Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.7e-76 287.7 140 100.0
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.4e-72 275.4 140 97.1
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.6e-70 267.3 140 93.6
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.6e-66 255.4 140 91.4
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.7e-57 226.1 139 83.5
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.3e-53 211.8 132 84.8
Eucgr.C01690 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.7e-49 199.5 110 90.9
Eucgr.C01694 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.9e-48 196.1 129 81.4
Eucgr.C01698 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.3e-45 185.3 124 78.2
Eucgr.C01640 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.2e-34 150.2 88 85.2
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.5e-34 148.3 95 80.0
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 7.4e-13 77.8 145 39.3
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.1e-12 76.3 141 37.6
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.4e-11 73.6 145 37.2
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 2.4e-11 72.8 123 43.1
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 3.1e-11 72.4 121 42.1
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 9.0e-11 70.9 121 38.0
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.2e-10 70.5 144 37.5
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 2.0e-10 69.7 130 43.8
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.0e-10 69.7 145 34.5
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 5.9e-10 68.2 106 44.3
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 5.9e-10 68.2 85 50.6
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 5.9e-10 68.2 131 37.4
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 7.6e-10 67.8 73 49.3
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 7.6e-10 67.8 89 43.8
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 1.7e-09 66.6 105 42.9
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.7e-09 66.6 83 47.0
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 2.2e-09 66.2 117 40.2
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.2e-09 66.2 72 50.0
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 6.5e-09 64.7 121 40.5
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 6.5e-09 64.7 126 38.1
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 8.5e-09 64.3 130 36.2
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 8.5e-09 64.3 70 51.4
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 1.1e-08 63.9 126 40.5
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 1.1e-08 63.9 124 34.7
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 1.4e-08 63.5 134 39.6
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.5e-08 62.8 115 41.7
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 3.2e-08 62.4 72 48.6
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 4.2e-08 62.0 73 46.6
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 4.2e-08 62.0 94 44.7
Sed0014973 Sechium edule HOM05D003969 ORTHO05D003125 4.2e-08 62.0 121 38.0
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 5.5e-08 61.6 120 38.3
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 5.5e-08 61.6 113 37.2
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 7.2e-08 61.2 74 48.6
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.2e-07 60.5 101 40.6
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 1.2e-07 60.5 101 40.6
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.2e-07 60.5 124 37.1
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.2e-07 60.5 124 37.1
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 1.2e-07 60.5 70 48.6
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 1.6e-07 60.1 79 48.1
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.6e-07 60.1 95 37.9
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 1.6e-07 60.1 127 37.0
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 2.1e-07 59.7 113 39.8
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.1e-07 59.7 95 36.8
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.1e-07 59.7 121 35.5
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 2.7e-07 59.3 127 37.0
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.7e-07 59.3 87 40.2
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.7e-07 59.3 101 40.6
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 2.7e-07 59.3 95 36.8
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.6e-07 58.9 108 37.0
BcaNung01909 Brassica carinata HOM05D008824 ORTHO05D003125 4.6e-07 58.5 112 40.2
BcaNung01911 Brassica carinata HOM05D008824 ORTHO05D003125 4.6e-07 58.5 112 40.2
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 4.6e-07 58.5 72 45.8
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 4.6e-07 58.5 83 45.8
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 4.6e-07 58.5 83 45.8
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 4.6e-07 58.5 82 46.3
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 6.1e-07 58.2 125 36.8
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 6.1e-07 58.2 125 36.8
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 7.9e-07 57.8 70 47.1
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.0e-06 57.4 114 35.1
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 1.0e-06 57.4 124 33.9
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.3e-06 57.0 109 37.6
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 1.3e-06 57.0 79 46.8
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.3e-06 57.0 87 41.4
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 1.8e-06 56.6 115 37.4
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 1.8e-06 56.6 119 36.1
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 1.8e-06 56.6 95 42.1
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 2.3e-06 56.2 98 38.8
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 2.3e-06 56.2 71 42.3
Thhalv10016092m.g Eutrema salsugineum HOM05D008824 ORTHO05D003125 2.3e-06 56.2 132 37.9
HPP92_020075 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.3e-06 56.2 93 39.8
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 3.0e-06 55.8 70 44.3
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 3.0e-06 55.8 97 38.1
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 3.0e-06 55.8 97 38.1
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.0e-06 55.8 125 33.6
Gohir.D07G034000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.0e-06 55.8 82 46.3
Gorai.001G035600 Gossypium raimondii HOM05D003969 ORTHO05D003125 3.0e-06 55.8 82 46.3
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 3.0e-06 55.8 85 44.7
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 3.0e-06 55.8 98 39.8
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 3.9e-06 55.5 76 46.1
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 3.9e-06 55.5 106 35.8
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 3.9e-06 55.5 82 41.5
Lj5g0018030 Lotus japonicus HOM05D013068 ORTHO05D003125 3.9e-06 55.5 79 44.3
AT5G11070 Arabidopsis thaliana HOM05D008824 ORTHO05D003125 5.1e-06 55.1 114 37.7
Carub.0006s0958 Capsella rubella HOM05D008824 ORTHO05D003125 5.1e-06 55.1 94 42.6
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 5.1e-06 55.1 131 34.4
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 5.1e-06 55.1 75 48.0
Gohir.A07G030200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 5.1e-06 55.1 71 47.9
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 5.1e-06 55.1 119 39.5
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 5.1e-06 55.1 122 36.9
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 5.1e-06 55.1 55 56.4
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 5.1e-06 55.1 86 36.0
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 6.7e-06 54.7 84 46.4
Aa31LG3G16070 Aethionema arabicum HOM05D008824 ORTHO05D003125 6.7e-06 54.7 92 43.5
ATR0629G091 Amborella trichopoda HOM05D003969 ORTHO05D003125 6.7e-06 54.7 120 36.7
AL6G21690 Arabidopsis lyrata HOM05D008824 ORTHO05D003125 6.7e-06 54.7 90 42.2
BraA10t44721Z Brassica rapa HOM05D008824 ORTHO05D003125 6.7e-06 54.7 90 44.4
CANSAT01G2013 Cannabis sativa HOM05D008824 ORTHO05D003125 6.7e-06 54.7 80 43.8
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 6.7e-06 54.7 127 36.2
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 6.7e-06 54.7 119 37.8
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 6.7e-06 54.7 55 56.4
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 6.7e-06 54.7 70 45.7
BcaC04g19263 Brassica carinata HOM05D008824 ORTHO05D003125 8.7e-06 54.3 91 44.0
A10p26630 Brassica napus HOM05D008824 ORTHO05D003125 8.7e-06 54.3 91 44.0
C09p65790 Brassica napus HOM05D008824 ORTHO05D003125 8.7e-06 54.3 91 44.0
BolC9t59401H Brassica oleracea HOM05D008824 ORTHO05D003125 8.7e-06 54.3 91 44.0
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 8.7e-06 54.3 90 40.0
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 8.7e-06 54.3 99 36.4
Sc08g0005750 Simmondsia chinensis HOM05D003969 ORTHO05D003125 8.7e-06 54.3 150 34.0


User provided reference genes

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