Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01887 Eucalyptus grandis HOM05D005004 ORTHO05D193955 8.2e-58 226.9 117 100.0
Eucgr.C01891 Eucalyptus grandis HOM05D005004 ORTHO05D006097 3.4e-43 178.3 105 87.6
Eucgr.L03536 Eucalyptus grandis HOM05D005004 ORTHO05D006097 7.3e-14 80.9 52 78.8
Eucgr.K02041 Eucalyptus grandis HOM05D005004 ORTHO05D006097 6.2e-13 77.8 52 76.9
Gohir.D01G127800 Gossypium hirsutum HOM05D005004 ORTHO05D006097 2.0e-11 72.8 58 65.5
Gorai.002G158400 Gossypium raimondii HOM05D005004 ORTHO05D006097 2.0e-11 72.8 58 65.5
COL.COLO4_29735 Corchorus olitorius HOM05D005004 ORTHO05D006097 7.5e-11 70.9 58 56.9
Gohir.A01G138100 Gossypium hirsutum HOM05D005004 ORTHO05D006097 7.5e-11 70.9 58 62.1
CSS0009320 Camellia sinensis var. sinensis HOM05D005004 ORTHO05D006097 6.4e-10 67.8 56 64.3
TWI77G0413 Tripterygium wilfordii HOM05D005004 ORTHO05D006097 1.4e-09 66.6 51 64.7
Duzib093G1830 Durio zibethinus HOM05D005004 ORTHO05D006097 2.4e-09 65.9 62 54.8
Dinv31686 Davidia involucrata HOM05D005004 ORTHO05D006097 3.2e-09 65.5 50 66.0
Gohir.D01G195700 Gossypium hirsutum HOM05D005004 ORTHO05D006097 7.1e-09 64.3 58 51.7
CARHR209350 Cardamine hirsuta HOM05D005004 ORTHO05D006097 9.2e-09 63.9 59 59.3
Duzib106G1905 Durio zibethinus HOM05D005004 ORTHO05D006097 9.2e-09 63.9 61 55.7
Gorai.002G239900 Gossypium raimondii HOM05D005004 ORTHO05D006097 2.7e-08 62.4 59 50.8
Gohir.A01G206300 Gossypium hirsutum HOM05D005004 ORTHO05D006097 3.5e-08 62.0 58 50.0
AL6G13490 Arabidopsis lyrata HOM05D005004 ORTHO05D006097 1.0e-07 60.5 59 55.9
Cpa.g.sc5.20 Carica papaya HOM05D005004 ORTHO05D006097 1.0e-07 60.5 61 55.7
QL07p038766 Quercus lobata HOM05D005004 ORTHO05D006097 1.0e-07 60.5 50 52.0
TWI53G1915 Tripterygium wilfordii HOM05D005004 ORTHO05D006097 1.3e-07 60.1 51 56.9
Carub.0006s0286 Capsella rubella HOM05D005004 ORTHO05D006097 1.7e-07 59.7 59 55.9
Dinv21208 Davidia involucrata HOM05D005004 ORTHO05D006097 1.7e-07 59.7 50 58.0
QL07p039017 Quercus lobata HOM05D005004 ORTHO05D006097 3.9e-07 58.5 50 50.0
Atru.chr8.1540 Acer truncatum HOM05D005004 ORTHO05D006097 1.5e-06 56.6 64 42.2
BcaB05g21795 Brassica carinata HOM05D005004 ORTHO05D006097 1.9e-06 56.2 55 52.7
Ciclev10012954m.g Citrus clementina HOM05D005004 ORTHO05D006097 1.9e-06 56.2 63 50.8
THA.LOC104826944 Tarenaya hassleriana HOM05D005004 ORTHO05D006097 1.9e-06 56.2 68 45.6
AT5G03905 Arabidopsis thaliana HOM05D005004 ORTHO05D006097 2.5e-06 55.8 59 52.5
MSTRG.10365 Avicennia marina HOM05D005004 ORTHO05D006097 2.5e-06 55.8 56 57.1
Manes.08G025200 Manihot esculenta HOM05D005004 ORTHO05D006097 2.5e-06 55.8 53 58.5
CsaV3_1G033770 Cucumis sativus L. HOM05D005004 ORTHO05D006097 3.3e-06 55.5 56 58.9


User provided reference genes

Program Settings