Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02018 Eucalyptus grandis HOM05D007251 ORTHO05D009266 0.0e+00 1111.3 601 100.0
Dinv18148 Davidia involucrata HOM05D007251 ORTHO05D009266 6.0e-205 718.0 579 64.4
TAR626G1006 Trochodendron aralioides HOM05D007251 ORTHO05D009266 3.9e-204 715.3 601 62.2
QL12p025168 Quercus lobata HOM05D007251 ORTHO05D009266 7.4e-203 711.1 556 64.6
Potri.006G273400 Populus trichocarpa HOM05D007251 ORTHO05D009266 1.4e-201 706.8 577 66.9
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 2.4e-201 706.1 571 64.3
CSS0035408 Camellia sinensis var. sinensis HOM05D007251 ORTHO05D009266 3.1e-201 705.7 580 63.4
Cpa.g.sc23.18 Carica papaya HOM05D007251 ORTHO05D009266 2.5e-198 696.0 575 68.5
Prupe.1G459800 Prunus persica HOM05D007251 ORTHO05D009266 9.3e-198 694.1 565 63.5
Nitab4.5_0000502g0130 Nicotiana tabacum HOM05D007251 ORTHO05D009266 2.5e-195 686.0 567 60.1
Solyc08g069010.4 Solanum lycopersicum HOM05D007251 ORTHO05D009266 9.7e-195 684.1 565 60.7
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 1.6e-194 683.3 560 62.0
Sopen08g022660 Solanum pennellii HOM05D007251 ORTHO05D009266 2.8e-194 682.6 560 60.7
CAN.G908.8 Capsicum annuum HOM05D007251 ORTHO05D009266 1.4e-193 680.2 563 60.0
GSVIVG01035517001 Vitis vinifera HOM05D007251 ORTHO05D009266 3.1e-193 679.1 536 65.7
TWI34G2010 Tripterygium wilfordii HOM05D007251 ORTHO05D009266 2.6e-192 676.0 580 60.7
RcHm_v2.0_Chr6g0305021 Rosa chinensis HOM05D007251 ORTHO05D009266 4.2e-190 668.7 564 62.4
Nitab4.5_0002023g0010 Nicotiana tabacum HOM05D007251 ORTHO05D009266 5.5e-190 668.3 569 59.4
FvH4_2g36670 Fragaria vesca HOM05D007251 ORTHO05D009266 2.1e-189 666.4 578 59.2
Gohir.A05G064200 Gossypium hirsutum HOM05D007251 ORTHO05D009266 2.0e-187 659.8 631 57.7
Duzib168G1420 Durio zibethinus HOM05D007251 ORTHO05D009266 4.4e-187 658.7 510 66.3
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 9.7e-187 657.5 587 60.1
Sabra06G0211800 Salix brachista HOM05D007251 ORTHO05D009266 3.7e-186 655.6 616 58.8
Nn8g40494 Nelumbo nucifera HOM05D007251 ORTHO05D009266 6.3e-186 654.8 601 56.9
A02p00600 Brassica napus HOM05D007251 ORTHO05D009266 6.9e-185 651.4 561 60.4
BcaB05g21499 Brassica carinata HOM05D007251 ORTHO05D009266 1.2e-184 650.6 560 60.4
BraA02t05043Z Brassica rapa HOM05D007251 ORTHO05D009266 1.5e-184 650.2 561 60.1
FAN15G3149 Fragaria x ananassa HOM05D007251 ORTHO05D009266 7.7e-184 647.9 592 59.3
Aqoxy7G03087 Aquilegia oxysepala HOM05D007251 ORTHO05D009266 1.3e-183 647.1 570 59.3
BolC2t06419H Brassica oleracea HOM05D007251 ORTHO05D009266 2.2e-183 646.4 561 60.2
Migut.E01424 Erythranthe guttata HOM05D007251 ORTHO05D009266 2.9e-183 646.0 536 58.8
Gorai.009G067600 Gossypium raimondii HOM05D007251 ORTHO05D009266 6.5e-183 644.8 569 60.6
SalBow8G3910 Salvia bowleyana HOM05D007251 ORTHO05D009266 6.5e-183 644.8 554 58.8
Thecc.09G007500 Theobroma cacao HOM05D007251 ORTHO05D009266 6.5e-183 644.8 591 60.1
Sp6g32780 Schrenkiella parvula HOM05D007251 ORTHO05D009266 8.5e-183 644.4 560 60.4
C02p04590 Brassica napus HOM05D007251 ORTHO05D009266 3.2e-182 642.5 561 59.9
MELO3C003624.2 Cucumis melo HOM05D007251 ORTHO05D009266 9.4e-182 641.0 573 58.6
FAN27G2253 Fragaria x ananassa HOM05D007251 ORTHO05D009266 9.4e-182 641.0 584 59.2
SalBow8G5364 Salvia bowleyana HOM05D007251 ORTHO05D009266 9.4e-182 641.0 554 58.7
BcaC03g13325 Brassica carinata HOM05D007251 ORTHO05D009266 1.2e-181 640.6 565 59.8
Peaxi162Scf00288g00912 Petunia axillaris HOM05D007251 ORTHO05D009266 1.2e-181 640.6 522 63.0
Gohir.D05G066800 Gossypium hirsutum HOM05D007251 ORTHO05D009266 6.1e-181 638.3 569 60.3
Glyma.14G134800 Glycine max HOM05D007251 ORTHO05D009266 1.4e-180 637.1 572 58.6
Ah.11g043880 Amaranthus hybridus HOM05D007251 ORTHO05D009266 3.9e-180 635.6 544 59.0
AUR62020596 Chenopodium quinoa HOM05D007251 ORTHO05D009266 1.1e-179 634.0 547 59.0
SGA_v2.0_scaffold121G33030 Striga asiatica HOM05D007251 ORTHO05D009266 5.5e-174 615.1 585 56.6
Lj7C750G16 Lonicera japonica HOM05D007251 ORTHO05D009266 2.7e-173 612.8 511 60.5
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 4.7e-173 612.1 577 56.2
arahy.Tifrunner.gnm1.ann1.ULFK5V Arachis hypogaea HOM05D007251 ORTHO05D009266 8.8e-172 607.8 542 57.7
DCAR_003023 Daucus carota HOM05D007251 ORTHO05D009266 1.5e-171 607.1 545 56.5
arahy.Tifrunner.gnm1.ann1.5WJ9LU Arachis hypogaea HOM05D007251 ORTHO05D009266 1.3e-170 604.0 542 57.4
Phvul.001G059500 Phaseolus vulgaris HOM05D007251 ORTHO05D009266 4.8e-170 602.1 557 55.5
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 8.2e-170 601.3 600 54.2
Lalb_Chr24g0402511 Lupinus albus HOM05D007251 ORTHO05D009266 1.1e-169 600.9 564 57.1
Hund03293 Selenicereus undatus HOM05D007251 ORTHO05D009266 1.4e-169 600.5 581 54.0
COL.COLO4_19030 Corchorus olitorius HOM05D007251 ORTHO05D009266 3.1e-169 599.4 504 62.9
VMungo0647G2138 Vigna mungo HOM05D007251 ORTHO05D009266 1.3e-167 594.0 557 54.9
Thhalv10013072m.g Eutrema salsugineum HOM05D007251 ORTHO05D009266 3.2e-166 589.3 560 57.0
Psat6g032880 Pisum sativum HOM05D007251 ORTHO05D009266 7.2e-166 588.2 564 55.7
AT5G10690 Arabidopsis thaliana HOM05D007251 ORTHO05D009266 9.4e-166 587.8 561 56.7
AUR62009072 Chenopodium quinoa HOM05D007251 ORTHO05D009266 2.1e-165 586.6 497 58.6
ClCG05G017600 Citrullus lanatus HOM05D007251 ORTHO05D009266 6.1e-165 585.1 593 54.1
Aa31LG3G16450 Aethionema arabicum HOM05D007251 ORTHO05D009266 1.0e-164 584.3 555 56.4
TPR.G12085 Trifolium pratense HOM05D007251 ORTHO05D009266 3.4e-163 579.3 571 53.9
Medtr1g009650 Medicago truncatula HOM05D007251 ORTHO05D009266 9.8e-163 577.8 569 54.7
CARHR202630 Cardamine hirsuta HOM05D007251 ORTHO05D009266 2.2e-162 576.6 560 55.7
ATR0580G362 Amborella trichopoda HOM05D007251 ORTHO05D009266 4.1e-161 572.4 543 54.3
Glyma.17G197900 Glycine max HOM05D007251 ORTHO05D009266 7.7e-160 568.2 538 55.4
EL10Ac2g03759 Beta vulgaris HOM05D007251 ORTHO05D009266 5.5e-158 562.0 543 53.8
Zm00001eb099850 Zea mays HOM05D007251 ORTHO05D009266 3.1e-153 546.2 583 50.8
CANSAT56G3637 Cannabis sativa HOM05D007251 ORTHO05D009266 1.6e-152 543.9 498 55.2
Os09g0431600 Oryza sativa ssp. japonica HOM05D007251 ORTHO05D009266 2.8e-149 533.1 556 50.4
Atru.BG.4.p Acer truncatum HOM05D007251 ORTHO05D009266 8.0e-149 531.6 507 57.6
MBI16_g41809_MAGBIO Magnolia biondii HOM05D007251 ORTHO05D009266 9.8e-147 524.6 589 50.8
Manes.16G135400 Manihot esculenta HOM05D007251 ORTHO05D009266 1.7e-146 523.9 408 64.5
Ca_12854_v3 Cicer arietinum L. HOM05D007251 ORTHO05D009266 1.0e-143 514.6 554 50.5
Haze_21751 Corylus avellana HOM05D007251 ORTHO05D009266 5.0e-143 512.3 558 52.5
CDE05G1868 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 1.8e-140 503.8 504 54.2
AL6G21210 Arabidopsis lyrata HOM05D007251 ORTHO05D009266 9.2e-129 464.9 429 58.0
CsaV3_3G047120 Cucumis sativus L. HOM05D007251 ORTHO05D009266 1.9e-121 440.7 418 57.4
Sed0014514 Sechium edule HOM05D007251 ORTHO05D009266 1.1e-118 431.4 412 56.6
Carub.0006s0915 Capsella rubella HOM05D007251 ORTHO05D009266 7.8e-112 408.7 381 55.4
Cfa013277 Carpinus fangiana HOM05D007251 ORTHO05D009266 1.3e-106 391.3 401 53.4
Mapoly0043s0002 Marchantia polymorpha HOM05D007251 ORTHO05D009266 1.6e-101 374.4 546 43.6
Ciclev10010499m.g Citrus clementina HOM05D007251 ORTHO05D009266 6.4e-98 362.5 536 43.8
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 6.7e-95 352.4 519 44.1
CBR_g20311 Chara braunii HOM05D007251 ORTHO05D009266 1.9e-89 334.3 503 37.8
SMO137G0044 Selaginella moellendorffii HOM05D007251 ORTHO05D009266 6.9e-84 315.8 490 38.2
Pp3c8_4280 Physcomitrium patens HOM05D007251 ORTHO05D009266 3.1e-68 263.8 384 40.9
Sabra06G0212100 Salix brachista HOM05D007251 ORTHO05D009266 3.2e-65 253.8 217 59.0
Oeu019776.1 Olea europaea HOM05D007251 ORTHO05D009266 8.0e-56 222.6 196 57.7
Actinidia06425 Actinidia chinensis HOM05D007251 ORTHO05D009266 1.8e-55 221.5 181 64.6
Potri.006G274133 Populus trichocarpa HOM05D007251 ORTHO05D009266 5.2e-55 219.9 154 71.4
Cfa023054 Carpinus fangiana HOM05D007251 ORTHO05D009266 2.8e-53 214.2 156 68.6
CDE05G2179 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 5.9e-43 179.9 190 53.2
CiPaw.01G062100 Carya illinoinensis HOM05D007251 ORTHO05D009266 6.6e-42 176.4 168 73.8
Actinidia22253 Actinidia chinensis HOM05D007251 ORTHO05D009266 6.6e-26 123.2 80 75.0
Actinidia22254 Actinidia chinensis HOM05D007251 ORTHO05D009266 3.3e-25 120.9 96 62.5
Oeu019281.1 Olea europaea HOM05D007251 ORTHO05D009266 2.6e-22 111.3 83 60.2
Cfa019806 Carpinus fangiana HOM05D007251 ORTHO05D009266 4.9e-13 80.5 64 67.2
Oeu042188.1 Olea europaea HOM05D007251 ORTHO05D009266 5.4e-12 77.0 62 62.9
TAR636G1232 Trochodendron aralioides HOM05D000282 ORTHO05D000272 1.2e-11 75.9 46 78.3
TAR629G1521 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.6e-11 75.5 46 76.1
CSS0023086 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 1.5e-06 58.9 357 20.7
Psat2g150720 Pisum sativum HOM05D007251 ORTHO05D009266 2.0e-06 58.5 46 58.7
TWI39G0515 Tripterygium wilfordii HOM05D006156 ORTHO05D007699 2.0e-06 58.5 141 27.7
Zm00001eb263120 Zea mays HOM05D007251 ORTHO05D009266 2.0e-06 58.5 57 61.4
CSS0013853 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 2.6e-06 58.2 357 20.7
Migut.J00415 Erythranthe guttata HOM05D000855 ORTHO05D008530 2.6e-06 58.2 318 22.3
Medtr3g091460 Medicago truncatula HOM05D006156 ORTHO05D007699 2.6e-06 58.2 141 25.5
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 3.4e-06 57.8 371 21.0


User provided reference genes

Program Settings