Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01694 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.5e-71 270.8 129 100.0
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.6e-62 241.1 136 89.7
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 8.2e-51 203.8 129 79.8
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.6e-49 198.7 129 81.4
Eucgr.C01698 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.0e-48 196.8 129 79.8
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.9e-48 195.3 129 81.4
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.9e-47 192.6 129 80.6
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.5e-47 192.2 132 78.8
Eucgr.C01640 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.2e-39 165.2 92 90.2
Eucgr.C01690 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.2e-33 146.7 97 78.4
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.2e-30 136.7 85 81.2
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.9e-11 72.4 127 37.8
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 3.7e-11 72.0 117 44.4
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 4.9e-11 71.6 117 41.0
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 8.3e-11 70.9 71 53.5
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 1.1e-10 70.5 118 41.5
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.1e-10 70.5 115 40.9
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 2.4e-10 69.3 117 45.3
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.4e-10 69.3 123 37.4
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.4e-10 69.3 109 39.4
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 4.1e-10 68.6 124 39.5
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 5.4e-10 68.2 109 41.3
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 5.4e-10 68.2 120 39.2
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 5.4e-10 68.2 123 36.6
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 7.0e-10 67.8 113 38.9
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.6e-09 66.6 69 53.6
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 3.5e-09 65.5 126 40.5
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 3.5e-09 65.5 112 42.9
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 4.6e-09 65.1 125 40.8
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 6.0e-09 64.7 111 40.5
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.0e-08 63.9 114 38.6
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.0e-08 63.9 114 38.6
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 1.3e-08 63.5 123 38.2
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.3e-08 63.5 69 52.2
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 1.7e-08 63.2 70 44.3
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.7e-08 63.2 120 37.5
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 3.0e-08 62.4 109 38.5
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 3.9e-08 62.0 73 47.9
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 3.9e-08 62.0 69 49.3
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 6.6e-08 61.2 106 43.4
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 6.6e-08 61.2 127 35.4
Sed0014973 Sechium edule HOM05D003969 ORTHO05D003125 6.6e-08 61.2 118 39.8
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 8.6e-08 60.8 70 52.9
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 8.6e-08 60.8 122 36.1
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.1e-07 60.5 113 40.7
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 1.1e-07 60.5 73 42.5
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.9e-07 59.7 69 47.8
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 4.3e-07 58.5 131 35.1
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 4.3e-07 58.5 93 39.8
MELO3C030306.2 Cucumis melo HOM05D008824 ORTHO05D003125 5.6e-07 58.2 114 40.4
Gohir.A07G030200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 7.3e-07 57.8 71 50.7
Gohir.D07G034000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 7.3e-07 57.8 71 50.7
Gorai.001G035600 Gossypium raimondii HOM05D003969 ORTHO05D003125 7.3e-07 57.8 71 50.7
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 9.5e-07 57.4 68 48.5
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 9.5e-07 57.4 75 42.7
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 9.5e-07 57.4 121 35.5
Sc08g0005750 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.2e-06 57.0 119 39.5
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 1.2e-06 57.0 74 48.6
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.6e-06 56.6 117 36.8
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 1.6e-06 56.6 76 44.7
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 2.1e-06 56.2 91 37.4
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 2.1e-06 56.2 70 52.9
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 2.1e-06 56.2 117 36.8
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 2.1e-06 56.2 125 39.2
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 2.8e-06 55.8 124 35.5
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.8e-06 55.8 76 40.8
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 2.8e-06 55.8 71 43.7
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 2.8e-06 55.8 86 41.9
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 3.6e-06 55.5 120 35.0
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.6e-06 55.5 72 43.1
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 3.6e-06 55.5 72 43.1
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 4.7e-06 55.1 135 36.3
EL10Ac2g04157 Beta vulgaris HOM05D003969 ORTHO05D003125 4.7e-06 55.1 78 46.2
Prupe.1G486000 Prunus persica HOM05D019695 ORTHO05D022679 4.7e-06 55.1 126 40.5
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 4.7e-06 55.1 68 44.1
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 4.7e-06 55.1 78 38.5
ATR0629G091 Amborella trichopoda HOM05D003969 ORTHO05D003125 6.2e-06 54.7 114 36.0
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 6.2e-06 54.7 117 36.8
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 6.2e-06 54.7 66 50.0
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 8.1e-06 54.3 72 43.1


User provided reference genes

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