Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01535 Eucalyptus grandis HOM05D002521 ORTHO05D002872 4.0e-79 298.1 162 100.0
Eucgr.C01180 Eucalyptus grandis HOM05D002521 ORTHO05D002872 4.9e-77 291.2 159 97.5
Dinv41505 Davidia involucrata HOM05D002521 ORTHO05D002872 1.5e-41 173.3 162 59.3
Dinv36521 Davidia involucrata HOM05D002521 ORTHO05D002872 2.5e-41 172.6 159 59.1
RcHm_v2.0_Chr2g0088311 Rosa chinensis HOM05D002521 ORTHO05D002872 3.4e-38 162.2 160 57.5
Haze_25569 Corylus avellana HOM05D002521 ORTHO05D002872 3.8e-37 158.7 161 54.7
MD02G1030800 Malus domestica HOM05D002521 ORTHO05D002872 8.5e-37 157.5 161 52.8
Cfa003383 Carpinus fangiana HOM05D002521 ORTHO05D002872 1.9e-36 156.4 161 55.3
FAN23G1776 Fragaria x ananassa HOM05D002521 ORTHO05D002872 9.4e-36 154.1 160 56.2
FAN28G2635 Fragaria x ananassa HOM05D002521 ORTHO05D002872 2.7e-35 152.5 160 56.2
FAN19G2354 Fragaria x ananassa HOM05D002521 ORTHO05D002872 4.7e-35 151.8 161 57.1
FvH4_1g03180 Fragaria vesca HOM05D002521 ORTHO05D002872 6.1e-35 151.4 161 55.9
CiPaw.03G244600 Carya illinoinensis HOM05D002521 ORTHO05D002872 1.4e-34 150.2 161 53.4
PGR142G3626 Punica granatum HOM05D002521 ORTHO05D002872 1.4e-34 150.2 160 57.5
Thecc.09G127200 Theobroma cacao HOM05D002521 ORTHO05D002872 8.8e-34 147.5 144 56.2
QL02p088596 Quercus lobata HOM05D002521 ORTHO05D002872 3.3e-33 145.6 165 54.5
Atru.chr7.1144 Acer truncatum HOM05D002521 ORTHO05D002872 2.8e-32 142.5 159 54.1
TWI34G2015 Tripterygium wilfordii HOM05D002521 ORTHO05D002872 4.8e-32 141.7 159 54.1
Ciclev10008229m.g Citrus clementina HOM05D002521 ORTHO05D002872 6.3e-32 141.4 158 53.2
COL.COLO4_35116 Corchorus olitorius HOM05D002521 ORTHO05D002872 1.1e-31 140.6 148 54.7
vmacro20562 Vaccinium macrocarpon HOM05D002521 ORTHO05D002872 1.4e-31 140.2 159 51.6
Nn8g39464 Nelumbo nucifera HOM05D002521 ORTHO05D002872 1.8e-31 139.8 159 49.1
Potri.018G131300 Populus trichocarpa HOM05D002521 ORTHO05D002872 1.8e-31 139.8 162 53.7
Actinidia21982 Actinidia chinensis HOM05D002521 ORTHO05D002872 3.1e-31 139.0 163 52.1
RhsimUnG0194100 Rhododendron simsii HOM05D002521 ORTHO05D002872 9.1e-31 137.5 159 50.3
Prupe.7G243700 Prunus persica HOM05D002521 ORTHO05D002872 2.6e-30 136.0 159 56.6
TAR636G2868 Trochodendron aralioides HOM05D002521 ORTHO05D002872 3.5e-30 135.6 159 47.2
Lj4g0016900 Lotus japonicus HOM05D002521 ORTHO05D002872 1.0e-29 134.0 162 50.0
Hma1.2p1_2881F.1_g329840 Hydrangea macrophylla HOM05D002521 ORTHO05D002872 2.2e-29 132.9 158 47.5
Duzib168G1193 Durio zibethinus HOM05D002521 ORTHO05D002872 8.5e-29 131.0 144 54.9
Manes.14G132800 Manihot esculenta HOM05D002521 ORTHO05D002872 1.9e-28 129.8 168 46.4
Actinidia40475 Actinidia chinensis HOM05D002521 ORTHO05D002872 3.2e-28 129.0 162 50.6
CANSAT11G2526 Cannabis sativa HOM05D002521 ORTHO05D002872 9.4e-28 127.5 164 48.2
Sc08g0006570 Simmondsia chinensis HOM05D002521 ORTHO05D002872 1.2e-27 127.1 164 50.0
Glyma.13G166600 Glycine max HOM05D002521 ORTHO05D002872 2.1e-27 126.3 161 47.2
Phvul.003G165100 Phaseolus vulgaris HOM05D002521 ORTHO05D002872 3.6e-27 125.6 161 47.8
VMungo1215G2698 Vigna mungo HOM05D002521 ORTHO05D002872 3.6e-27 125.6 161 48.4
Potri.006G069300 Populus trichocarpa HOM05D002521 ORTHO05D002872 3.0e-26 122.5 151 49.0
Sabra06G0195800 Salix brachista HOM05D002521 ORTHO05D002872 4.0e-26 122.1 152 47.4
Gohir.D05G017200 Gossypium hirsutum HOM05D002521 ORTHO05D002872 5.2e-26 121.7 144 49.3
Gorai.009G017400 Gossypium raimondii HOM05D002521 ORTHO05D002872 5.2e-26 121.7 144 49.3
Sabra06G0051700 Salix brachista HOM05D002521 ORTHO05D002872 1.1e-25 120.6 152 46.7
Gohir.A05G016100 Gossypium hirsutum HOM05D002521 ORTHO05D002872 1.5e-25 120.2 144 50.0
GSVIVG01015541001 Vitis vinifera HOM05D002521 ORTHO05D002872 5.7e-25 118.2 135 54.8
Cpa.g.sc332.4 Carica papaya HOM05D002521 ORTHO05D002872 6.3e-24 114.8 161 44.1
Psat4g039880 Pisum sativum HOM05D002521 ORTHO05D002872 8.2e-24 114.4 164 43.9
TPR.G26493 Trifolium pratense HOM05D002521 ORTHO05D002872 2.0e-22 109.8 164 45.1
arahy.Tifrunner.gnm1.ann1.7GI6SZ Arachis hypogaea HOM05D002521 ORTHO05D002872 5.9e-22 108.2 160 43.1
Ca_21676_v3 Cicer arietinum L. HOM05D002521 ORTHO05D002872 1.7e-21 106.7 163 43.6
Medtr4g114580 Medicago truncatula HOM05D002521 ORTHO05D002872 1.7e-21 106.7 161 44.1
Lj7C627G6 Lonicera japonica HOM05D000315 ORTHO05D001379 3.8e-21 105.5 178 42.1
arahy.Tifrunner.gnm1.ann1.12MM49 Arachis hypogaea HOM05D002521 ORTHO05D002872 6.5e-21 104.8 160 41.9
Cc06_g08430 Coffea canephora HOM05D002521 ORTHO05D002872 1.5e-20 103.6 165 45.5
Hund09247 Selenicereus undatus HOM05D002521 ORTHO05D002872 1.6e-19 100.1 161 43.5
AUR62011136 Chenopodium quinoa HOM05D002521 ORTHO05D002872 5.4e-15 85.1 159 37.7
Glyma.17G114400 Glycine max HOM05D002521 ORTHO05D002872 4.5e-14 82.0 161 38.5
QL11p053954 Quercus lobata HOM05D002521 ORTHO05D002872 7.7e-14 81.3 143 40.6
Sopen02g020470 Solanum pennellii HOM05D002521 ORTHO05D002872 7.7e-14 81.3 158 37.3
Solyc02g071420.4 Solanum lycopersicum HOM05D002521 ORTHO05D002872 5.0e-13 78.6 158 38.0
Nitab4.5_0004447g0020 Nicotiana tabacum HOM05D002521 ORTHO05D002872 6.5e-13 78.2 158 36.7
PGSC0003DMG400003080 Solanum tuberosum HOM05D002521 ORTHO05D002872 1.9e-12 76.6 158 37.3
EL10Ac8g18664 Beta vulgaris HOM05D002521 ORTHO05D002872 3.6e-11 72.4 63 58.7
AUR62013351 Chenopodium quinoa HOM05D002521 ORTHO05D002872 8.0e-11 71.2 160 37.5
Nitab4.5_0003714g0070 Nicotiana tabacum HOM05D002521 ORTHO05D002872 2.4e-07 59.7 157 29.9
Aqoxy7G03694 Aquilegia oxysepala HOM05D002521 ORTHO05D002872 2.0e-06 56.6 146 31.5


User provided reference genes

Program Settings