Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01594 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.7e-69 265.8 126 100.0
Eucgr.J01243 Eucalyptus grandis HOM05D015495 ORTHO05D000309 1.4e-66 256.1 126 96.0
Eucgr.L01870 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.2e-50 201.1 103 92.2
Eucgr.G02031 Eucalyptus grandis HOM05D015495 ORTHO05D000309 2.3e-37 159.1 90 81.1
Eucgr.H03328 Eucalyptus grandis HOM05D015495 ORTHO05D000309 1.1e-36 156.8 90 80.0
Eucgr.L00906 Eucalyptus grandis HOM05D015495 ORTHO05D000309 1.6e-35 152.9 88 79.5
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 6.0e-14 81.3 92 38.0
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 7.9e-14 80.9 92 38.0
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 1.9e-12 76.3 112 33.9
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 1.9e-12 76.3 68 41.2
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 4.3e-12 75.1 64 50.0
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 5.6e-12 74.7 82 36.6
vmacro21229 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 7.4e-12 74.3 76 47.4
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 9.6e-12 73.9 64 51.6
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 1.3e-11 73.6 82 36.6
Peaxi162Scf00368g00111 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-11 73.2 79 38.0
Eucgr.J03169 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.2e-11 71.2 68 45.6
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 6.2e-11 71.2 67 40.3
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 6.2e-11 71.2 67 40.3
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 6.2e-11 71.2 67 40.3
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-10 70.1 84 33.3
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-10 70.1 71 36.6
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-10 69.7 83 37.3
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-10 69.7 83 37.3
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.1e-10 68.9 80 37.5
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.1e-10 68.9 94 34.0
Peaxi162Scf00465g00011 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-10 68.9 87 31.0
Peaxi162Scf01316g00007 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-10 68.9 87 31.0
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 4.0e-10 68.6 67 40.3
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.3e-10 68.2 77 39.0
Nitab4.5_0000625g0090 Nicotiana tabacum HOM05D001383 ORTHO05D000309 5.3e-10 68.2 67 38.8
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 6.9e-10 67.8 72 44.4
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.9e-10 67.8 77 39.0
Eucgr.C01434 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.9e-10 67.8 65 43.1
Peaxi162Scf00147g01910 Petunia axillaris HOM05D001383 ORTHO05D000309 6.9e-10 67.8 77 33.8
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.0e-10 67.4 77 40.3
Medtr8g070590 Medicago truncatula HOM05D001383 ORTHO05D000309 9.0e-10 67.4 85 37.6
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-09 67.0 74 39.2
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-09 67.0 80 37.5
Eucgr.D00216 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-09 67.0 77 37.7
Eucgr.H02341 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.5e-09 66.6 81 38.3
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.6e-09 65.9 80 36.2
Hma1.2p1_0230F.1_g097240 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.4e-09 65.5 80 37.5
Medtr1g039350 Medicago truncatula HOM05D001383 ORTHO05D000309 4.5e-09 65.1 68 36.8
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.8e-09 64.7 74 37.8
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.8e-09 64.7 74 37.8
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.8e-09 64.7 74 37.8
Nitab4.5_0002043g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 5.8e-09 64.7 67 38.8
COL.COLO4_13767 Corchorus olitorius HOM05D002127 ORTHO05D002274 9.9e-09 63.9 72 41.7
Eucgr.B01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.9e-09 63.9 60 41.7
Nitab4.5_0000620g0220 Nicotiana tabacum HOM05D001383 ORTHO05D000309 9.9e-09 63.9 67 38.8
Nitab4.5_0000270g0070 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.3e-08 63.5 66 37.9
Peaxi162Scf00063g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 1.3e-08 63.5 87 29.9
Peaxi162Scf00884g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 1.7e-08 63.2 79 30.4
Nitab4.5_0000073g0140 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.9e-08 62.4 66 37.9
Hma1.2p1_0012F.1_g007370 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.8e-08 62.0 76 36.8
Hma1.2p1_0013F.1_g009020 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.8e-08 62.0 76 36.8
Hma1.2p1_0013F.1_g009040 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.8e-08 62.0 76 36.8
Hma1.2p1_0013F.1_g009050 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.8e-08 62.0 76 36.8
Hma1.2p1_0013F.1_g009056 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.8e-08 62.0 76 36.8
Nitab4.5_0001650g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 3.8e-08 62.0 67 37.3
Eucgr.C01025 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.9e-08 61.6 88 34.1
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 6.4e-08 61.2 64 39.1
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 6.4e-08 61.2 71 42.3
Hma1.2p1_2466F.1_g322651 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.4e-08 61.2 73 38.4
Nitab4.5_0002145g0050 Nicotiana tabacum HOM05D001383 ORTHO05D000309 6.4e-08 61.2 67 37.3
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 6.4e-08 61.2 81 33.3
Eucgr.B01060 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.4e-08 60.8 80 36.2
Hma1.2p1_0825F.1_g224740 Hydrangea macrophylla HOM05D015331 ORTHO05D000309 8.4e-08 60.8 81 32.1
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 8.4e-08 60.8 70 35.7
Peaxi162Scf00075g00085 Petunia axillaris HOM05D001383 ORTHO05D000309 8.4e-08 60.8 68 35.3
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 8.4e-08 60.8 64 37.5
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 1.1e-07 60.5 67 41.8
Hma1.2p1_0013F.1_g009060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.1e-07 60.5 76 35.5
Eucgr.H00233 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.4e-07 60.1 80 36.2
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.4e-07 60.1 95 30.5
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-07 59.7 41 56.1
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-07 59.7 80 33.8
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-07 59.7 41 56.1
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-07 59.7 41 56.1
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-07 59.7 41 56.1
Hma1.2p1_0172F.1_g075980 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.9e-07 59.7 58 43.1
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-07 59.7 57 49.1
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.9e-07 59.7 80 35.0
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-07 59.7 64 35.9
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-07 59.3 66 37.9
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-07 59.3 62 38.7
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-07 59.3 66 36.4
Hma1.2p1_0289F.1_g114350 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.2e-07 58.9 56 44.6
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-07 58.9 64 37.5
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 4.2e-07 58.5 65 36.9
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.2e-07 58.5 68 36.8
Eucgr.H02949 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.2e-07 58.5 63 41.3
Nitab4.5_0001904g0050 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.2e-07 58.5 69 36.2
vmacro20312 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 4.2e-07 58.5 59 42.4
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 5.5e-07 58.2 99 30.3
Nitab4.5_0003987g0040 Nicotiana tabacum HOM05D001383 ORTHO05D000309 5.5e-07 58.2 67 35.8
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 7.1e-07 57.8 41 53.7
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 7.1e-07 57.8 41 53.7
DCAR_031437 Daucus carota HOM05D001383 ORTHO05D000309 7.1e-07 57.8 73 37.0
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.1e-07 57.8 71 38.0
Hma1.2p1_1224F.1_g268490 Hydrangea macrophylla HOM05D015331 ORTHO05D000309 7.1e-07 57.8 81 30.9
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 7.1e-07 57.8 59 47.5
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 7.1e-07 57.8 76 34.2
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 7.1e-07 57.8 67 41.8
SGA_v2.0_scaffold18G08221 Striga asiatica HOM05D012189 ORTHO05D000309 7.1e-07 57.8 78 35.9
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-07 57.4 74 35.1
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 9.3e-07 57.4 53 45.3
DCAR_017399 Daucus carota HOM05D001383 ORTHO05D000309 9.3e-07 57.4 58 43.1
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 9.3e-07 57.4 66 42.4
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-07 57.4 66 36.4
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-07 57.4 66 34.8
Peaxi162Scf00145g00107 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-07 57.4 58 43.1
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-07 57.4 66 36.4
Peaxi162Scf01021g00121 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-07 57.4 70 34.3
CiPaw.05G156600 Carya illinoinensis HOM05D015495 ORTHO05D024749 1.2e-06 57.0 105 33.3
Gohir.A13G041750 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.2e-06 57.0 69 36.2
Hma1.2p1_0198F.1_g085550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-06 57.0 81 32.1
Lj2P1210T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-06 57.0 49 51.0
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-06 57.0 57 47.4
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-06 56.6 82 40.2
DCAR_015783 Daucus carota HOM05D001383 ORTHO05D000309 1.6e-06 56.6 85 34.1
Migut.O00432 Erythranthe guttata HOM05D001383 ORTHO05D000309 1.6e-06 56.6 72 33.3
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 1.6e-06 56.6 94 34.0
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 56.6 70 34.3
Migut.E00885 Erythranthe guttata HOM05D001383 ORTHO05D000309 2.1e-06 56.2 59 33.9
Glyma.01G130300 Glycine max HOM05D001383 ORTHO05D000309 2.1e-06 56.2 58 41.4
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-06 56.2 42 54.8
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-06 56.2 42 54.8
Nitab4.5_0010443g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.1e-06 56.2 88 35.2
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 2.1e-06 56.2 66 34.8
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 69 36.2
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 60 40.0
COL.COLO4_30330 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.7e-06 55.8 99 29.3
Gohir.A08G119166 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.7e-06 55.8 68 36.8
Lsat_1_v5_gn_1_70380 Lactuca sativa HOM05D022384 ORTHO05D029975 2.7e-06 55.8 81 43.2
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 2.7e-06 55.8 55 40.0
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 55.8 57 47.4
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 55.8 57 45.6
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 55.8 57 47.4
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 55.8 57 47.4
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-06 55.5 87 32.2
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-06 55.5 42 54.8
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-06 55.5 42 54.8
Peaxi162Scf00323g00412 Petunia axillaris HOM05D001383 ORTHO05D000309 3.5e-06 55.5 66 34.8
Aqoxy1G03189 Aquilegia oxysepala HOM05D052364 ORTHO05D038503 4.6e-06 55.1 51 51.0
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 4.6e-06 55.1 81 35.8
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 4.6e-06 55.1 81 35.8
CiPaw.05G157100 Carya illinoinensis HOM05D015495 ORTHO05D024749 4.6e-06 55.1 61 41.0
Dinv12298 Davidia involucrata HOM05D001383 ORTHO05D000309 4.6e-06 55.1 87 33.3
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 4.6e-06 55.1 81 32.1
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.6e-06 55.1 64 39.1
Lsat_1_v5_gn_2_25761 Lactuca sativa HOM05D021679 ORTHO05D022849 4.6e-06 55.1 79 26.6
Lsat_1_v5_gn_5_71080 Lactuca sativa HOM05D021679 ORTHO05D022849 4.6e-06 55.1 79 26.6
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-06 55.1 42 54.8
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-06 55.1 49 51.0
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 4.6e-06 55.1 70 32.9
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 4.6e-06 55.1 58 43.1
Aqoxy7G03573 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 6.0e-06 54.7 77 32.5
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 6.0e-06 54.7 83 34.9
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 6.0e-06 54.7 58 43.1
SGA_v2.0_scaffold472G52098 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-06 54.7 70 38.6
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-06 54.7 64 39.1
Aqoxy7G02008 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 7.9e-06 54.3 74 32.4
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.9e-06 54.3 59 40.7
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 7.9e-06 54.3 58 43.1
VMungo1215G0338 Vigna mungo HOM05D002602 ORTHO05D002661 7.9e-06 54.3 45 51.1


User provided reference genes

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