Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 6.5e-79 297.4 153 100.0
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 3.4e-19 99.0 168 44.0
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 9.8e-19 97.4 153 44.4
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 2.2e-18 96.3 154 42.2
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 6.4e-18 94.7 158 43.7
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.1e-17 94.0 151 41.1
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 2.4e-17 92.8 154 40.9
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 1.2e-16 90.5 165 40.0
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.6e-16 90.1 155 41.9
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.6e-16 90.1 155 40.0
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 1.6e-16 90.1 157 39.5
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 2.1e-16 89.7 161 38.5
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 2.1e-16 89.7 150 40.7
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 3.5e-16 89.0 154 40.9
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 6.0e-16 88.2 157 38.9
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 6.0e-16 88.2 153 41.2
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 7.8e-16 87.8 106 49.1
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 7.8e-16 87.8 156 42.9
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.3e-15 87.0 169 37.9
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.7e-15 86.7 156 37.8
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 1.7e-15 86.7 158 39.2
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 3.0e-15 85.9 158 39.9
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 3.0e-15 85.9 154 39.6
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 3.9e-15 85.5 155 38.7
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 3.9e-15 85.5 156 41.0
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 5.1e-15 85.1 105 47.6
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 5.1e-15 85.1 152 38.2
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 5.1e-15 85.1 158 38.6
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 8.6e-15 84.3 159 39.6
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 1.1e-14 84.0 154 40.9
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 3.3e-14 82.4 161 41.0
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 7.3e-14 81.3 156 39.7
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 1.2e-13 80.5 148 37.2
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 3.6e-13 79.0 158 37.3
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 4.7e-13 78.6 164 37.8
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 4.7e-13 78.6 158 36.7
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 6.2e-13 78.2 158 39.2
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 6.2e-13 78.2 154 39.0
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 8.1e-13 77.8 153 39.9
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 1.1e-12 77.4 155 36.1
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 1.4e-12 77.0 156 39.1
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 1.4e-12 77.0 159 35.8
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 1.8e-12 76.6 163 39.9
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.8e-12 76.6 161 35.4
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 2.3e-12 76.3 163 39.9
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 2.3e-12 76.3 62 58.1
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 3.1e-12 75.9 166 40.4
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 4.0e-12 75.5 166 38.6
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 4.0e-12 75.5 157 40.8
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 4.0e-12 75.5 142 35.2
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 5.2e-12 75.1 163 40.5
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 5.2e-12 75.1 163 40.5
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 5.2e-12 75.1 163 40.5
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 5.2e-12 75.1 156 40.4
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 5.2e-12 75.1 156 33.3
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 6.8e-12 74.7 158 37.3
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 1.2e-11 73.9 150 34.7
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.2e-11 73.9 158 38.6
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 1.5e-11 73.6 158 37.3
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 2.0e-11 73.2 158 35.4
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 4.4e-11 72.0 156 34.0
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 5.8e-11 71.6 161 36.0
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 5.8e-11 71.6 105 43.8
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 7.6e-11 71.2 161 35.4
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 7.6e-11 71.2 160 37.5
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 9.9e-11 70.9 155 35.5
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 1.3e-10 70.5 164 36.6
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 1.3e-10 70.5 158 36.7
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.7e-10 70.1 160 36.9
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 1.7e-10 70.1 149 36.9
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 2.9e-10 69.3 79 45.6
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 3.8e-10 68.9 157 35.7
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 4.9e-10 68.6 65 53.8
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 6.4e-10 68.2 107 42.1
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 6.4e-10 68.2 109 36.7
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 1.4e-09 67.0 157 32.5
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 1.4e-09 67.0 172 34.3
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 1.9e-09 66.6 161 32.3
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 1.9e-09 66.6 151 34.4
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 1.9e-09 66.6 154 37.7
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 2.4e-09 66.2 87 43.7
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 2.4e-09 66.2 158 32.9
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 4.1e-09 65.5 158 37.3
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 5.4e-09 65.1 102 38.2
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.6e-08 63.5 162 34.6
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 2.7e-08 62.8 158 32.9
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 7.8e-08 61.2 141 31.2
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 3.0e-07 59.3 36 66.7
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 5.1e-07 58.5 156 35.3
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 6.6e-07 58.2 70 51.4
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 8.6e-07 57.8 152 32.2
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 8.6e-07 57.8 68 45.6
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 1.9e-06 56.6 165 32.7
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 2.5e-06 56.2 164 32.3


User provided reference genes

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