Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 2.4e-41 171.8 89 100.0
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 3.5e-32 141.4 84 86.9
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 1.7e-31 139.0 83 86.7
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 2.2e-31 138.7 84 88.1
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 2.9e-31 138.3 85 87.1
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-30 136.0 82 82.9
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-30 136.0 82 82.9
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-30 136.0 82 82.9
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-30 136.0 82 82.9
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-30 136.0 82 82.9
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-30 136.0 82 82.9
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 1.9e-30 135.6 83 84.3
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 3.2e-30 134.8 83 84.3
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 3.2e-30 134.8 83 84.3
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 3.2e-30 134.8 83 84.3
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 3.2e-30 134.8 83 84.3
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 3.2e-30 134.8 83 84.3
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 3.2e-30 134.8 83 84.3
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 3.2e-30 134.8 83 84.3
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 3.2e-30 134.8 83 84.3
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 3.2e-30 134.8 84 85.7
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 4.2e-30 134.4 84 84.5
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 9.4e-30 133.3 84 83.3
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.2e-29 132.9 80 85.0
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.2e-29 132.9 80 85.0
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 1.2e-29 132.9 84 85.7
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 1.2e-29 132.9 84 85.7
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 1.6e-29 132.5 79 86.1
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 2.1e-29 132.1 84 84.5
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 2.1e-29 132.1 84 83.3
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 2.7e-29 131.7 84 82.1
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 2.7e-29 131.7 84 82.1
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 4.7e-29 131.0 79 84.8
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 8.0e-29 130.2 84 83.3
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 1.8e-28 129.0 84 83.3
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.3e-28 128.6 79 83.5
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 3.0e-28 128.3 77 83.1
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 5.2e-28 127.5 77 84.4
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 1.2e-27 126.3 77 80.5
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.0e-27 125.6 77 83.1
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 7.5e-27 123.6 79 82.3
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 9.7e-27 123.2 80 78.8
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.8e-26 121.7 79 81.0
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 3.7e-26 121.3 78 78.2
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 8.3e-26 120.2 84 76.2
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.1e-25 119.8 79 79.7
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.1e-25 119.8 75 77.3
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 1.4e-25 119.4 74 85.1
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.4e-25 118.6 82 70.7
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.4e-25 118.6 82 70.7
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.4e-25 118.6 82 70.7
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.4e-25 118.6 82 70.7
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.4e-25 118.6 82 70.7
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.4e-25 118.6 82 70.7
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 4.1e-25 117.9 84 75.0
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 2.7e-24 115.2 80 77.5
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 5.9e-24 114.0 82 70.7
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.0e-23 113.2 75 76.0
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.5e-22 108.6 68 80.9
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 5.5e-22 107.5 132 52.3
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 7.2e-22 107.1 73 75.3
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 2.1e-21 105.5 61 88.5
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 2.7e-21 105.1 63 82.5
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 1.8e-20 102.4 64 79.7
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 5.2e-20 100.9 65 78.5
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 5.2e-20 100.9 63 87.3
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 8.8e-20 100.1 62 82.3
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.0e-19 99.0 65 72.3
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 2.6e-19 98.6 64 79.7
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 5.7e-19 97.4 58 84.5
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 2.8e-18 95.1 62 79.0
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 2.4e-17 92.0 59 83.1
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 9.1e-17 90.1 68 73.5
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 1.2e-16 89.7 58 77.6
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 2.9e-15 85.1 54 81.5
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 2.5e-14 82.0 63 66.7
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 2.1e-13 79.0 48 75.0
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 8.0e-13 77.0 54 75.9
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 1.4e-12 76.3 53 71.7
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 2.3e-12 75.5 64 62.5
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 1.3e-10 69.7 45 80.0
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 9.2e-09 63.5 52 61.5
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 1.6e-08 62.8 74 44.6
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 5.9e-08 60.8 80 40.0
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 7.8e-08 60.5 73 41.1
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 1.0e-07 60.1 68 42.6


User provided reference genes

Program Settings