHO05D006894 1.6e-30 137.1 104 63.5
SalBow6G4551 Salvia bowleyana HOM05D005678 ORTHO05D006894 2.1e-30 136.7 100 65.0
BcaB06g27969 Brassica carinata HOM05D005678 ORTHO05D006894 2.8e-30 136.3 89 71.9
Carub.0004s0379 Capsella rubella HOM05D005678 ORTHO05D006894 2.8e-30 136.3 84 73.8
MSTRG.1882 Avicennia marina HOM05D005678 ORTHO05D006894 6.2e-30 135.2 97 64.9
CAN.G859.10 Capsicum annuum HOM05D005678 ORTHO05D006894 6.2e-30 135.2 89 71.9
BcaC02g08455 Brassica carinata HOM05D005678 ORTHO05D006894 1.4e-29 134.0 86 72.1
C04p54050 Brassica napus HOM05D005678 ORTHO05D006894 1.4e-29 134.0 86 72.1
BolC4t26956H Brassica oleracea HOM05D005678 ORTHO05D006894 1.4e-29 134.0 86 72.1
Sabra06G0213900 Salix brachista HOM05D005678 ORTHO05D006894 2.4e-29 133.3 104 63.5
BolC3t21115H Brassica oleracea HOM05D005678 ORTHO05D006894 3.1e-29 132.9 100 67.0
Sopen08g029020 Solanum pennellii HOM05D005678 ORTHO05D006894 4.0e-29 132.5 108 62.0
A09p56300 Brassica napus HOM05D005678 ORTHO05D006894 5.3e-29 132.1 89 68.5
C08p39250 Brassica napus HOM05D005678 ORTHO05D006894 5.3e-29 132.1 89 68.5
BraA09t41025Z Brassica rapa HOM05D005678 ORTHO05D006894 5.3e-29 132.1 89 68.5
PGSC0003DMG400003060 Solanum tuberosum HOM05D005678 ORTHO05D006894 5.3e-29 132.1 108 62.0
BolC8t51499H Brassica oleracea HOM05D005678 ORTHO05D006894 9.0e-29 131.3 89 68.5
A04p18760 Brassica napus HOM05D005678 ORTHO05D006894 1.5e-28 130.6 86 69.8
BraA04t17485Z Brassica rapa HOM05D005678 ORTHO05D006894 1.5e-28 130.6 86 69.8
Ca_12878_v3 Cicer arietinum L. HOM05D005678 ORTHO05D006894 3.4e-28 129.4 100 65.0
MD15G1109600 Malus domestica HOM05D005678 ORTHO05D006894 3.4e-28 129.4 104 63.5
Lalb_Chr24g0402441 Lupinus albus HOM05D005678 ORTHO05D006894 4.5e-28 129.0 86 68.6
TWI34G1196 Tripterygium wilfordii HOM05D005678 ORTHO05D006894 7.6e-28 128.3 108 61.1
VMungo0647G1216 Vigna mungo HOM05D005678 ORTHO05D006894 7.6e-28 128.3 102 59.8
Phvul.001G058200 Phaseolus vulgaris HOM05D005678 ORTHO05D006894 9.9e-28 127.9 88 64.8
Os11g0704000 Oryza sativa ssp. japonica HOM05D005678 ORTHO05D006894 1.7e-27 127.1 92 64.1
MBI16_g25208_MAGBIO Magnolia biondii HOM05D005678 ORTHO05D006894 2.2e-27 126.7 105 58.1
FAN27G1837 Fragaria x ananassa HOM05D005678 ORTHO05D006894 2.9e-27 126.3 102 62.7
FAN15G3337 Fragaria x ananassa HOM05D005678 ORTHO05D006894 4.9e-27 125.6 102 62.7
TPR.G12081 Trifolium pratense HOM05D005678 ORTHO05D006894 4.9e-27 125.6 85 69.4
FvH4_2g30710 Fragaria vesca HOM05D005678 ORTHO05D006894 6.4e-27 125.2 102 62.7
FAN20G0695 Fragaria x ananassa HOM05D005678 ORTHO05D006894 6.4e-27 125.2 102 62.7
FAN24G1799 Fragaria x ananassa HOM05D000178 ORTHO05D001582 6.4e-27 125.2 102 62.7
RcHm_v2.0_Chr6g0312181 Rosa chinensis HOM05D005678 ORTHO05D006894 6.4e-27 125.2 107 61.7
COL.COLO4_19050 Corchorus olitorius HOM05D005678 ORTHO05D006894 8.4e-27 124.8 106 56.6
Thhalv10000334m.g Eutrema salsugineum HOM05D005678 ORTHO05D006894 1.1e-26 124.4 84 67.9
Sp4g03460 Schrenkiella parvula HOM05D005678 ORTHO05D006894 1.1e-26 124.4 79 70.9
Sabra18G0000200 Salix brachista HOM05D005678 ORTHO05D006894 5.4e-26 122.1 144 47.9
Zm00001eb409020 Zea mays HOM05D005678 ORTHO05D006894 5.4e-26 122.1 97 60.8
Aa31LG7G11430 Aethionema arabicum HOM05D005678 ORTHO05D006894 7.1e-26 121.7 103 61.2
Os05g0250500 Oryza sativa ssp. japonica HOM05D005678 ORTHO05D006894 2.1e-25 120.2 98 60.2
SHI21122 Sapria himalayana HOM05D005678 ORTHO05D006894 2.7e-25 119.8 77 68.8
Atru.chr7.2621 Acer truncatum HOM05D005678 ORTHO05D006894 6.0e-25 118.6 103 52.4
TWI63G1651 Tripterygium wilfordii HOM05D005678 ORTHO05D006894 6.0e-25 118.6 91 62.6
Psat6g032200 Pisum sativum HOM05D005678 ORTHO05D006894 1.8e-24 117.1 80 72.5
Aqoxy7G03048 Aquilegia oxysepala HOM05D005678 ORTHO05D006894 2.3e-24 116.7 89 60.7
BcaC07g40931 Brassica carinata HOM05D005678 ORTHO05D006894 8.7e-24 114.8 94 61.7
SGA_v2.0_scaffold144G35960 Striga asiatica HOM05D000250 ORTHO05D002850 8.7e-24 114.8 89 56.2
Pp3c6_27420 Physcomitrium patens HOM05D005678 ORTHO05D006894 1.9e-23 113.6 85 57.6
CARHR239240 Cardamine hirsuta HOM05D005678 ORTHO05D006894 2.5e-23 113.2 69 78.3
Pp3c5_240 Physcomitrium patens HOM05D005678 ORTHO05D006894 4.8e-22 109.0 109 49.5
Migut.E01115 Erythranthe guttata HOM05D005678 ORTHO05D006894 4.0e-21 105.9 87 57.5
Haze_21702 Corylus avellana HOM05D005678 ORTHO05D006894 6.9e-21 105.1 54 87.0
Peaxi162Scf00102g01516 Petunia axillaris HOM05D005678 ORTHO05D006894 6.9e-21 105.1 74 67.6
Hund19398 Selenicereus undatus HOM05D005678 ORTHO05D006894 5.8e-20 102.1 90 53.3
BcaC01g01095 Brassica carinata HOM05D005678 ORTHO05D006894 1.7e-19 100.5 67 71.6
SEGI_38696 Sequoiadendron giganteum HOM05D005678 ORTHO05D006894 3.8e-19 99.4 88 48.9
Rhsim09G0030000 Rhododendron simsii HOM05D005678 ORTHO05D006894 1.1e-18 97.8 102 52.9
HPP92_015389 Vanilla planifolia HOM05D005678 ORTHO05D006894 4.2e-18 95.9 82 52.4
HPP92_027003 Vanilla planifolia HOM05D005678 ORTHO05D006894 4.2e-18 95.9 82 52.4
Mapoly0188s0010 Marchantia polymorpha HOM05D005678 ORTHO05D006894 7.1e-18 95.1 90 45.6
Haze_21709 Corylus avellana HOM05D005678 ORTHO05D006894 2.1e-17 93.6 206 32.5
Migut.E01114 Erythranthe guttata HOM05D005678 ORTHO05D006894 1.9e-15 87.0 90 46.7
HanXRQChr04g0118101 Helianthus annuus HOM05D005678 ORTHO05D006894 1.6e-14 84.0 56 62.5
Cre02.g120301 Chlamydomonas reinhardtii HOM05D005678 ORTHO05D006894 6.9e-13 78.6 77 44.2
C03p88040 Brassica napus HOM05D005678 ORTHO05D006894 5.5e-10 68.9 57 59.6
CDE07G1371 Ceratophyllum demersum HOM05D005678 ORTHO05D006894 3.5e-09 66.2 60 53.3
MELO3C016433.2 Cucumis melo HOM05D005678 ORTHO05D006894 1.8e-08 63.9 61 54.1
Haze_20337 Corylus avellana HOM05D005678 ORTHO05D006894 3.0e-08 63.2 34 82.4
Haze_21673 Corylus avellana HOM05D000022 ORTHO05D011766 1.6e-06 57.4 57 56.1
Potri.006G276300 Populus trichocarpa HOM05D005678 ORTHO05D006894 2.1e-06 57.0 48 58.3
ATR0580G376 Amborella trichopoda HOM05D005678 ORTHO05D006894 6.3e-06 55.5 53 47.2


User provided reference genes

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